RNA–Protein interactions for RNA: ENST00000538448.5

HCK-209, Transcript of HCK proto-oncogene, Src family tyrosine kinase, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HCK, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCK-209ENST00000538448 NISCHQ9Y2I1 1504 aa32.59■■■□□ 2.81
HCK-209ENST00000538448 CCDC180Q9P1Z9 1646 aa29.08■■■□□ 2.25
HCK-209ENST00000538448 ABCC9O60706 1549 aa28.87■■■□□ 2.21
HCK-209ENST00000538448 RB1CC1Q8TDY2 1594 aa27.53■■■□□ 2
HCK-209ENST00000538448 DCAF8L2P0C7V8 631 aa27.42■■□□□ 1.98
HCK-209ENST00000538448 NACADO15069 1562 aa27.4■■□□□ 1.98
HCK-209ENST00000538448 ZCCHC6Q5VYS8 1495 aaKnown RBP27.33■■□□□ 1.97
HCK-209ENST00000538448 MYO15BQ96JP2 1530 aa27.08■■□□□ 1.93
HCK-209ENST00000538448 UNC13AQ9UPW8 1703 aa27.08■■□□□ 1.93
HCK-209ENST00000538448 SHROOM4Q9ULL8 1493 aa27.02■■□□□ 1.92
HCK-209ENST00000538448 PABPN1Q86U42 306 aaKnown RBP eCLIP26.96■■□□□ 1.91
HCK-209ENST00000538448 DNAJC5BQ9UF47 199 aa26.89■■□□□ 1.89
HCK-209ENST00000538448 DCAF1Q9Y4B6 1507 aa26.87■■□□□ 1.89
HCK-209ENST00000538448 BICRAQ9NZM4 1560 aa26.81■■□□□ 1.88
HCK-209ENST00000538448 SCRIBQ14160 1630 aa26.59■■□□□ 1.85
HCK-209ENST00000538448 SUPT5HO00267 1087 aaKnown RBP26.2■■□□□ 1.79
HCK-209ENST00000538448 CC2D2AQ9P2K1 1620 aa26.09■■□□□ 1.77
HCK-209ENST00000538448 EIF4G1Q04637 1599 aaKnown RBP26.08■■□□□ 1.77
HCK-209ENST00000538448 CECR2Q9BXF3 1484 aa25.93■■□□□ 1.74
HCK-209ENST00000538448 HRCP23327 699 aa25.67■■□□□ 1.7
HCK-209ENST00000538448 RSF1Q96T23 1441 aaPredicted RBP25.38■■□□□ 1.65
HCK-209ENST00000538448 SMARCA4P51532 1647 aa25.37■■□□□ 1.65
HCK-209ENST00000538448 NCAPD3P42695 1498 aa25.31■■□□□ 1.64
HCK-209ENST00000538448 ATAD2BQ9ULI0 1458 aa25.31■■□□□ 1.64
HCK-209ENST00000538448 CHIC1Q5VXU3 224 aa25.28■■□□□ 1.64
HCK-209ENST00000538448 BAZ1AQ9NRL2 1556 aaPredicted RBP25.24■■□□□ 1.63
HCK-209ENST00000538448 SMARCA2P51531 1590 aa25.2■■□□□ 1.63
HCK-209ENST00000538448 MROH2BQ7Z745 1585 aa25.17■■□□□ 1.62
HCK-209ENST00000538448 HMGXB3Q12766 1538 aa25.14■■□□□ 1.61
HCK-209ENST00000538448 PEG3Q9GZU2 1588 aa25.08■■□□□ 1.61
HCK-209ENST00000538448 BAZ1BQ9UIG0 1483 aaKnown RBP25.05■■□□□ 1.6
HCK-209ENST00000538448 PCGF6Q9BYE7 350 aa25.01■■□□□ 1.59
HCK-209ENST00000538448 WIZO95785 1651 aa25■■□□□ 1.59
HCK-209ENST00000538448 NESP48681 1621 aa24.92■■□□□ 1.58
HCK-209ENST00000538448 PPARGC1BQ86YN6 1023 aaKnown RBP24.85■■□□□ 1.57
HCK-209ENST00000538448 ERCC6Q03468 1493 aa24.83■■□□□ 1.57
HCK-209ENST00000538448 LAMC3Q9Y6N6 1575 aa24.69■■□□□ 1.54
HCK-209ENST00000538448 CUX2O14529 1486 aa24.66■■□□□ 1.54
HCK-209ENST00000538448 TOP2AP11388 1531 aaKnown RBP24.63■■□□□ 1.53
HCK-209ENST00000538448 KIF21AQ7Z4S6 1674 aa24.61■■□□□ 1.53
HCK-209ENST00000538448 THOC2Q8NI27 1593 aaKnown RBP24.56■■□□□ 1.52
HCK-209ENST00000538448 CADPSQ9ULU8 1353 aa24.56■■□□□ 1.52
HCK-209ENST00000538448 PELP1Q8IZL8 1130 aaKnown RBP24.55■■□□□ 1.52
HCK-209ENST00000538448 TRIM26Q12899 539 aaPredicted RBP24.51■■□□□ 1.51
HCK-209ENST00000538448 TRIM41Q8WV44 630 aa24.51■■□□□ 1.51
HCK-209ENST00000538448 PDS5BQ9NTI5 1447 aa24.51■■□□□ 1.51
HCK-209ENST00000538448 CCDC88BA6NC98 1476 aa24.45■■□□□ 1.51
HCK-209ENST00000538448 LOC105371045A0A1W2PR82 267 aa24.44■■□□□ 1.5
HCK-209ENST00000538448 DNAJC5Q9H3Z4 198 aa24.36■■□□□ 1.49
HCK-209ENST00000538448 CFTRP13569 1480 aa24.35■■□□□ 1.49
HCK-209ENST00000538448 ZEB1P37275 1124 aaPredicted RBP24.34■■□□□ 1.49
HCK-209ENST00000538448 MRC2Q9UBG0 1479 aa24.31■■□□□ 1.48
HCK-209ENST00000538448 FANCD2Q9BXW9 1451 aa24.3■■□□□ 1.48
HCK-209ENST00000538448 CEP164Q9UPV0 1460 aa24.28■■□□□ 1.48
HCK-209ENST00000538448 WDR62O43379 1518 aa24.26■■□□□ 1.47
HCK-209ENST00000538448 FAM9AQ8IZU1 332 aaPredicted RBP24.2■■□□□ 1.47
HCK-209ENST00000538448 PRDM2Q13029 1718 aa24.19■■□□□ 1.46
HCK-209ENST00000538448 ABCC8Q09428 1581 aa24.19■■□□□ 1.46
HCK-209ENST00000538448 URB2Q14146 1524 aaKnown RBP24.12■■□□□ 1.45
HCK-209ENST00000538448 SCAF1Q9H7N4 1312 aaKnown RBP24.04■■□□□ 1.44
HCK-209ENST00000538448 EHMT2Q96KQ7 1210 aa23.95■■□□□ 1.42
HCK-209ENST00000538448 TOPBP1Q92547 1522 aa23.89■■□□□ 1.41
HCK-209ENST00000538448 WRNQ14191 1432 aaPredicted RBP eCLIP23.86■■□□□ 1.41
HCK-209ENST00000538448 SOGA1O94964 1423 aa23.82■■□□□ 1.4
HCK-209ENST00000538448 DNMBPQ6XZF7 1577 aa23.81■■□□□ 1.4
HCK-209ENST00000538448 SYNJ1O43426 1573 aa23.8■■□□□ 1.4
HCK-209ENST00000538448 ZNF608Q9ULD9 1512 aaPredicted RBP23.79■■□□□ 1.4
HCK-209ENST00000538448 IFT140Q96RY7 1462 aa23.77■■□□□ 1.4
HCK-209ENST00000538448 RUSC2Q8N2Y8 1516 aa23.73■■□□□ 1.39
HCK-209ENST00000538448 TARBP1Q13395 1621 aaKnown RBP23.68■■□□□ 1.38
HCK-209ENST00000538448 EEA1Q15075 1411 aa23.67■■□□□ 1.38
HCK-209ENST00000538448 POLA1P09884 1462 aaPredicted RBP23.66■■□□□ 1.38
HCK-209ENST00000538448 EIF4G3O43432 1585 aaKnown RBP23.64■■□□□ 1.38
HCK-209ENST00000538448 RAD54L2Q9Y4B4 1467 aa23.62■■□□□ 1.37
HCK-209ENST00000538448 CUX1P39880 1505 aa23.61■■□□□ 1.37
HCK-209ENST00000538448 OSCARQ8IYS5 282 aa23.61■■□□□ 1.37
HCK-209ENST00000538448 CSRNP3Q8WYN3 585 aa23.61■■□□□ 1.37
HCK-209ENST00000538448 ACIN1Q9UKV3 1341 aaKnown RBP23.61■■□□□ 1.37
HCK-209ENST00000538448 AQRO60306 1485 aaKnown RBP eCLIP23.6■■□□□ 1.37
HCK-209ENST00000538448 TOP2BQ02880 1626 aa23.6■■□□□ 1.37
HCK-209ENST00000538448 MYT1Q01538 1121 aa23.59■■□□□ 1.37
HCK-209ENST00000538448 FGD5Q6ZNL6 1462 aa23.56■■□□□ 1.36
HCK-209ENST00000538448 BIVM-ERCC5R4GMW8 1640 aa23.55■■□□□ 1.36
HCK-209ENST00000538448 TDRD9Q8NDG6 1382 aaKnown RBP23.5■■□□□ 1.35
HCK-209ENST00000538448 TNIKQ9UKE5 1360 aa23.47■■□□□ 1.35
HCK-209ENST00000538448 CHD1O14646 1710 aa23.46■■□□□ 1.35
HCK-209ENST00000538448 NEUROD1Q13562 356 aa23.45■■□□□ 1.35
HCK-209ENST00000538448 GOLGA3Q08378 1498 aa23.45■■□□□ 1.35
HCK-209ENST00000538448 CEP162Q5TB80 1403 aa23.45■■□□□ 1.34
HCK-209ENST00000538448 KIF21BO75037 1637 aa23.42■■□□□ 1.34
HCK-209ENST00000538448 WDR97A6NE52 1622 aa23.41■■□□□ 1.34
HCK-209ENST00000538448 UBTFP17480 764 aaKnown RBP23.4■■□□□ 1.34
HCK-209ENST00000538448 FBLN2P98095 1184 aa23.36■■□□□ 1.33
HCK-209ENST00000538448 SNAPC4Q5SXM2 1469 aa23.35■■□□□ 1.33
HCK-209ENST00000538448 RIMBP3CA6NJZ7 1639 aa23.34■■□□□ 1.33
HCK-209ENST00000538448 RIMBP3BA6NNM3 1639 aa23.34■■□□□ 1.33
HCK-209ENST00000538448 RIMBP3Q9UFD9 1639 aa23.34■■□□□ 1.33
HCK-209ENST00000538448 CENPBP07199 599 aaPredicted RBP23.32■■□□□ 1.32
HCK-209ENST00000538448 PBRM1Q86U86 1689 aa23.29■■□□□ 1.32
HCK-209ENST00000538448 RAPGEF2Q9Y4G8 1499 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms