Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.84■□□□□ 0.93
GMDSO60547 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GMDSO60547 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GMDSO60547 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
GMDSO60547 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
GMDSO60547 AC138932.3-201ENST00000567634 1902 ntBASIC20.84■□□□□ 0.93
GMDSO60547 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.83■□□□□ 0.93
GMDSO60547 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.83■□□□□ 0.93
GMDSO60547 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.83■□□□□ 0.93
GMDSO60547 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.83■□□□□ 0.93
GMDSO60547 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
GMDSO60547 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
GMDSO60547 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
GMDSO60547 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.83■□□□□ 0.92
GMDSO60547 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.82■□□□□ 0.92
GMDSO60547 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GMDSO60547 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
GMDSO60547 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
GMDSO60547 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GMDSO60547 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
GMDSO60547 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GMDSO60547 SMPD5-203ENST00000639008 1464 ntBASIC20.81■□□□□ 0.92
GMDSO60547 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.81■□□□□ 0.92
GMDSO60547 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GMDSO60547 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
GMDSO60547 AC025884.2-201ENST00000553429 711 ntBASIC20.81■□□□□ 0.92
GMDSO60547 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.81■□□□□ 0.92
GMDSO60547 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
GMDSO60547 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GMDSO60547 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
GMDSO60547 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
GMDSO60547 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
GMDSO60547 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GMDSO60547 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
GMDSO60547 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GMDSO60547 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
GMDSO60547 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.8■□□□□ 0.92
GMDSO60547 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.8■□□□□ 0.92
GMDSO60547 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GMDSO60547 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GMDSO60547 AC022211.4-201ENST00000625094 2161 ntBASIC20.8■□□□□ 0.92
GMDSO60547 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GMDSO60547 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.8■□□□□ 0.92
GMDSO60547 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.8■□□□□ 0.92
GMDSO60547 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
GMDSO60547 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
GMDSO60547 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
GMDSO60547 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
GMDSO60547 MIR3960-201ENST00000583311 91 ntBASIC20.79■□□□□ 0.92
GMDSO60547 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
GMDSO60547 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
GMDSO60547 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GMDSO60547 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
GMDSO60547 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.78■□□□□ 0.92
GMDSO60547 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.78■□□□□ 0.92
GMDSO60547 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.78■□□□□ 0.92
GMDSO60547 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.78■□□□□ 0.92
GMDSO60547 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
GMDSO60547 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GMDSO60547 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GMDSO60547 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
GMDSO60547 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GMDSO60547 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GMDSO60547 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GMDSO60547 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.77■□□□□ 0.92
GMDSO60547 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
GMDSO60547 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GMDSO60547 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
GMDSO60547 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
GMDSO60547 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.77■□□□□ 0.91
GMDSO60547 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
GMDSO60547 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GMDSO60547 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
GMDSO60547 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.76■□□□□ 0.91
GMDSO60547 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
GMDSO60547 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.76■□□□□ 0.91
GMDSO60547 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GMDSO60547 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
GMDSO60547 RNF126P1-201ENST00000567452 1320 ntBASIC20.76■□□□□ 0.91
GMDSO60547 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
GMDSO60547 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.76■□□□□ 0.91
GMDSO60547 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
GMDSO60547 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
GMDSO60547 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.75■□□□□ 0.91
GMDSO60547 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
GMDSO60547 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GMDSO60547 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.75■□□□□ 0.91
GMDSO60547 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GMDSO60547 AC096887.2-201ENST00000623443 1957 ntBASIC20.74■□□□□ 0.91
GMDSO60547 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.74■□□□□ 0.91
GMDSO60547 AC012676.1-201ENST00000574705 1949 ntBASIC20.74■□□□□ 0.91
GMDSO60547 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.74■□□□□ 0.91
GMDSO60547 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
GMDSO60547 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
GMDSO60547 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GMDSO60547 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GMDSO60547 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.73■□□□□ 0.91
GMDSO60547 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
GMDSO60547 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.73■□□□□ 0.91
GMDSO60547 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms