RNA–Protein interactions for RNA: ENST00000302392.4

TMEM42-201, Transcript of transmembrane protein 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM42, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM42-201ENST00000302392 NISCHQ9Y2I1 1504 aa44.07■■■■■ 4.65
TMEM42-201ENST00000302392 ABCC9O60706 1549 aa40.59■■■■■ 4.09
TMEM42-201ENST00000302392 CCDC180Q9P1Z9 1646 aa39.98■■■■□ 3.99
TMEM42-201ENST00000302392 DNAJC5BQ9UF47 199 aa38.6■■■■□ 3.77
TMEM42-201ENST00000302392 RB1CC1Q8TDY2 1594 aa38.36■■■■□ 3.73
TMEM42-201ENST00000302392 NACADO15069 1562 aa37.89■■■■□ 3.66
TMEM42-201ENST00000302392 PABPN1Q86U42 306 aaKnown RBP eCLIP37.58■■■■□ 3.61
TMEM42-201ENST00000302392 UNC13AQ9UPW8 1703 aa37.54■■■■□ 3.6
TMEM42-201ENST00000302392 DCAF8L2P0C7V8 631 aa37.38■■■■□ 3.57
TMEM42-201ENST00000302392 BICRAQ9NZM4 1560 aa37.25■■■■□ 3.55
TMEM42-201ENST00000302392 MYO15BQ96JP2 1530 aa37.12■■■■□ 3.53
TMEM42-201ENST00000302392 SHROOM4Q9ULL8 1493 aa36.72■■■■□ 3.47
TMEM42-201ENST00000302392 CC2D2AQ9P2K1 1620 aa36.67■■■■□ 3.46
TMEM42-201ENST00000302392 CECR2Q9BXF3 1484 aa36.65■■■■□ 3.46
TMEM42-201ENST00000302392 ZCCHC6Q5VYS8 1495 aaKnown RBP36.42■■■■□ 3.42
TMEM42-201ENST00000302392 EIF4G1Q04637 1599 aaKnown RBP36.41■■■■□ 3.42
TMEM42-201ENST00000302392 DCAF1Q9Y4B6 1507 aa36.38■■■■□ 3.41
TMEM42-201ENST00000302392 SCRIBQ14160 1630 aa36.35■■■■□ 3.41
TMEM42-201ENST00000302392 DNAJC5Q9H3Z4 198 aa36■■■■□ 3.35
TMEM42-201ENST00000302392 CUX2O14529 1486 aa35.33■■■■□ 3.25
TMEM42-201ENST00000302392 ERCC6Q03468 1493 aa35.13■■■■□ 3.21
TMEM42-201ENST00000302392 NCAPD3P42695 1498 aa34.93■■■■□ 3.18
TMEM42-201ENST00000302392 ATAD2BQ9ULI0 1458 aa34.75■■■■□ 3.15
TMEM42-201ENST00000302392 HMGXB3Q12766 1538 aa34.71■■■■□ 3.15
TMEM42-201ENST00000302392 SMARCA2P51531 1590 aa34.66■■■■□ 3.14
TMEM42-201ENST00000302392 NESP48681 1621 aa34.66■■■■□ 3.14
TMEM42-201ENST00000302392 SMARCA4P51532 1647 aa34.59■■■■□ 3.13
TMEM42-201ENST00000302392 THOC2Q8NI27 1593 aaKnown RBP34.55■■■■□ 3.12
TMEM42-201ENST00000302392 BAZ1BQ9UIG0 1483 aaKnown RBP34.41■■■■□ 3.1
TMEM42-201ENST00000302392 LAMC3Q9Y6N6 1575 aa34.35■■■■□ 3.09
TMEM42-201ENST00000302392 BAZ1AQ9NRL2 1556 aaPredicted RBP34.29■■■■□ 3.08
TMEM42-201ENST00000302392 KIF21AQ7Z4S6 1674 aa34.28■■■■□ 3.08
TMEM42-201ENST00000302392 PEG3Q9GZU2 1588 aa34.24■■■■□ 3.07
TMEM42-201ENST00000302392 TRIM41Q8WV44 630 aa34.17■■■■□ 3.06
TMEM42-201ENST00000302392 PDS5BQ9NTI5 1447 aa34.12■■■■□ 3.05
TMEM42-201ENST00000302392 MROH2BQ7Z745 1585 aa33.95■■■■□ 3.03
TMEM42-201ENST00000302392 MRC2Q9UBG0 1479 aa33.91■■■■□ 3.02
TMEM42-201ENST00000302392 WDR62O43379 1518 aa33.87■■■■□ 3.01
TMEM42-201ENST00000302392 CADPSQ9ULU8 1353 aa33.83■■■■□ 3.01
TMEM42-201ENST00000302392 CEP164Q9UPV0 1460 aa33.63■■■□□ 2.97
TMEM42-201ENST00000302392 WIZO95785 1651 aa33.54■■■□□ 2.96
TMEM42-201ENST00000302392 FANCD2Q9BXW9 1451 aa33.5■■■□□ 2.95
TMEM42-201ENST00000302392 OSCARQ8IYS5 282 aa33.45■■■□□ 2.95
TMEM42-201ENST00000302392 CFTRP13569 1480 aa33.32■■■□□ 2.92
TMEM42-201ENST00000302392 URB2Q14146 1524 aaKnown RBP33.28■■■□□ 2.92
TMEM42-201ENST00000302392 RIMBP3CA6NJZ7 1639 aa33.26■■■□□ 2.91
TMEM42-201ENST00000302392 RIMBP3BA6NNM3 1639 aa33.26■■■□□ 2.91
TMEM42-201ENST00000302392 RIMBP3Q9UFD9 1639 aa33.26■■■□□ 2.91
TMEM42-201ENST00000302392 TOP2AP11388 1531 aaKnown RBP33.08■■■□□ 2.89
TMEM42-201ENST00000302392 PRDM2Q13029 1718 aa33.08■■■□□ 2.89
TMEM42-201ENST00000302392 ARHGEF11O15085 1522 aa33.06■■■□□ 2.88
TMEM42-201ENST00000302392 ZNF608Q9ULD9 1512 aaPredicted RBP32.97■■■□□ 2.87
TMEM42-201ENST00000302392 IFT140Q96RY7 1462 aa32.96■■■□□ 2.87
TMEM42-201ENST00000302392 RSF1Q96T23 1441 aaPredicted RBP32.94■■■□□ 2.86
TMEM42-201ENST00000302392 EIF4G3O43432 1585 aaKnown RBP32.84■■■□□ 2.85
TMEM42-201ENST00000302392 TOPBP1Q92547 1522 aa32.79■■■□□ 2.84
TMEM42-201ENST00000302392 CHD1O14646 1710 aa32.74■■■□□ 2.83
TMEM42-201ENST00000302392 CYB5RLQ6IPT4 315 aa32.72■■■□□ 2.83
TMEM42-201ENST00000302392 ARAP1Q96P48 1450 aa32.68■■■□□ 2.82
TMEM42-201ENST00000302392 ABCC8Q09428 1581 aa32.64■■■□□ 2.82
TMEM42-201ENST00000302392 DNMBPQ6XZF7 1577 aa32.64■■■□□ 2.82
TMEM42-201ENST00000302392 CCDC88BA6NC98 1476 aa32.63■■■□□ 2.81
TMEM42-201ENST00000302392 TRHP20396 242 aaPredicted RBP32.63■■■□□ 2.81
TMEM42-201ENST00000302392 TARBP1Q13395 1621 aaKnown RBP32.58■■■□□ 2.81
TMEM42-201ENST00000302392 AQRO60306 1485 aaKnown RBP eCLIP32.54■■■□□ 2.8
TMEM42-201ENST00000302392 FBLN2P98095 1184 aa32.44■■■□□ 2.78
TMEM42-201ENST00000302392 POLA1P09884 1462 aaPredicted RBP32.42■■■□□ 2.78
TMEM42-201ENST00000302392 CLASP1Q7Z460 1538 aa32.31■■■□□ 2.76
TMEM42-201ENST00000302392 SNAPC4Q5SXM2 1469 aa32.27■■■□□ 2.76
TMEM42-201ENST00000302392 RAD54L2Q9Y4B4 1467 aa32.27■■■□□ 2.76
TMEM42-201ENST00000302392 WDR97A6NE52 1622 aa32.24■■■□□ 2.75
TMEM42-201ENST00000302392 SYNJ1O43426 1573 aa32.24■■■□□ 2.75
TMEM42-201ENST00000302392 AEBP2Q6ZN18 517 aaPredicted RBP32.23■■■□□ 2.75
TMEM42-201ENST00000302392 TDRD9Q8NDG6 1382 aaKnown RBP32.21■■■□□ 2.75
TMEM42-201ENST00000302392 SOGA1O94964 1423 aa32.18■■■□□ 2.74
TMEM42-201ENST00000302392 MAGI1Q96QZ7 1491 aaPredicted RBP32.14■■■□□ 2.74
TMEM42-201ENST00000302392 FGD5Q6ZNL6 1462 aa32.1■■■□□ 2.73
TMEM42-201ENST00000302392 CHMP7Q8WUX9 453 aaPredicted RBP32.08■■■□□ 2.73
TMEM42-201ENST00000302392 GRIN2BQ13224 1484 aa32.04■■■□□ 2.72
TMEM42-201ENST00000302392 SYNJ2O15056 1496 aa32.03■■■□□ 2.72
TMEM42-201ENST00000302392 GAPVD1Q14C86 1478 aa31.97■■■□□ 2.71
TMEM42-201ENST00000302392 PBRM1Q86U86 1689 aa31.97■■■□□ 2.71
TMEM42-201ENST00000302392 CUX1P39880 1505 aa31.96■■■□□ 2.71
TMEM42-201ENST00000302392 ABCA5Q8WWZ7 1642 aa31.77■■■□□ 2.68
TMEM42-201ENST00000302392 ERCC6L2Q5T890 1561 aa31.73■■■□□ 2.67
TMEM42-201ENST00000302392 ABCA10Q8WWZ4 1543 aa31.7■■■□□ 2.66
TMEM42-201ENST00000302392 GRIN2AQ12879 1464 aa31.65■■■□□ 2.66
TMEM42-201ENST00000302392 CEP170Q5SW79 1584 aa31.63■■■□□ 2.65
TMEM42-201ENST00000302392 ADAMTS12P58397 1594 aa31.6■■■□□ 2.65
TMEM42-201ENST00000302392 KIF13AQ9H1H9 1805 aa31.56■■■□□ 2.64
TMEM42-201ENST00000302392 NUP160Q12769 1436 aa31.56■■■□□ 2.64
TMEM42-201ENST00000302392 SHROOM2Q13796 1616 aa31.55■■■□□ 2.64
TMEM42-201ENST00000302392 FHAD1B1AJZ9 1412 aa31.39■■■□□ 2.62
TMEM42-201ENST00000302392 WRNQ14191 1432 aaPredicted RBP eCLIP31.38■■■□□ 2.61
TMEM42-201ENST00000302392 BIVM-ERCC5R4GMW8 1640 aa31.31■■■□□ 2.6
TMEM42-201ENST00000302392 ERICH3Q5RHP9 1530 aa31.3■■■□□ 2.6
TMEM42-201ENST00000302392 PRG4Q92954 1404 aaPredicted RBP31.28■■■□□ 2.6
TMEM42-201ENST00000302392 TOP2BQ02880 1626 aa31.27■■■□□ 2.6
TMEM42-201ENST00000302392 ABCC10Q5T3U5 1492 aa31.23■■■□□ 2.59
TMEM42-201ENST00000302392 DIP2BQ9P265 1576 aa31.21■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms