RNA–Protein interactions for RNA: ENST00000431037.2

PMS2P1-201, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 1, humanhuman

BASIC

Gene PMS2P1, Length 1,228 nt, Biotype unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P1-201ENST00000431037 NISCHQ9Y2I1 1504 aa43.58■■■■■ 4.57
PMS2P1-201ENST00000431037 ABCC9O60706 1549 aa39.45■■■■□ 3.91
PMS2P1-201ENST00000431037 CCDC180Q9P1Z9 1646 aa39.35■■■■□ 3.89
PMS2P1-201ENST00000431037 RB1CC1Q8TDY2 1594 aa37.55■■■■□ 3.6
PMS2P1-201ENST00000431037 NACADO15069 1562 aa37.22■■■■□ 3.55
PMS2P1-201ENST00000431037 DNAJC5BQ9UF47 199 aa37.14■■■■□ 3.54
PMS2P1-201ENST00000431037 DCAF8L2P0C7V8 631 aa36.73■■■■□ 3.47
PMS2P1-201ENST00000431037 MYO15BQ96JP2 1530 aa36.67■■■■□ 3.46
PMS2P1-201ENST00000431037 UNC13AQ9UPW8 1703 aa36.65■■■■□ 3.46
PMS2P1-201ENST00000431037 PABPN1Q86U42 306 aaKnown RBP eCLIP36.59■■■■□ 3.45
PMS2P1-201ENST00000431037 BICRAQ9NZM4 1560 aa36.4■■■■□ 3.42
PMS2P1-201ENST00000431037 ZCCHC6Q5VYS8 1495 aaKnown RBP36.08■■■■□ 3.37
PMS2P1-201ENST00000431037 DCAF1Q9Y4B6 1507 aa36.07■■■■□ 3.36
PMS2P1-201ENST00000431037 SHROOM4Q9ULL8 1493 aa36.05■■■■□ 3.36
PMS2P1-201ENST00000431037 SCRIBQ14160 1630 aa35.71■■■■□ 3.31
PMS2P1-201ENST00000431037 CC2D2AQ9P2K1 1620 aa35.67■■■■□ 3.3
PMS2P1-201ENST00000431037 CECR2Q9BXF3 1484 aa35.61■■■■□ 3.29
PMS2P1-201ENST00000431037 EIF4G1Q04637 1599 aaKnown RBP35.55■■■■□ 3.28
PMS2P1-201ENST00000431037 DNAJC5Q9H3Z4 198 aa34.41■■■■□ 3.1
PMS2P1-201ENST00000431037 NCAPD3P42695 1498 aa34.33■■■■□ 3.09
PMS2P1-201ENST00000431037 CUX2O14529 1486 aa34.23■■■■□ 3.07
PMS2P1-201ENST00000431037 ERCC6Q03468 1493 aa34.14■■■■□ 3.06
PMS2P1-201ENST00000431037 ATAD2BQ9ULI0 1458 aa34.14■■■■□ 3.06
PMS2P1-201ENST00000431037 SMARCA2P51531 1590 aa34.12■■■■□ 3.05
PMS2P1-201ENST00000431037 HMGXB3Q12766 1538 aa34.1■■■■□ 3.05
PMS2P1-201ENST00000431037 SMARCA4P51532 1647 aa34.08■■■■□ 3.05
PMS2P1-201ENST00000431037 BAZ1AQ9NRL2 1556 aaPredicted RBP33.9■■■■□ 3.02
PMS2P1-201ENST00000431037 BAZ1BQ9UIG0 1483 aaKnown RBP33.83■■■■□ 3.01
PMS2P1-201ENST00000431037 PEG3Q9GZU2 1588 aa33.81■■■■□ 3
PMS2P1-201ENST00000431037 NESP48681 1621 aa33.79■■■■□ 3
PMS2P1-201ENST00000431037 LAMC3Q9Y6N6 1575 aa33.64■■■□□ 2.98
PMS2P1-201ENST00000431037 THOC2Q8NI27 1593 aaKnown RBP33.61■■■□□ 2.97
PMS2P1-201ENST00000431037 MROH2BQ7Z745 1585 aa33.53■■■□□ 2.96
PMS2P1-201ENST00000431037 PDS5BQ9NTI5 1447 aa33.43■■■□□ 2.94
PMS2P1-201ENST00000431037 KIF21AQ7Z4S6 1674 aa33.42■■■□□ 2.94
PMS2P1-201ENST00000431037 CADPSQ9ULU8 1353 aa33.23■■■□□ 2.91
PMS2P1-201ENST00000431037 MRC2Q9UBG0 1479 aa33.15■■■□□ 2.9
PMS2P1-201ENST00000431037 WIZO95785 1651 aa33.12■■■□□ 2.89
PMS2P1-201ENST00000431037 WDR62O43379 1518 aa33.1■■■□□ 2.89
PMS2P1-201ENST00000431037 CEP164Q9UPV0 1460 aa32.97■■■□□ 2.87
PMS2P1-201ENST00000431037 FANCD2Q9BXW9 1451 aa32.87■■■□□ 2.85
PMS2P1-201ENST00000431037 CFTRP13569 1480 aa32.83■■■□□ 2.85
PMS2P1-201ENST00000431037 TOP2AP11388 1531 aaKnown RBP32.76■■■□□ 2.83
PMS2P1-201ENST00000431037 RSF1Q96T23 1441 aaPredicted RBP32.73■■■□□ 2.83
PMS2P1-201ENST00000431037 TRIM41Q8WV44 630 aa32.72■■■□□ 2.83
PMS2P1-201ENST00000431037 URB2Q14146 1524 aaKnown RBP32.6■■■□□ 2.81
PMS2P1-201ENST00000431037 PRDM2Q13029 1718 aa32.56■■■□□ 2.8
PMS2P1-201ENST00000431037 OSCARQ8IYS5 282 aa32.51■■■□□ 2.79
PMS2P1-201ENST00000431037 IFT140Q96RY7 1462 aa32.31■■■□□ 2.76
PMS2P1-201ENST00000431037 CCDC88BA6NC98 1476 aa32.3■■■□□ 2.76
PMS2P1-201ENST00000431037 TOPBP1Q92547 1522 aa32.21■■■□□ 2.75
PMS2P1-201ENST00000431037 ZNF608Q9ULD9 1512 aaPredicted RBP32.21■■■□□ 2.75
PMS2P1-201ENST00000431037 ABCC8Q09428 1581 aa32.19■■■□□ 2.74
PMS2P1-201ENST00000431037 RIMBP3CA6NJZ7 1639 aa32.17■■■□□ 2.74
PMS2P1-201ENST00000431037 RIMBP3BA6NNM3 1639 aa32.17■■■□□ 2.74
PMS2P1-201ENST00000431037 RIMBP3Q9UFD9 1639 aa32.17■■■□□ 2.74
PMS2P1-201ENST00000431037 EIF4G3O43432 1585 aaKnown RBP32.11■■■□□ 2.73
PMS2P1-201ENST00000431037 DNMBPQ6XZF7 1577 aa32.11■■■□□ 2.73
PMS2P1-201ENST00000431037 ARHGEF11O15085 1522 aa32.05■■■□□ 2.72
PMS2P1-201ENST00000431037 TARBP1Q13395 1621 aaKnown RBP31.97■■■□□ 2.71
PMS2P1-201ENST00000431037 CHD1O14646 1710 aa31.9■■■□□ 2.7
PMS2P1-201ENST00000431037 AQRO60306 1485 aaKnown RBP eCLIP31.87■■■□□ 2.697e-7■■■■□ 21
PMS2P1-201ENST00000431037 POLA1P09884 1462 aaPredicted RBP31.87■■■□□ 2.69
PMS2P1-201ENST00000431037 WDR97A6NE52 1622 aa31.75■■■□□ 2.67
PMS2P1-201ENST00000431037 CYB5RLQ6IPT4 315 aa31.72■■■□□ 2.67
PMS2P1-201ENST00000431037 SOGA1O94964 1423 aa31.69■■■□□ 2.66
PMS2P1-201ENST00000431037 FBLN2P98095 1184 aa31.69■■■□□ 2.66
PMS2P1-201ENST00000431037 ARAP1Q96P48 1450 aa31.69■■■□□ 2.66
PMS2P1-201ENST00000431037 RAD54L2Q9Y4B4 1467 aa31.69■■■□□ 2.66
PMS2P1-201ENST00000431037 FGD5Q6ZNL6 1462 aa31.62■■■□□ 2.65
PMS2P1-201ENST00000431037 TDRD9Q8NDG6 1382 aaKnown RBP31.62■■■□□ 2.65
PMS2P1-201ENST00000431037 SNAPC4Q5SXM2 1469 aa31.59■■■□□ 2.65
PMS2P1-201ENST00000431037 MAGI1Q96QZ7 1491 aaPredicted RBP31.57■■■□□ 2.64
PMS2P1-201ENST00000431037 CLASP1Q7Z460 1538 aa31.54■■■□□ 2.64
PMS2P1-201ENST00000431037 CUX1P39880 1505 aa31.54■■■□□ 2.64
PMS2P1-201ENST00000431037 SYNJ1O43426 1573 aa31.53■■■□□ 2.64
PMS2P1-201ENST00000431037 GRIN2BQ13224 1484 aa31.5■■■□□ 2.63
PMS2P1-201ENST00000431037 TRHP20396 242 aaPredicted RBP31.47■■■□□ 2.63
PMS2P1-201ENST00000431037 CHMP7Q8WUX9 453 aaPredicted RBP31.45■■■□□ 2.63
PMS2P1-201ENST00000431037 SYNJ2O15056 1496 aa31.44■■■□□ 2.62
PMS2P1-201ENST00000431037 PBRM1Q86U86 1689 aa31.38■■■□□ 2.61
PMS2P1-201ENST00000431037 GAPVD1Q14C86 1478 aa31.33■■■□□ 2.61
PMS2P1-201ENST00000431037 ABCA10Q8WWZ4 1543 aa31.29■■■□□ 2.6
PMS2P1-201ENST00000431037 ABCA5Q8WWZ7 1642 aa31.28■■■□□ 2.6
PMS2P1-201ENST00000431037 WRNQ14191 1432 aaPredicted RBP eCLIP31.1■■■□□ 2.57
PMS2P1-201ENST00000431037 GRIN2AQ12879 1464 aa31.09■■■□□ 2.57
PMS2P1-201ENST00000431037 ADAMTS12P58397 1594 aa31.06■■■□□ 2.56
PMS2P1-201ENST00000431037 BIVM-ERCC5R4GMW8 1640 aa31.02■■■□□ 2.56
PMS2P1-201ENST00000431037 TOP2BQ02880 1626 aa31.02■■■□□ 2.56
PMS2P1-201ENST00000431037 NUP160Q12769 1436 aa30.99■■■□□ 2.55
PMS2P1-201ENST00000431037 CEP170Q5SW79 1584 aa30.98■■■□□ 2.55
PMS2P1-201ENST00000431037 SUPT5HO00267 1087 aaKnown RBP30.96■■■□□ 2.55
PMS2P1-201ENST00000431037 ERCC6L2Q5T890 1561 aa30.95■■■□□ 2.54
PMS2P1-201ENST00000431037 FHAD1B1AJZ9 1412 aa30.93■■■□□ 2.54
PMS2P1-201ENST00000431037 SHROOM2Q13796 1616 aa30.93■■■□□ 2.54
PMS2P1-201ENST00000431037 ERICH3Q5RHP9 1530 aa30.91■■■□□ 2.54
PMS2P1-201ENST00000431037 AEBP2Q6ZN18 517 aaPredicted RBP30.79■■■□□ 2.52
PMS2P1-201ENST00000431037 PRG4Q92954 1404 aaPredicted RBP30.68■■■□□ 2.5
PMS2P1-201ENST00000431037 RUSC2Q8N2Y8 1516 aa30.65■■■□□ 2.5
PMS2P1-201ENST00000431037 KIF13AQ9H1H9 1805 aa30.63■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms