RNA–Protein interactions for RNA: ENST00000267502.3

RDH12-201, Transcript of retinol dehydrogenase 12, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RDH12, Length 1,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH12-201ENST00000267502 NISCHQ9Y2I1 1504 aa39.23■■■■□ 3.87
RDH12-201ENST00000267502 CCDC180Q9P1Z9 1646 aa34.3■■■■□ 3.08
RDH12-201ENST00000267502 ZCCHC6Q5VYS8 1495 aaKnown RBP32.99■■■□□ 2.87
RDH12-201ENST00000267502 DCAF1Q9Y4B6 1507 aa32.45■■■□□ 2.79
RDH12-201ENST00000267502 DCAF8L2P0C7V8 631 aa32.35■■■□□ 2.77
RDH12-201ENST00000267502 ABCC9O60706 1549 aa32.32■■■□□ 2.76
RDH12-201ENST00000267502 MYO15BQ96JP2 1530 aa32.06■■■□□ 2.72
RDH12-201ENST00000267502 SHROOM4Q9ULL8 1493 aa32.01■■■□□ 2.71
RDH12-201ENST00000267502 NACADO15069 1562 aa31.89■■■□□ 2.69
RDH12-201ENST00000267502 RB1CC1Q8TDY2 1594 aa31.63■■■□□ 2.65
RDH12-201ENST00000267502 SCRIBQ14160 1630 aa31.51■■■□□ 2.64
RDH12-201ENST00000267502 UNC13AQ9UPW8 1703 aa31.04■■■□□ 2.56
RDH12-201ENST00000267502 SUPT5HO00267 1087 aaKnown RBP30.8■■■□□ 2.52
RDH12-201ENST00000267502 BICRAQ9NZM4 1560 aa30.63■■■□□ 2.49
RDH12-201ENST00000267502 CECR2Q9BXF3 1484 aa30.45■■■□□ 2.47
RDH12-201ENST00000267502 PABPN1Q86U42 306 aaKnown RBP eCLIP30.43■■■□□ 2.46
RDH12-201ENST00000267502 RSF1Q96T23 1441 aaPredicted RBP30.41■■■□□ 2.46
RDH12-201ENST00000267502 BAZ1AQ9NRL2 1556 aaPredicted RBP30.33■■■□□ 2.45
RDH12-201ENST00000267502 MROH2BQ7Z745 1585 aa30.31■■■□□ 2.44
RDH12-201ENST00000267502 SMARCA4P51532 1647 aa30.21■■■□□ 2.43
RDH12-201ENST00000267502 WIZO95785 1651 aa30.11■■■□□ 2.41
RDH12-201ENST00000267502 PEG3Q9GZU2 1588 aa29.81■■■□□ 2.36
RDH12-201ENST00000267502 TOP2AP11388 1531 aaKnown RBP29.8■■■□□ 2.36
RDH12-201ENST00000267502 EIF4G1Q04637 1599 aaKnown RBP29.72■■■□□ 2.35
RDH12-201ENST00000267502 SMARCA2P51531 1590 aa29.69■■■□□ 2.34
RDH12-201ENST00000267502 ATAD2BQ9ULI0 1458 aa29.64■■■□□ 2.34
RDH12-201ENST00000267502 BAZ1BQ9UIG0 1483 aaKnown RBP29.52■■■□□ 2.32
RDH12-201ENST00000267502 CHIC1Q5VXU3 224 aa29.45■■■□□ 2.31
RDH12-201ENST00000267502 CCDC88BA6NC98 1476 aa29.43■■■□□ 2.3
RDH12-201ENST00000267502 HMGXB3Q12766 1538 aa29.4■■■□□ 2.3
RDH12-201ENST00000267502 NCAPD3P42695 1498 aa29.37■■■□□ 2.29
RDH12-201ENST00000267502 CC2D2AQ9P2K1 1620 aa29.28■■■□□ 2.28
RDH12-201ENST00000267502 TRIM41Q8WV44 630 aa28.96■■■□□ 2.23
RDH12-201ENST00000267502 ABCC8Q09428 1581 aa28.87■■■□□ 2.21
RDH12-201ENST00000267502 PRDM2Q13029 1718 aa28.76■■■□□ 2.19
RDH12-201ENST00000267502 CFTRP13569 1480 aa28.74■■■□□ 2.19
RDH12-201ENST00000267502 WRNQ14191 1432 aaPredicted RBP eCLIP28.66■■■□□ 2.18
RDH12-201ENST00000267502 CADPSQ9ULU8 1353 aa28.61■■■□□ 2.17
RDH12-201ENST00000267502 SYNJ1O43426 1573 aa28.57■■■□□ 2.16
RDH12-201ENST00000267502 TOP2BQ02880 1626 aa28.47■■■□□ 2.15
RDH12-201ENST00000267502 BIVM-ERCC5R4GMW8 1640 aa28.46■■■□□ 2.15
RDH12-201ENST00000267502 LAMC3Q9Y6N6 1575 aa28.44■■■□□ 2.14
RDH12-201ENST00000267502 FAM9AQ8IZU1 332 aaPredicted RBP28.42■■■□□ 2.14
RDH12-201ENST00000267502 DNAJC5BQ9UF47 199 aa28.38■■■□□ 2.13
RDH12-201ENST00000267502 NESP48681 1621 aa28.37■■■□□ 2.13
RDH12-201ENST00000267502 CUX1P39880 1505 aa28.35■■■□□ 2.13
RDH12-201ENST00000267502 FANCD2Q9BXW9 1451 aa28.34■■■□□ 2.13
RDH12-201ENST00000267502 LOC105371045A0A1W2PR82 267 aa28.32■■■□□ 2.12
RDH12-201ENST00000267502 EEA1Q15075 1411 aa28.29■■■□□ 2.12
RDH12-201ENST00000267502 SOGA1O94964 1423 aa28.28■■■□□ 2.12
RDH12-201ENST00000267502 CEP164Q9UPV0 1460 aa28.18■■■□□ 2.1
RDH12-201ENST00000267502 PDS5BQ9NTI5 1447 aa28.17■■■□□ 2.1
RDH12-201ENST00000267502 RUSC2Q8N2Y8 1516 aa28.17■■■□□ 2.1
RDH12-201ENST00000267502 KIF21AQ7Z4S6 1674 aa28.13■■■□□ 2.09
RDH12-201ENST00000267502 DNMBPQ6XZF7 1577 aa28.13■■■□□ 2.09
RDH12-201ENST00000267502 CSRNP3Q8WYN3 585 aa28.06■■■□□ 2.08
RDH12-201ENST00000267502 FGD5Q6ZNL6 1462 aa28.05■■■□□ 2.08
RDH12-201ENST00000267502 TOPBP1Q92547 1522 aa28.04■■■□□ 2.08
RDH12-201ENST00000267502 EHMT2Q96KQ7 1210 aa28.03■■■□□ 2.08
RDH12-201ENST00000267502 URB2Q14146 1524 aaKnown RBP27.97■■■□□ 2.07
RDH12-201ENST00000267502 KIF21BO75037 1637 aa27.95■■■□□ 2.06
RDH12-201ENST00000267502 KIF27Q86VH2 1401 aa27.94■■■□□ 2.06
RDH12-201ENST00000267502 POLA1P09884 1462 aaPredicted RBP27.91■■■□□ 2.06
RDH12-201ENST00000267502 GOLGA3Q08378 1498 aa27.9■■■□□ 2.06
RDH12-201ENST00000267502 CUX2O14529 1486 aa27.86■■■□□ 2.05
RDH12-201ENST00000267502 MRC2Q9UBG0 1479 aa27.83■■■□□ 2.05
RDH12-201ENST00000267502 ABCA10Q8WWZ4 1543 aa27.79■■■□□ 2.04
RDH12-201ENST00000267502 RAD54L2Q9Y4B4 1467 aa27.79■■■□□ 2.04
RDH12-201ENST00000267502 WDR97A6NE52 1622 aa27.78■■■□□ 2.04
RDH12-201ENST00000267502 TNIKQ9UKE5 1360 aa27.77■■■□□ 2.04
RDH12-201ENST00000267502 ERICH3Q5RHP9 1530 aa27.75■■■□□ 2.03
RDH12-201ENST00000267502 ERCC6Q03468 1493 aa27.75■■■□□ 2.03
RDH12-201ENST00000267502 UBTFP17480 764 aaKnown RBP27.74■■■□□ 2.03
RDH12-201ENST00000267502 PRXQ9BXM0 1461 aa27.73■■■□□ 2.03
RDH12-201ENST00000267502 RAPGEF2Q9Y4G8 1499 aa27.73■■■□□ 2.03
RDH12-201ENST00000267502 WDR62O43379 1518 aa27.7■■■□□ 2.02
RDH12-201ENST00000267502 CEP162Q5TB80 1403 aa27.66■■■□□ 2.02
RDH12-201ENST00000267502 TARBP1Q13395 1621 aaKnown RBP27.64■■■□□ 2.01
RDH12-201ENST00000267502 THOC2Q8NI27 1593 aaKnown RBP27.63■■■□□ 2.01
RDH12-201ENST00000267502 IGF1RP08069 1367 aa27.62■■■□□ 2.01
RDH12-201ENST00000267502 ABCA5Q8WWZ7 1642 aa27.61■■■□□ 2.01
RDH12-201ENST00000267502 CUL7Q14999 1698 aa27.55■■■□□ 2
RDH12-201ENST00000267502 CARMIL1Q5VZK9 1371 aa27.52■■■□□ 2
RDH12-201ENST00000267502 GAPVD1Q14C86 1478 aa27.51■■□□□ 1.99
RDH12-201ENST00000267502 TDRD9Q8NDG6 1382 aaKnown RBP27.49■■□□□ 1.99
RDH12-201ENST00000267502 IFT140Q96RY7 1462 aa27.48■■□□□ 1.99
RDH12-201ENST00000267502 PBRM1Q86U86 1689 aa27.45■■□□□ 1.99
RDH12-201ENST00000267502 CLIP1P30622 1438 aa27.44■■□□□ 1.98
RDH12-201ENST00000267502 AQRO60306 1485 aaKnown RBP eCLIP27.33■■□□□ 1.97
RDH12-201ENST00000267502 ZNF608Q9ULD9 1512 aaPredicted RBP27.31■■□□□ 1.96
RDH12-201ENST00000267502 EIF4G3O43432 1585 aaKnown RBP27.3■■□□□ 1.96
RDH12-201ENST00000267502 GRIN2BQ13224 1484 aa27.29■■□□□ 1.96
RDH12-201ENST00000267502 CTTNBP2Q8WZ74 1663 aa27.29■■□□□ 1.96
RDH12-201ENST00000267502 RANGAP1P46060 587 aaPredicted RBP27.27■■□□□ 1.96
RDH12-201ENST00000267502 ADAMTS12P58397 1594 aa27.25■■□□□ 1.95
RDH12-201ENST00000267502 FHAD1B1AJZ9 1412 aa27.2■■□□□ 1.95
RDH12-201ENST00000267502 VPS8Q8N3P4 1428 aa27.2■■□□□ 1.95
RDH12-201ENST00000267502 ARAP1Q96P48 1450 aa27.16■■□□□ 1.94
RDH12-201ENST00000267502 ARHGAP35Q9NRY4 1499 aa27.15■■□□□ 1.94
RDH12-201ENST00000267502 SNAPC4Q5SXM2 1469 aa27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms