Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHRNA3P32297 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHRNA3P32297 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.39■□□□□ 0.37
CHRNA3P32297 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.39■□□□□ 0.37
CHRNA3P32297 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHRNA3P32297 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHRNA3P32297 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHRNA3P32297 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CHRNA3P32297 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.39■□□□□ 0.37
CHRNA3P32297 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHRNA3P32297 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
CHRNA3P32297 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.38■□□□□ 0.37
CHRNA3P32297 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHRNA3P32297 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.38■□□□□ 0.37
CHRNA3P32297 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHRNA3P32297 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHRNA3P32297 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.38■□□□□ 0.37
CHRNA3P32297 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHRNA3P32297 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHRNA3P32297 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CHRNA3P32297 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHRNA3P32297 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CHRNA3P32297 BX842568.4-201ENST00000421222 227 ntBASIC17.38■□□□□ 0.37
CHRNA3P32297 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.38■□□□□ 0.37
CHRNA3P32297 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHRNA3P32297 KRT18P2-201ENST00000447938 1258 ntBASIC17.38■□□□□ 0.37
CHRNA3P32297 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.38■□□□□ 0.37
CHRNA3P32297 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.38■□□□□ 0.37
CHRNA3P32297 AC040169.1-201ENST00000565382 521 ntBASIC17.38■□□□□ 0.37
CHRNA3P32297 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CHRNA3P32297 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.38■□□□□ 0.37
CHRNA3P32297 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.38■□□□□ 0.37
CHRNA3P32297 AC010654.1-201ENST00000615722 808 ntBASIC17.38■□□□□ 0.37
CHRNA3P32297 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.38■□□□□ 0.37
CHRNA3P32297 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.38■□□□□ 0.37
CHRNA3P32297 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHRNA3P32297 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHRNA3P32297 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHRNA3P32297 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHRNA3P32297 AL031731.1-201ENST00000642131 2094 ntBASIC17.38■□□□□ 0.37
CHRNA3P32297 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.38■□□□□ 0.37
CHRNA3P32297 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNA3P32297 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNA3P32297 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.37■□□□□ 0.37
CHRNA3P32297 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNA3P32297 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.37■□□□□ 0.37
CHRNA3P32297 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CHRNA3P32297 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNA3P32297 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.37■□□□□ 0.37
CHRNA3P32297 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNA3P32297 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNA3P32297 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNA3P32297 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
CHRNA3P32297 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNA3P32297 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
CHRNA3P32297 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNA3P32297 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNA3P32297 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNA3P32297 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.37■□□□□ 0.37
CHRNA3P32297 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
CHRNA3P32297 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNA3P32297 HCG4B-203ENST00000450128 991 ntBASIC17.37■□□□□ 0.37
CHRNA3P32297 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.37■□□□□ 0.37
CHRNA3P32297 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.37■□□□□ 0.37
CHRNA3P32297 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNA3P32297 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNA3P32297 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNA3P32297 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNA3P32297 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNA3P32297 KRT8P39-201ENST00000396270 1433 ntBASIC17.37■□□□□ 0.37
CHRNA3P32297 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNA3P32297 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNA3P32297 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNA3P32297 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNA3P32297 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA3P32297 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA3P32297 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA3P32297 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA3P32297 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.36■□□□□ 0.37
CHRNA3P32297 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA3P32297 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA3P32297 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA3P32297 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CHRNA3P32297 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.36■□□□□ 0.37
CHRNA3P32297 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CHRNA3P32297 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CHRNA3P32297 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.36■□□□□ 0.37
CHRNA3P32297 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.36■□□□□ 0.37
CHRNA3P32297 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.36■□□□□ 0.37
CHRNA3P32297 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.36■□□□□ 0.37
CHRNA3P32297 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.36■□□□□ 0.37
CHRNA3P32297 AC006538.3-201ENST00000612495 578 ntBASIC17.36■□□□□ 0.37
CHRNA3P32297 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
CHRNA3P32297 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.36■□□□□ 0.37
CHRNA3P32297 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CHRNA3P32297 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA3P32297 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA3P32297 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA3P32297 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.36■□□□□ 0.37
CHRNA3P32297 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms