RNA–Protein interactions for RNA: ENST00000622834.4

ITGBL1-207, Transcript of integrin subunit beta like 1, humanhuman

TSL 5 BASIC

Gene ITGBL1, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGBL1-207ENST00000622834 NISCHQ9Y2I1 1504 aa32.98■■■□□ 2.87
ITGBL1-207ENST00000622834 CCDC180Q9P1Z9 1646 aa28.53■■■□□ 2.16
ITGBL1-207ENST00000622834 ZCCHC6Q5VYS8 1495 aaKnown RBP27.71■■■□□ 2.03
ITGBL1-207ENST00000622834 DCAF8L2P0C7V8 631 aa27.59■■■□□ 2.01
ITGBL1-207ENST00000622834 SHROOM4Q9ULL8 1493 aa27.46■■□□□ 1.99
ITGBL1-207ENST00000622834 ABCC9O60706 1549 aa27.18■■□□□ 1.94
ITGBL1-207ENST00000622834 DCAF1Q9Y4B6 1507 aa27.05■■□□□ 1.92
ITGBL1-207ENST00000622834 MYO15BQ96JP2 1530 aa26.59■■□□□ 1.85
ITGBL1-207ENST00000622834 SCRIBQ14160 1630 aa26.59■■□□□ 1.85
ITGBL1-207ENST00000622834 NACADO15069 1562 aa26.54■■□□□ 1.84
ITGBL1-207ENST00000622834 SUPT5HO00267 1087 aaKnown RBP26.47■■□□□ 1.83
ITGBL1-207ENST00000622834 RB1CC1Q8TDY2 1594 aa26.34■■□□□ 1.81
ITGBL1-207ENST00000622834 UNC13AQ9UPW8 1703 aa26.03■■□□□ 1.76
ITGBL1-207ENST00000622834 CECR2Q9BXF3 1484 aa25.8■■□□□ 1.72
ITGBL1-207ENST00000622834 PABPN1Q86U42 306 aaKnown RBP eCLIP25.77■■□□□ 1.72
ITGBL1-207ENST00000622834 RSF1Q96T23 1441 aaPredicted RBP25.72■■□□□ 1.71
ITGBL1-207ENST00000622834 BICRAQ9NZM4 1560 aa25.65■■□□□ 1.7
ITGBL1-207ENST00000622834 MROH2BQ7Z745 1585 aa25.61■■□□□ 1.69
ITGBL1-207ENST00000622834 PELP1Q8IZL8 1130 aaKnown RBP25.6■■□□□ 1.69
ITGBL1-207ENST00000622834 WIZO95785 1651 aa25.47■■□□□ 1.67
ITGBL1-207ENST00000622834 HRCP23327 699 aa25.45■■□□□ 1.66
ITGBL1-207ENST00000622834 BAZ1AQ9NRL2 1556 aaPredicted RBP25.41■■□□□ 1.66
ITGBL1-207ENST00000622834 SMARCA4P51532 1647 aa25.34■■□□□ 1.65
ITGBL1-207ENST00000622834 CHIC1Q5VXU3 224 aa25.26■■□□□ 1.63
ITGBL1-207ENST00000622834 TOP2AP11388 1531 aaKnown RBP25.01■■□□□ 1.59
ITGBL1-207ENST00000622834 MYT1Q01538 1121 aa24.88■■□□□ 1.57
ITGBL1-207ENST00000622834 ATAD2BQ9ULI0 1458 aa24.87■■□□□ 1.57
ITGBL1-207ENST00000622834 PEG3Q9GZU2 1588 aa24.87■■□□□ 1.57
ITGBL1-207ENST00000622834 CCDC88BA6NC98 1476 aa24.87■■□□□ 1.57
ITGBL1-207ENST00000622834 SMARCA2P51531 1590 aa24.86■■□□□ 1.57
ITGBL1-207ENST00000622834 EIF4G1Q04637 1599 aaKnown RBP24.85■■□□□ 1.57
ITGBL1-207ENST00000622834 BAZ1BQ9UIG0 1483 aaKnown RBP24.77■■□□□ 1.56
ITGBL1-207ENST00000622834 TRIM41Q8WV44 630 aa24.7■■□□□ 1.54
ITGBL1-207ENST00000622834 PPARGC1BQ86YN6 1023 aaKnown RBP24.59■■□□□ 1.53
ITGBL1-207ENST00000622834 ABCC8Q09428 1581 aa24.56■■□□□ 1.52
ITGBL1-207ENST00000622834 NCAPD3P42695 1498 aa24.53■■□□□ 1.52
ITGBL1-207ENST00000622834 LOC105371045A0A1W2PR82 267 aa24.51■■□□□ 1.51
ITGBL1-207ENST00000622834 FAM9AQ8IZU1 332 aaPredicted RBP24.5■■□□□ 1.51
ITGBL1-207ENST00000622834 CC2D2AQ9P2K1 1620 aa24.49■■□□□ 1.51
ITGBL1-207ENST00000622834 HMGXB3Q12766 1538 aa24.49■■□□□ 1.51
ITGBL1-207ENST00000622834 PCGF6Q9BYE7 350 aa24.44■■□□□ 1.5
ITGBL1-207ENST00000622834 EHMT2Q96KQ7 1210 aa24.35■■□□□ 1.49
ITGBL1-207ENST00000622834 SCAF1Q9H7N4 1312 aaKnown RBP24.25■■□□□ 1.47
ITGBL1-207ENST00000622834 WRNQ14191 1432 aaPredicted RBP eCLIP24.19■■□□□ 1.46
ITGBL1-207ENST00000622834 SYNJ1O43426 1573 aa24.17■■□□□ 1.46
ITGBL1-207ENST00000622834 DNAJC5BQ9UF47 199 aa24.12■■□□□ 1.45
ITGBL1-207ENST00000622834 SOGA1O94964 1423 aa24.1■■□□□ 1.45
ITGBL1-207ENST00000622834 CFTRP13569 1480 aa24.08■■□□□ 1.45
ITGBL1-207ENST00000622834 RUSC2Q8N2Y8 1516 aa24.05■■□□□ 1.44
ITGBL1-207ENST00000622834 CADPSQ9ULU8 1353 aa23.99■■□□□ 1.43
ITGBL1-207ENST00000622834 PRDM2Q13029 1718 aa23.97■■□□□ 1.43
ITGBL1-207ENST00000622834 NESP48681 1621 aa23.95■■□□□ 1.42
ITGBL1-207ENST00000622834 TOP2BQ02880 1626 aa23.93■■□□□ 1.42
ITGBL1-207ENST00000622834 CUX1P39880 1505 aa23.91■■□□□ 1.42
ITGBL1-207ENST00000622834 ZEB1P37275 1124 aaPredicted RBP23.9■■□□□ 1.42
ITGBL1-207ENST00000622834 BIVM-ERCC5R4GMW8 1640 aa23.88■■□□□ 1.41
ITGBL1-207ENST00000622834 CSRNP3Q8WYN3 585 aa23.83■■□□□ 1.41
ITGBL1-207ENST00000622834 FANCD2Q9BXW9 1451 aa23.78■■□□□ 1.4
ITGBL1-207ENST00000622834 EEA1Q15075 1411 aa23.75■■□□□ 1.39
ITGBL1-207ENST00000622834 TRIM26Q12899 539 aaPredicted RBP23.75■■□□□ 1.39
ITGBL1-207ENST00000622834 LAMC3Q9Y6N6 1575 aa23.68■■□□□ 1.38
ITGBL1-207ENST00000622834 UBTFP17480 764 aaKnown RBP23.67■■□□□ 1.38
ITGBL1-207ENST00000622834 FGD5Q6ZNL6 1462 aa23.62■■□□□ 1.37
ITGBL1-207ENST00000622834 ACIN1Q9UKV3 1341 aaKnown RBP23.6■■□□□ 1.37
ITGBL1-207ENST00000622834 KIF21AQ7Z4S6 1674 aa23.59■■□□□ 1.37
ITGBL1-207ENST00000622834 GOLGA3Q08378 1498 aa23.59■■□□□ 1.37
ITGBL1-207ENST00000622834 CEP164Q9UPV0 1460 aa23.58■■□□□ 1.37
ITGBL1-207ENST00000622834 TTBK1Q5TCY1 1321 aaPredicted RBP23.56■■□□□ 1.36
ITGBL1-207ENST00000622834 RAPGEF2Q9Y4G8 1499 aa23.56■■□□□ 1.36
ITGBL1-207ENST00000622834 KIF21BO75037 1637 aa23.54■■□□□ 1.36
ITGBL1-207ENST00000622834 TOPBP1Q92547 1522 aa23.54■■□□□ 1.36
ITGBL1-207ENST00000622834 CEP162Q5TB80 1403 aa23.53■■□□□ 1.36
ITGBL1-207ENST00000622834 DNMBPQ6XZF7 1577 aa23.53■■□□□ 1.36
ITGBL1-207ENST00000622834 TNIKQ9UKE5 1360 aa23.53■■□□□ 1.36
ITGBL1-207ENST00000622834 CUX2O14529 1486 aa23.52■■□□□ 1.36
ITGBL1-207ENST00000622834 KIF27Q86VH2 1401 aa23.52■■□□□ 1.36
ITGBL1-207ENST00000622834 URB2Q14146 1524 aaKnown RBP23.51■■□□□ 1.35
ITGBL1-207ENST00000622834 PDS5BQ9NTI5 1447 aa23.51■■□□□ 1.35
ITGBL1-207ENST00000622834 RANGAP1P46060 587 aaPredicted RBP23.5■■□□□ 1.35
ITGBL1-207ENST00000622834 RAD54L2Q9Y4B4 1467 aa23.5■■□□□ 1.35
ITGBL1-207ENST00000622834 POLA1P09884 1462 aaPredicted RBP23.46■■□□□ 1.35
ITGBL1-207ENST00000622834 PRXQ9BXM0 1461 aa23.4■■□□□ 1.34
ITGBL1-207ENST00000622834 NEUROD1Q13562 356 aa23.37■■□□□ 1.33
ITGBL1-207ENST00000622834 IGF1RP08069 1367 aa23.35■■□□□ 1.33
ITGBL1-207ENST00000622834 GTF3C3Q9Y5Q9 886 aa23.32■■□□□ 1.32
ITGBL1-207ENST00000622834 ERICH3Q5RHP9 1530 aa23.31■■□□□ 1.32
ITGBL1-207ENST00000622834 ABCA10Q8WWZ4 1543 aa23.3■■□□□ 1.32
ITGBL1-207ENST00000622834 CENPBP07199 599 aaPredicted RBP23.3■■□□□ 1.32
ITGBL1-207ENST00000622834 CLIP1P30622 1438 aa23.29■■□□□ 1.32
ITGBL1-207ENST00000622834 TDRD9Q8NDG6 1382 aaKnown RBP23.26■■□□□ 1.31
ITGBL1-207ENST00000622834 WDR97A6NE52 1622 aa23.24■■□□□ 1.31
ITGBL1-207ENST00000622834 CARMIL1Q5VZK9 1371 aa23.24■■□□□ 1.31
ITGBL1-207ENST00000622834 MRC2Q9UBG0 1479 aa23.22■■□□□ 1.31
ITGBL1-207ENST00000622834 ERCC6Q03468 1493 aa23.2■■□□□ 1.3
ITGBL1-207ENST00000622834 TARBP1Q13395 1621 aaKnown RBP23.16■■□□□ 1.3
ITGBL1-207ENST00000622834 ABCA5Q8WWZ7 1642 aa23.13■■□□□ 1.29
ITGBL1-207ENST00000622834 GAPVD1Q14C86 1478 aa23.11■■□□□ 1.29
ITGBL1-207ENST00000622834 AQRO60306 1485 aaKnown RBP eCLIP23.07■■□□□ 1.28
ITGBL1-207ENST00000622834 WDR62O43379 1518 aa23.07■■□□□ 1.28
ITGBL1-207ENST00000622834 VPS8Q8N3P4 1428 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms