RNA–Protein interactions for RNA: ENST00000380038.7

KLC1-205, Transcript of kinesin light chain 1, human

TSL 2 BASIC

Gene KLC1, Length 2,322 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLC1-205	ENST00000380038	NISCH	Q9Y2I1	1504 aa		46.66	■■■■■ 5.06
KLC1-205	ENST00000380038	CCDC180	Q9P1Z9	1646 aa		39.84	■■■■□ 3.97
KLC1-205	ENST00000380038	SHROOM4	Q9ULL8	1493 aa		39.83	■■■■□ 3.97
KLC1-205	ENST00000380038	ZCCHC6	Q5VYS8	1495 aa	Known RBP	39.52	■■■■□ 3.92
KLC1-205	ENST00000380038	SUPT5H	O00267	1087 aa	Known RBP	39.17	■■■■□ 3.86
KLC1-205	ENST00000380038	DCAF8L2	P0C7V8	631 aa		38.52	■■■■□ 3.76
KLC1-205	ENST00000380038	DCAF1	Q9Y4B6	1507 aa		38.33	■■■■□ 3.73
KLC1-205	ENST00000380038	CHIC1	Q5VXU3	224 aa		38.26	■■■■□ 3.72
KLC1-205	ENST00000380038	MYO15B	Q96JP2	1530 aa		38.13	■■■■□ 3.69
KLC1-205	ENST00000380038	HRC	P23327	699 aa		37.4	■■■■□ 3.58
KLC1-205	ENST00000380038	ABCC9	O60706	1549 aa		37.39	■■■■□ 3.58
KLC1-205	ENST00000380038	PCGF6	Q9BYE7	350 aa		37.2	■■■■□ 3.55
KLC1-205	ENST00000380038	LOC105371045	A0A1W2PR82	267 aa		37.1	■■■■□ 3.53
KLC1-205	ENST00000380038	SCRIB	Q14160	1630 aa		37.06	■■■■□ 3.52
KLC1-205	ENST00000380038	RSF1	Q96T23	1441 aa	Predicted RBP	37.03	■■■■□ 3.52
KLC1-205	ENST00000380038	NACAD	O15069	1562 aa		37	■■■■□ 3.51
KLC1-205	ENST00000380038	RB1CC1	Q8TDY2	1594 aa		36.61	■■■■□ 3.45
KLC1-205	ENST00000380038	PPARGC1B	Q86YN6	1023 aa	Known RBP	36.54	■■■■□ 3.44
KLC1-205	ENST00000380038	TRIM26	Q12899	539 aa	Predicted RBP	36.51	■■■■□ 3.43
KLC1-205	ENST00000380038	TRIM41	Q8WV44	630 aa		36.51	■■■■□ 3.43
KLC1-205	ENST00000380038	CECR2	Q9BXF3	1484 aa		36.38	■■■■□ 3.41
KLC1-205	ENST00000380038	MROH2B	Q7Z745	1585 aa		36.28	■■■■□ 3.4
KLC1-205	ENST00000380038	FAM9A	Q8IZU1	332 aa	Predicted RBP	36.16	■■■■□ 3.38
KLC1-205	ENST00000380038	WIZ	O95785	1651 aa		36.04	■■■■□ 3.36
KLC1-205	ENST00000380038	UNC13A	Q9UPW8	1703 aa		35.93	■■■■□ 3.34
KLC1-205	ENST00000380038	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	35.86	■■■■□ 3.33
KLC1-205	ENST00000380038	EHMT2	Q96KQ7	1210 aa		35.8	■■■■□ 3.32
KLC1-205	ENST00000380038	ZEB1	P37275	1124 aa	Predicted RBP	35.78	■■■■□ 3.32
KLC1-205	ENST00000380038	EIF4G1	Q04637	1599 aa	Known RBP	35.71	■■■■□ 3.31
KLC1-205	ENST00000380038	BICRA	Q9NZM4	1560 aa		35.55	■■■■□ 3.28
KLC1-205	ENST00000380038	TOP2A	P11388	1531 aa	Known RBP	35.52	■■■■□ 3.28
KLC1-205	ENST00000380038	PABPN1	Q86U42	306 aa	Known RBP eCLIP	35.5	■■■■□ 3.27
KLC1-205	ENST00000380038	SMARCA4	P51532	1647 aa		35.46	■■■■□ 3.27
KLC1-205	ENST00000380038	CCDC88B	A6NC98	1476 aa		35.4	■■■■□ 3.26
KLC1-205	ENST00000380038	SMARCA2	P51531	1590 aa		35.33	■■■■□ 3.25
KLC1-205	ENST00000380038	ABCC8	Q09428	1581 aa		35.31	■■■■□ 3.24
KLC1-205	ENST00000380038	SOGA1	O94964	1423 aa		35.07	■■■■□ 3.21
KLC1-205	ENST00000380038	WRN	Q14191	1432 aa	Predicted RBP eCLIP	35.06	■■■■□ 3.2
KLC1-205	ENST00000380038	CEP162	Q5TB80	1403 aa		34.99	■■■■□ 3.19
KLC1-205	ENST00000380038	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	34.97	■■■■□ 3.19
KLC1-205	ENST00000380038	TNIK	Q9UKE5	1360 aa		34.96	■■■■□ 3.19
KLC1-205	ENST00000380038	EEA1	Q15075	1411 aa		34.95	■■■■□ 3.18
KLC1-205	ENST00000380038	CSRNP3	Q8WYN3	585 aa		34.9	■■■■□ 3.18
KLC1-205	ENST00000380038	CCER1	Q8TC90	406 aa	Predicted RBP	34.88	■■■■□ 3.17
KLC1-205	ENST00000380038	RUSC2	Q8N2Y8	1516 aa		34.88	■■■■□ 3.17
KLC1-205	ENST00000380038	PEG3	Q9GZU2	1588 aa		34.87	■■■■□ 3.17
KLC1-205	ENST00000380038	UBTF	P17480	764 aa	Known RBP	34.72	■■■■□ 3.15
KLC1-205	ENST00000380038	TTBK1	Q5TCY1	1321 aa	Predicted RBP	34.71	■■■■□ 3.15
KLC1-205	ENST00000380038	ATAD2B	Q9ULI0	1458 aa		34.7	■■■■□ 3.15
KLC1-205	ENST00000380038	GOLGA3	Q08378	1498 aa		34.69	■■■■□ 3.14
KLC1-205	ENST00000380038	SCAF1	Q9H7N4	1312 aa	Known RBP	34.55	■■■■□ 3.12
KLC1-205	ENST00000380038	SYNJ1	O43426	1573 aa		34.55	■■■■□ 3.12
KLC1-205	ENST00000380038	BAZ1B	Q9UIG0	1483 aa	Known RBP	34.54	■■■■□ 3.12
KLC1-205	ENST00000380038	CEP164	Q9UPV0	1460 aa		34.48	■■■■□ 3.11
KLC1-205	ENST00000380038	KIF21B	O75037	1637 aa		34.43	■■■■□ 3.1
KLC1-205	ENST00000380038	DIEXF	Q68CQ4	756 aa	Known RBP	34.32	■■■■□ 3.08
KLC1-205	ENST00000380038	CLIP1	P30622	1438 aa		34.3	■■■■□ 3.08
KLC1-205	ENST00000380038	NCAPD3	P42695	1498 aa		34.22	■■■■□ 3.07
KLC1-205	ENST00000380038	RAPGEF2	Q9Y4G8	1499 aa		34.21	■■■■□ 3.07
KLC1-205	ENST00000380038	VPS8	Q8N3P4	1428 aa		34.19	■■■■□ 3.06
KLC1-205	ENST00000380038	HMGXB3	Q12766	1538 aa		34.18	■■■■□ 3.06
KLC1-205	ENST00000380038	ACIN1	Q9UKV3	1341 aa	Known RBP	34.17	■■■■□ 3.06
KLC1-205	ENST00000380038	TOP2B	Q02880	1626 aa		34.12	■■■■□ 3.05
KLC1-205	ENST00000380038	NEUROD1	Q13562	356 aa		34.1	■■■■□ 3.05
KLC1-205	ENST00000380038	HNRNPUL2	Q1KMD3	747 aa	Known RBP	34.06	■■■■□ 3.04
KLC1-205	ENST00000380038	ZNF316	A6NFI3	1004 aa	Predicted RBP	34.04	■■■■□ 3.04
KLC1-205	ENST00000380038	PELP1	Q8IZL8	1130 aa	Known RBP	34.01	■■■■□ 3.04
KLC1-205	ENST00000380038	APLP2	Q06481	763 aa		33.97	■■■■□ 3.03
KLC1-205	ENST00000380038	BIVM-ERCC5	R4GMW8	1640 aa		33.97	■■■■□ 3.03
KLC1-205	ENST00000380038	CENPB	P07199	599 aa	Predicted RBP	33.92	■■■■□ 3.02
KLC1-205	ENST00000380038	RANGAP1	P46060	587 aa	Predicted RBP	33.92	■■■■□ 3.02
KLC1-205	ENST00000380038	PRX	Q9BXM0	1461 aa		33.89	■■■■□ 3.02
KLC1-205	ENST00000380038	ERICH3	Q5RHP9	1530 aa		33.86	■■■■□ 3.01
KLC1-205	ENST00000380038	CUX1	P39880	1505 aa		33.75	■■■□□ 2.99
KLC1-205	ENST00000380038	GTF3C3	Q9Y5Q9	886 aa		33.75	■■■□□ 2.99
KLC1-205	ENST00000380038	CC2D2A	Q9P2K1	1620 aa		33.75	■■■□□ 2.99
KLC1-205	ENST00000380038	ARAP1	Q96P48	1450 aa		33.74	■■■□□ 2.99
KLC1-205	ENST00000380038	CFTR	P13569	1480 aa		33.69	■■■□□ 2.98
KLC1-205	ENST00000380038	KIF27	Q86VH2	1401 aa		33.65	■■■□□ 2.98
KLC1-205	ENST00000380038	KANK4	Q5T7N3	995 aa	Predicted RBP	33.59	■■■□□ 2.97
KLC1-205	ENST00000380038	MIER1	Q8N108	512 aa		33.57	■■■□□ 2.96
KLC1-205	ENST00000380038	CLSPN	Q9HAW4	1339 aa		33.52	■■■□□ 2.96
KLC1-205	ENST00000380038	DHX57	Q6P158	1386 aa	Known RBP	33.5	■■■□□ 2.95
KLC1-205	ENST00000380038	CADPS	Q9ULU8	1353 aa		33.45	■■■□□ 2.95
KLC1-205	ENST00000380038	RRBP1	Q9P2E9	1410 aa	Known RBP	33.45	■■■□□ 2.95
KLC1-205	ENST00000380038	YTHDC1	Q96MU7	727 aa	Known RBP	33.45	■■■□□ 2.94
KLC1-205	ENST00000380038	ARHGAP35	Q9NRY4	1499 aa		33.42	■■■□□ 2.94
KLC1-205	ENST00000380038	PRDM2	Q13029	1718 aa		33.41	■■■□□ 2.94
KLC1-205	ENST00000380038	IGF1R	P08069	1367 aa		33.31	■■■□□ 2.92
KLC1-205	ENST00000380038	CUX2	O14529	1486 aa		33.3	■■■□□ 2.92
KLC1-205	ENST00000380038	CCNB3	Q8WWL7	1395 aa		33.28	■■■□□ 2.92
KLC1-205	ENST00000380038	CARMIL1	Q5VZK9	1371 aa		33.14	■■■□□ 2.9
KLC1-205	ENST00000380038	FGD5	Q6ZNL6	1462 aa		33.11	■■■□□ 2.89
KLC1-205	ENST00000380038	FANCD2	Q9BXW9	1451 aa		33.11	■■■□□ 2.89
KLC1-205	ENST00000380038	MAP3K1	Q13233	1512 aa		33.1	■■■□□ 2.89
KLC1-205	ENST00000380038	NES	P48681	1621 aa		33.07	■■■□□ 2.88
KLC1-205	ENST00000380038	TIAM1	Q13009	1591 aa		33.07	■■■□□ 2.88
KLC1-205	ENST00000380038	ITGAE	P38570	1179 aa		33.06	■■■□□ 2.88
KLC1-205	ENST00000380038	RAB3GAP2	Q9H2M9	1393 aa		32.99	■■■□□ 2.87
KLC1-205	ENST00000380038	DNAJC5B	Q9UF47	199 aa		32.99	■■■□□ 2.87

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