Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC13.05□□□□□ -0.32
IFNA1P01562 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC13.05□□□□□ -0.32
IFNA1P01562 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC13.05□□□□□ -0.32
IFNA1P01562 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC13.05□□□□□ -0.32
IFNA1P01562 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
IFNA1P01562 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
IFNA1P01562 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
IFNA1P01562 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
IFNA1P01562 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
IFNA1P01562 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
IFNA1P01562 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
IFNA1P01562 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
IFNA1P01562 AC006277.1-201ENST00000624348 1610 ntBASIC13.05□□□□□ -0.32
IFNA1P01562 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
IFNA1P01562 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
IFNA1P01562 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
IFNA1P01562 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC13.05□□□□□ -0.32
IFNA1P01562 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
IFNA1P01562 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
IFNA1P01562 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
IFNA1P01562 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
IFNA1P01562 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
IFNA1P01562 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.05□□□□□ -0.32
IFNA1P01562 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
IFNA1P01562 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
IFNA1P01562 AC069224.1-201ENST00000566372 1715 ntBASIC13.05□□□□□ -0.32
IFNA1P01562 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
IFNA1P01562 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
IFNA1P01562 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
IFNA1P01562 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
IFNA1P01562 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
IFNA1P01562 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
IFNA1P01562 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
IFNA1P01562 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
IFNA1P01562 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
IFNA1P01562 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
IFNA1P01562 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
IFNA1P01562 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
IFNA1P01562 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
IFNA1P01562 AC009336.1-201ENST00000608941 1553 ntBASIC13.04□□□□□ -0.32
IFNA1P01562 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.04□□□□□ -0.32
IFNA1P01562 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
IFNA1P01562 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
IFNA1P01562 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.04□□□□□ -0.32
IFNA1P01562 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
IFNA1P01562 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
IFNA1P01562 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
IFNA1P01562 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
IFNA1P01562 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC13.04□□□□□ -0.32
IFNA1P01562 AP003733.1-201ENST00000491725 852 ntBASIC13.04□□□□□ -0.32
IFNA1P01562 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC13.04□□□□□ -0.32
IFNA1P01562 AC122714.2-201ENST00000502787 707 ntBASIC13.04□□□□□ -0.32
IFNA1P01562 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC13.04□□□□□ -0.32
IFNA1P01562 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
IFNA1P01562 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC13.04□□□□□ -0.32
IFNA1P01562 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
IFNA1P01562 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
IFNA1P01562 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.04□□□□□ -0.32
IFNA1P01562 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.04□□□□□ -0.32
IFNA1P01562 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
IFNA1P01562 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.04□□□□□ -0.32
IFNA1P01562 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC13.04□□□□□ -0.32
IFNA1P01562 AC016027.1-202ENST00000607927 1699 ntBASIC13.04□□□□□ -0.32
IFNA1P01562 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
IFNA1P01562 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
IFNA1P01562 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.04□□□□□ -0.32
IFNA1P01562 AL031595.1-201ENST00000623969 4709 ntBASIC13.04□□□□□ -0.32
IFNA1P01562 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
IFNA1P01562 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC13.04□□□□□ -0.32
IFNA1P01562 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
IFNA1P01562 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
IFNA1P01562 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC13.04□□□□□ -0.32
IFNA1P01562 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
IFNA1P01562 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
IFNA1P01562 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
IFNA1P01562 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
IFNA1P01562 KRT8P49-201ENST00000604166 1432 ntBASIC13.04□□□□□ -0.32
IFNA1P01562 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.04□□□□□ -0.32
IFNA1P01562 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
IFNA1P01562 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
IFNA1P01562 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
IFNA1P01562 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.03□□□□□ -0.32
IFNA1P01562 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
IFNA1P01562 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
IFNA1P01562 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.03□□□□□ -0.32
IFNA1P01562 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
IFNA1P01562 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
IFNA1P01562 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
IFNA1P01562 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
IFNA1P01562 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
IFNA1P01562 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
IFNA1P01562 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.03□□□□□ -0.32
IFNA1P01562 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.03□□□□□ -0.32
IFNA1P01562 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
IFNA1P01562 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC13.03□□□□□ -0.32
IFNA1P01562 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
IFNA1P01562 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
IFNA1P01562 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
IFNA1P01562 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
IFNA1P01562 AC026748.1-201ENST00000624349 3251 ntBASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms