Protein–RNA interactions for Protein: Q6ZMN7

PDZRN4, PDZ domain-containing RING finger protein 4, humanhuman

Predicted RBP Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4Q6ZMN7 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PDZRN4Q6ZMN7 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PDZRN4Q6ZMN7 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDZRN4Q6ZMN7 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDZRN4Q6ZMN7 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDZRN4Q6ZMN7 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.99■□□□□ 0.63
PDZRN4Q6ZMN7 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.99■□□□□ 0.63
PDZRN4Q6ZMN7 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDZRN4Q6ZMN7 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.99■□□□□ 0.63
PDZRN4Q6ZMN7 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDZRN4Q6ZMN7 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDZRN4Q6ZMN7 PMS2P1-201ENST00000431037 1228 ntBASIC18.99■□□□□ 0.63
PDZRN4Q6ZMN7 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.99■□□□□ 0.63
PDZRN4Q6ZMN7 AC122714.2-201ENST00000502787 707 ntBASIC18.99■□□□□ 0.63
PDZRN4Q6ZMN7 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.99■□□□□ 0.63
PDZRN4Q6ZMN7 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.99■□□□□ 0.63
PDZRN4Q6ZMN7 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.99■□□□□ 0.63
PDZRN4Q6ZMN7 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.99■□□□□ 0.63
PDZRN4Q6ZMN7 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.99■□□□□ 0.63
PDZRN4Q6ZMN7 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.99■□□□□ 0.63
PDZRN4Q6ZMN7 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.99■□□□□ 0.63
PDZRN4Q6ZMN7 AC023511.2-201ENST00000618803 211 ntBASIC18.99■□□□□ 0.63
PDZRN4Q6ZMN7 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDZRN4Q6ZMN7 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDZRN4Q6ZMN7 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDZRN4Q6ZMN7 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDZRN4Q6ZMN7 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDZRN4Q6ZMN7 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDZRN4Q6ZMN7 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDZRN4Q6ZMN7 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
PDZRN4Q6ZMN7 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDZRN4Q6ZMN7 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDZRN4Q6ZMN7 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDZRN4Q6ZMN7 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
PDZRN4Q6ZMN7 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDZRN4Q6ZMN7 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PDZRN4Q6ZMN7 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDZRN4Q6ZMN7 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC18.98■□□□□ 0.63
PDZRN4Q6ZMN7 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC18.98■□□□□ 0.63
PDZRN4Q6ZMN7 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
PDZRN4Q6ZMN7 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC18.98■□□□□ 0.63
PDZRN4Q6ZMN7 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PDZRN4Q6ZMN7 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDZRN4Q6ZMN7 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PDZRN4Q6ZMN7 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PDZRN4Q6ZMN7 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDZRN4Q6ZMN7 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDZRN4Q6ZMN7 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PDZRN4Q6ZMN7 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
PDZRN4Q6ZMN7 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.98■□□□□ 0.63
PDZRN4Q6ZMN7 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PDZRN4Q6ZMN7 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDZRN4Q6ZMN7 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.98■□□□□ 0.63
PDZRN4Q6ZMN7 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.98■□□□□ 0.63
PDZRN4Q6ZMN7 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.98■□□□□ 0.63
PDZRN4Q6ZMN7 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
PDZRN4Q6ZMN7 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PDZRN4Q6ZMN7 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDZRN4Q6ZMN7 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.98■□□□□ 0.63
PDZRN4Q6ZMN7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDZRN4Q6ZMN7 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PDZRN4Q6ZMN7 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDZRN4Q6ZMN7 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDZRN4Q6ZMN7 SNX18-202ENST00000343017 3140 ntBASIC18.98■□□□□ 0.63
PDZRN4Q6ZMN7 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC18.98■□□□□ 0.63
PDZRN4Q6ZMN7 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.98■□□□□ 0.63
PDZRN4Q6ZMN7 AC010460.3-201ENST00000511359 1579 ntBASIC18.98■□□□□ 0.63
PDZRN4Q6ZMN7 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDZRN4Q6ZMN7 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDZRN4Q6ZMN7 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PDZRN4Q6ZMN7 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDZRN4Q6ZMN7 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC18.97■□□□□ 0.63
PDZRN4Q6ZMN7 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PDZRN4Q6ZMN7 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDZRN4Q6ZMN7 HLA-A-202ENST00000376806 1854 ntBASIC18.97■□□□□ 0.63
PDZRN4Q6ZMN7 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDZRN4Q6ZMN7 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDZRN4Q6ZMN7 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC18.97■□□□□ 0.63
PDZRN4Q6ZMN7 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDZRN4Q6ZMN7 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDZRN4Q6ZMN7 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.97■□□□□ 0.63
PDZRN4Q6ZMN7 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.97■□□□□ 0.63
PDZRN4Q6ZMN7 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.97■□□□□ 0.63
PDZRN4Q6ZMN7 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PDZRN4Q6ZMN7 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PDZRN4Q6ZMN7 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDZRN4Q6ZMN7 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.97■□□□□ 0.63
PDZRN4Q6ZMN7 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.97■□□□□ 0.63
PDZRN4Q6ZMN7 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.97■□□□□ 0.63
PDZRN4Q6ZMN7 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDZRN4Q6ZMN7 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PDZRN4Q6ZMN7 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDZRN4Q6ZMN7 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PDZRN4Q6ZMN7 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
PDZRN4Q6ZMN7 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
PDZRN4Q6ZMN7 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDZRN4Q6ZMN7 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDZRN4Q6ZMN7 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDZRN4Q6ZMN7 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDZRN4Q6ZMN7 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms