RNA–Protein interactions for RNA: ENST00000550433.5

KCNC2-209, Transcript of potassium voltage-gated channel subfamily C member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNC2, Length 2,931 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC2-209ENST00000550433 NISCHQ9Y2I1 1504 aa31.98■■■□□ 2.71
KCNC2-209ENST00000550433 SHROOM4Q9ULL8 1493 aa28.32■■■□□ 2.12
KCNC2-209ENST00000550433 SUPT5HO00267 1087 aaKnown RBP27.96■■■□□ 2.07
KCNC2-209ENST00000550433 DCAF8L2P0C7V8 631 aa27.31■■□□□ 1.96
KCNC2-209ENST00000550433 ZCCHC6Q5VYS8 1495 aaKnown RBP27.06■■□□□ 1.92
KCNC2-209ENST00000550433 CHIC1Q5VXU3 224 aa27.05■■□□□ 1.92
KCNC2-209ENST00000550433 MYO15BQ96JP2 1530 aa27.04■■□□□ 1.92
KCNC2-209ENST00000550433 PCGF6Q9BYE7 350 aa26.89■■□□□ 1.9
KCNC2-209ENST00000550433 HRCP23327 699 aa26.88■■□□□ 1.89
KCNC2-209ENST00000550433 PPARGC1BQ86YN6 1023 aaKnown RBP26.65■■□□□ 1.86
KCNC2-209ENST00000550433 CCDC180Q9P1Z9 1646 aa26.64■■□□□ 1.86
KCNC2-209ENST00000550433 LOC105371045A0A1W2PR82 267 aa26.56■■□□□ 1.84
KCNC2-209ENST00000550433 DCAF1Q9Y4B6 1507 aa26.06■■□□□ 1.76
KCNC2-209ENST00000550433 EHMT2Q96KQ7 1210 aa26.01■■□□□ 1.75
KCNC2-209ENST00000550433 TRIM26Q12899 539 aaPredicted RBP25.97■■□□□ 1.75
KCNC2-209ENST00000550433 FAM9AQ8IZU1 332 aaPredicted RBP25.95■■□□□ 1.74
KCNC2-209ENST00000550433 TRIM41Q8WV44 630 aa25.79■■□□□ 1.72
KCNC2-209ENST00000550433 PELP1Q8IZL8 1130 aaKnown RBP25.71■■□□□ 1.71
KCNC2-209ENST00000550433 SCRIBQ14160 1630 aa25.62■■□□□ 1.69
KCNC2-209ENST00000550433 RSF1Q96T23 1441 aaPredicted RBP25.61■■□□□ 1.69
KCNC2-209ENST00000550433 ABCC9O60706 1549 aa25.58■■□□□ 1.69
KCNC2-209ENST00000550433 RB1CC1Q8TDY2 1594 aa25.43■■□□□ 1.66
KCNC2-209ENST00000550433 ZEB1P37275 1124 aaPredicted RBP25.42■■□□□ 1.66
KCNC2-209ENST00000550433 TTBK1Q5TCY1 1321 aaPredicted RBP25.21■■□□□ 1.63
KCNC2-209ENST00000550433 CECR2Q9BXF3 1484 aa25.2■■□□□ 1.62
KCNC2-209ENST00000550433 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.17■■□□□ 1.62
KCNC2-209ENST00000550433 SCAF1Q9H7N4 1312 aaKnown RBP25.16■■□□□ 1.62
KCNC2-209ENST00000550433 CCER1Q8TC90 406 aaPredicted RBP25.05■■□□□ 1.6
KCNC2-209ENST00000550433 MROH2BQ7Z745 1585 aa25.05■■□□□ 1.6
KCNC2-209ENST00000550433 WIZO95785 1651 aa24.93■■□□□ 1.58
KCNC2-209ENST00000550433 NEUROD1Q13562 356 aa24.75■■□□□ 1.55
KCNC2-209ENST00000550433 MYT1Q01538 1121 aa24.72■■□□□ 1.55
KCNC2-209ENST00000550433 NACADO15069 1562 aa24.7■■□□□ 1.55
KCNC2-209ENST00000550433 DIEXFQ68CQ4 756 aaKnown RBP24.69■■□□□ 1.54
KCNC2-209ENST00000550433 ACIN1Q9UKV3 1341 aaKnown RBP24.68■■□□□ 1.54
KCNC2-209ENST00000550433 ABCC8Q09428 1581 aa24.66■■□□□ 1.54
KCNC2-209ENST00000550433 CCDC88BA6NC98 1476 aa24.62■■□□□ 1.53
KCNC2-209ENST00000550433 UBTFP17480 764 aaKnown RBP24.62■■□□□ 1.53
KCNC2-209ENST00000550433 GTF3C3Q9Y5Q9 886 aa24.57■■□□□ 1.52
KCNC2-209ENST00000550433 BAZ1AQ9NRL2 1556 aaPredicted RBP24.56■■□□□ 1.52
KCNC2-209ENST00000550433 SOGA1O94964 1423 aa24.55■■□□□ 1.52
KCNC2-209ENST00000550433 CEP162Q5TB80 1403 aa24.53■■□□□ 1.52
KCNC2-209ENST00000550433 YTHDC1Q96MU7 727 aaKnown RBP24.47■■□□□ 1.51
KCNC2-209ENST00000550433 CENPBP07199 599 aaPredicted RBP24.46■■□□□ 1.51
KCNC2-209ENST00000550433 EIF4G1Q04637 1599 aaKnown RBP24.45■■□□□ 1.5
KCNC2-209ENST00000550433 RUSC2Q8N2Y8 1516 aa24.43■■□□□ 1.5
KCNC2-209ENST00000550433 CSRNP3Q8WYN3 585 aa24.43■■□□□ 1.5
KCNC2-209ENST00000550433 HNRNPUL2Q1KMD3 747 aaKnown RBP24.41■■□□□ 1.5
KCNC2-209ENST00000550433 RANGAP1P46060 587 aaPredicted RBP24.4■■□□□ 1.5
KCNC2-209ENST00000550433 WRNQ14191 1432 aaPredicted RBP eCLIP24.34■■□□□ 1.49
KCNC2-209ENST00000550433 PABPN1Q86U42 306 aaKnown RBP eCLIP24.34■■□□□ 1.49
KCNC2-209ENST00000550433 TOP2AP11388 1531 aaKnown RBP24.33■■□□□ 1.49
KCNC2-209ENST00000550433 TNIKQ9UKE5 1360 aa24.33■■□□□ 1.49
KCNC2-209ENST00000550433 ZNF316A6NFI3 1004 aaPredicted RBP24.31■■□□□ 1.48
KCNC2-209ENST00000550433 SMARCA2P51531 1590 aa24.28■■□□□ 1.48
KCNC2-209ENST00000550433 SMARCA4P51532 1647 aa24.24■■□□□ 1.47
KCNC2-209ENST00000550433 MIER1Q8N108 512 aa24.17■■□□□ 1.46
KCNC2-209ENST00000550433 GOLGA3Q08378 1498 aa24.12■■□□□ 1.45
KCNC2-209ENST00000550433 APLP2Q06481 763 aa24.07■■□□□ 1.44
KCNC2-209ENST00000550433 EEA1Q15075 1411 aa24.07■■□□□ 1.44
KCNC2-209ENST00000550433 CLIP1P30622 1438 aa24■■□□□ 1.43
KCNC2-209ENST00000550433 UNC13AQ9UPW8 1703 aa23.93■■□□□ 1.42
KCNC2-209ENST00000550433 CEP164Q9UPV0 1460 aa23.91■■□□□ 1.42
KCNC2-209ENST00000550433 SYNJ1O43426 1573 aa23.89■■□□□ 1.41
KCNC2-209ENST00000550433 RAPGEF2Q9Y4G8 1499 aa23.85■■□□□ 1.41
KCNC2-209ENST00000550433 VPS8Q8N3P4 1428 aa23.83■■□□□ 1.41
KCNC2-209ENST00000550433 ITGAEP38570 1179 aa23.73■■□□□ 1.39
KCNC2-209ENST00000550433 KANK4Q5T7N3 995 aaPredicted RBP23.71■■□□□ 1.39
KCNC2-209ENST00000550433 KIF21BO75037 1637 aa23.71■■□□□ 1.39
KCNC2-209ENST00000550433 BICRAQ9NZM4 1560 aa23.69■■□□□ 1.38
KCNC2-209ENST00000550433 BAZ1BQ9UIG0 1483 aaKnown RBP23.65■■□□□ 1.38
KCNC2-209ENST00000550433 ATAD2BQ9ULI0 1458 aa23.63■■□□□ 1.37
KCNC2-209ENST00000550433 DHX57Q6P158 1386 aaKnown RBP23.6■■□□□ 1.37
KCNC2-209ENST00000550433 PEG3Q9GZU2 1588 aa23.51■■□□□ 1.35
KCNC2-209ENST00000550433 ARAP1Q96P48 1450 aa23.46■■□□□ 1.35
KCNC2-209ENST00000550433 SUPT16HQ9Y5B9 1047 aaKnown RBP23.46■■□□□ 1.35
KCNC2-209ENST00000550433 KCNH8Q96L42 1107 aa23.44■■□□□ 1.34
KCNC2-209ENST00000550433 BCL11AQ9H165 835 aa23.42■■□□□ 1.34
KCNC2-209ENST00000550433 TOP2BQ02880 1626 aa23.39■■□□□ 1.33
KCNC2-209ENST00000550433 CLSPNQ9HAW4 1339 aa23.38■■□□□ 1.33
KCNC2-209ENST00000550433 PRXQ9BXM0 1461 aa23.36■■□□□ 1.33
KCNC2-209ENST00000550433 BCANQ96GW7 911 aa23.33■■□□□ 1.33
KCNC2-209ENST00000550433 ATP1B4Q9UN42 357 aaPredicted RBP23.33■■□□□ 1.33
KCNC2-209ENST00000550433 CCNB3Q8WWL7 1395 aa23.32■■□□□ 1.32
KCNC2-209ENST00000550433 HIRIP3Q9BW71 556 aaPredicted RBP23.27■■□□□ 1.32
KCNC2-209ENST00000550433 P3H3Q8IVL6 736 aa23.27■■□□□ 1.32
KCNC2-209ENST00000550433 KIF27Q86VH2 1401 aa23.26■■□□□ 1.31
KCNC2-209ENST00000550433 FAM50AQ14320 339 aaKnown RBP23.26■■□□□ 1.31
KCNC2-209ENST00000550433 SIN3AQ96ST3 1273 aa23.26■■□□□ 1.31
KCNC2-209ENST00000550433 RRBP1Q9P2E9 1410 aaKnown RBP23.25■■□□□ 1.31
KCNC2-209ENST00000550433 ERICH3Q5RHP9 1530 aa23.24■■□□□ 1.31
KCNC2-209ENST00000550433 DDX10Q13206 875 aaKnown RBP23.24■■□□□ 1.31
KCNC2-209ENST00000550433 CUX1P39880 1505 aa23.24■■□□□ 1.31
KCNC2-209ENST00000550433 RAB3GAP2Q9H2M9 1393 aa23.23■■□□□ 1.31
KCNC2-209ENST00000550433 ARHGAP35Q9NRY4 1499 aa23.21■■□□□ 1.31
KCNC2-209ENST00000550433 BIVM-ERCC5R4GMW8 1640 aa23.2■■□□□ 1.3
KCNC2-209ENST00000550433 TSHZ2Q9NRE2 1034 aa23.18■■□□□ 1.3
KCNC2-209ENST00000550433 ANP32EQ9BTT0 268 aa23.14■■□□□ 1.29
KCNC2-209ENST00000550433 FKBP8Q14318 412 aa23.1■■□□□ 1.29
KCNC2-209ENST00000550433 CUX2O14529 1486 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms