RNA–Protein interactions for RNA: ENST00000437152.7

SH2D3A-202, Transcript of SH2 domain containing 3A, humanhuman

TSL 2 BASIC

Gene SH2D3A, Length 2,013 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-202ENST00000437152 NISCHQ9Y2I1 1504 aa50.59■■■■■ 5.69
SH2D3A-202ENST00000437152 CCDC180Q9P1Z9 1646 aa44.52■■■■■ 4.72
SH2D3A-202ENST00000437152 ABCC9O60706 1549 aa42.82■■■■■ 4.45
SH2D3A-202ENST00000437152 ZCCHC6Q5VYS8 1495 aaKnown RBP42.32■■■■■ 4.36
SH2D3A-202ENST00000437152 DCAF8L2P0C7V8 631 aa42.06■■■■■ 4.32
SH2D3A-202ENST00000437152 DCAF1Q9Y4B6 1507 aa41.81■■■■■ 4.28
SH2D3A-202ENST00000437152 NACADO15069 1562 aa41.64■■■■■ 4.26
SH2D3A-202ENST00000437152 MYO15BQ96JP2 1530 aa41.63■■■■■ 4.26
SH2D3A-202ENST00000437152 SHROOM4Q9ULL8 1493 aa41.52■■■■■ 4.24
SH2D3A-202ENST00000437152 RB1CC1Q8TDY2 1594 aa41.49■■■■■ 4.23
SH2D3A-202ENST00000437152 SCRIBQ14160 1630 aa40.81■■■■■ 4.12
SH2D3A-202ENST00000437152 UNC13AQ9UPW8 1703 aa40.68■■■■■ 4.1
SH2D3A-202ENST00000437152 SUPT5HO00267 1087 aaKnown RBP40.52■■■■■ 4.08
SH2D3A-202ENST00000437152 BICRAQ9NZM4 1560 aa40.26■■■■■ 4.03
SH2D3A-202ENST00000437152 PABPN1Q86U42 306 aaKnown RBP eCLIP40.21■■■■■ 4.03
SH2D3A-202ENST00000437152 CHIC1Q5VXU3 224 aa39.38■■■■□ 3.89
SH2D3A-202ENST00000437152 CECR2Q9BXF3 1484 aa39.38■■■■□ 3.89
SH2D3A-202ENST00000437152 RSF1Q96T23 1441 aaPredicted RBP39.18■■■■□ 3.86
SH2D3A-202ENST00000437152 BAZ1AQ9NRL2 1556 aaPredicted RBP39.13■■■■□ 3.85
SH2D3A-202ENST00000437152 EIF4G1Q04637 1599 aaKnown RBP39.11■■■■□ 3.85
SH2D3A-202ENST00000437152 SMARCA4P51532 1647 aa39.07■■■■□ 3.85
SH2D3A-202ENST00000437152 MROH2BQ7Z745 1585 aa39.05■■■■□ 3.84
SH2D3A-202ENST00000437152 CC2D2AQ9P2K1 1620 aa38.75■■■■□ 3.79
SH2D3A-202ENST00000437152 WIZO95785 1651 aa38.71■■■■□ 3.79
SH2D3A-202ENST00000437152 PEG3Q9GZU2 1588 aa38.63■■■■□ 3.77
SH2D3A-202ENST00000437152 ATAD2BQ9ULI0 1458 aa38.62■■■■□ 3.77
SH2D3A-202ENST00000437152 SMARCA2P51531 1590 aa38.58■■■■□ 3.77
SH2D3A-202ENST00000437152 DNAJC5BQ9UF47 199 aa38.53■■■■□ 3.76
SH2D3A-202ENST00000437152 NCAPD3P42695 1498 aa38.43■■■■□ 3.74
SH2D3A-202ENST00000437152 BAZ1BQ9UIG0 1483 aaKnown RBP38.36■■■■□ 3.73
SH2D3A-202ENST00000437152 HMGXB3Q12766 1538 aa38.31■■■■□ 3.72
SH2D3A-202ENST00000437152 TOP2AP11388 1531 aaKnown RBP38.25■■■■□ 3.71
SH2D3A-202ENST00000437152 TRIM41Q8WV44 630 aa38.02■■■■□ 3.68
SH2D3A-202ENST00000437152 LOC105371045A0A1W2PR82 267 aa37.92■■■■□ 3.66
SH2D3A-202ENST00000437152 CCDC88BA6NC98 1476 aa37.86■■■■□ 3.65
SH2D3A-202ENST00000437152 CADPSQ9ULU8 1353 aa37.39■■■■□ 3.58
SH2D3A-202ENST00000437152 PCGF6Q9BYE7 350 aa37.37■■■■□ 3.57
SH2D3A-202ENST00000437152 CFTRP13569 1480 aa37.35■■■■□ 3.57
SH2D3A-202ENST00000437152 FAM9AQ8IZU1 332 aaPredicted RBP37.34■■■■□ 3.57
SH2D3A-202ENST00000437152 NESP48681 1621 aa37.34■■■■□ 3.57
SH2D3A-202ENST00000437152 LAMC3Q9Y6N6 1575 aa37.28■■■■□ 3.56
SH2D3A-202ENST00000437152 HRCP23327 699 aa37.2■■■■□ 3.55
SH2D3A-202ENST00000437152 ABCC8Q09428 1581 aa37.19■■■■□ 3.54
SH2D3A-202ENST00000437152 PRDM2Q13029 1718 aa37.17■■■■□ 3.54
SH2D3A-202ENST00000437152 TRIM26Q12899 539 aaPredicted RBP37.1■■■■□ 3.53
SH2D3A-202ENST00000437152 PDS5BQ9NTI5 1447 aa37■■■■□ 3.51
SH2D3A-202ENST00000437152 FANCD2Q9BXW9 1451 aa36.98■■■■□ 3.51
SH2D3A-202ENST00000437152 KIF21AQ7Z4S6 1674 aa36.92■■■■□ 3.5
SH2D3A-202ENST00000437152 EEA1Q15075 1411 aa36.9■■■■□ 3.5
SH2D3A-202ENST00000437152 WRNQ14191 1432 aaPredicted RBP eCLIP36.84■■■■□ 3.49
SH2D3A-202ENST00000437152 CEP164Q9UPV0 1460 aa36.83■■■■□ 3.49
SH2D3A-202ENST00000437152 ERCC6Q03468 1493 aa36.8■■■■□ 3.48
SH2D3A-202ENST00000437152 EHMT2Q96KQ7 1210 aa36.76■■■■□ 3.48
SH2D3A-202ENST00000437152 SOGA1O94964 1423 aa36.74■■■■□ 3.47
SH2D3A-202ENST00000437152 SYNJ1O43426 1573 aa36.63■■■■□ 3.45
SH2D3A-202ENST00000437152 CSRNP3Q8WYN3 585 aa36.61■■■■□ 3.45
SH2D3A-202ENST00000437152 CUX1P39880 1505 aa36.56■■■■□ 3.44
SH2D3A-202ENST00000437152 MRC2Q9UBG0 1479 aa36.56■■■■□ 3.44
SH2D3A-202ENST00000437152 URB2Q14146 1524 aaKnown RBP36.56■■■■□ 3.44
SH2D3A-202ENST00000437152 TNIKQ9UKE5 1360 aa36.55■■■■□ 3.44
SH2D3A-202ENST00000437152 RUSC2Q8N2Y8 1516 aa36.53■■■■□ 3.44
SH2D3A-202ENST00000437152 THOC2Q8NI27 1593 aaKnown RBP36.5■■■■□ 3.43
SH2D3A-202ENST00000437152 DNMBPQ6XZF7 1577 aa36.49■■■■□ 3.43
SH2D3A-202ENST00000437152 TOPBP1Q92547 1522 aa36.49■■■■□ 3.43
SH2D3A-202ENST00000437152 TOP2BQ02880 1626 aa36.47■■■■□ 3.43
SH2D3A-202ENST00000437152 BIVM-ERCC5R4GMW8 1640 aa36.45■■■■□ 3.43
SH2D3A-202ENST00000437152 GOLGA3Q08378 1498 aa36.43■■■■□ 3.42
SH2D3A-202ENST00000437152 CEP162Q5TB80 1403 aa36.43■■■■□ 3.42
SH2D3A-202ENST00000437152 WDR62O43379 1518 aa36.42■■■■□ 3.42
SH2D3A-202ENST00000437152 KIF21BO75037 1637 aa36.34■■■■□ 3.41
SH2D3A-202ENST00000437152 FGD5Q6ZNL6 1462 aa36.3■■■■□ 3.4
SH2D3A-202ENST00000437152 POLA1P09884 1462 aaPredicted RBP36.25■■■■□ 3.39
SH2D3A-202ENST00000437152 UBTFP17480 764 aaKnown RBP36.23■■■■□ 3.39
SH2D3A-202ENST00000437152 ZEB1P37275 1124 aaPredicted RBP36.21■■■■□ 3.39
SH2D3A-202ENST00000437152 PPARGC1BQ86YN6 1023 aaKnown RBP36.13■■■■□ 3.37
SH2D3A-202ENST00000437152 CUX2O14529 1486 aa36.12■■■■□ 3.37
SH2D3A-202ENST00000437152 RAD54L2Q9Y4B4 1467 aa36.12■■■■□ 3.37
SH2D3A-202ENST00000437152 TARBP1Q13395 1621 aaKnown RBP36.02■■■■□ 3.36
SH2D3A-202ENST00000437152 IFT140Q96RY7 1462 aa35.99■■■■□ 3.35
SH2D3A-202ENST00000437152 ABCA10Q8WWZ4 1543 aa35.95■■■■□ 3.35
SH2D3A-202ENST00000437152 RAPGEF2Q9Y4G8 1499 aa35.94■■■■□ 3.34
SH2D3A-202ENST00000437152 WDR97A6NE52 1622 aa35.93■■■■□ 3.34
SH2D3A-202ENST00000437152 ERICH3Q5RHP9 1530 aa35.91■■■■□ 3.34
SH2D3A-202ENST00000437152 CLIP1P30622 1438 aa35.89■■■■□ 3.34
SH2D3A-202ENST00000437152 PRXQ9BXM0 1461 aa35.85■■■■□ 3.33
SH2D3A-202ENST00000437152 TDRD9Q8NDG6 1382 aaKnown RBP35.85■■■■□ 3.33
SH2D3A-202ENST00000437152 ZNF608Q9ULD9 1512 aaPredicted RBP35.84■■■■□ 3.33
SH2D3A-202ENST00000437152 KIF27Q86VH2 1401 aa35.81■■■■□ 3.32
SH2D3A-202ENST00000437152 AQRO60306 1485 aaKnown RBP eCLIP35.76■■■■□ 3.322e-6■■■■■ 26.9
SH2D3A-202ENST00000437152 VPS8Q8N3P4 1428 aa35.74■■■■□ 3.31
SH2D3A-202ENST00000437152 ABCA5Q8WWZ7 1642 aa35.74■■■■□ 3.31
SH2D3A-202ENST00000437152 EIF4G3O43432 1585 aaKnown RBP35.71■■■■□ 3.31
SH2D3A-202ENST00000437152 GAPVD1Q14C86 1478 aa35.71■■■■□ 3.31
SH2D3A-202ENST00000437152 PBRM1Q86U86 1689 aa35.6■■■■□ 3.29
SH2D3A-202ENST00000437152 IGF1RP08069 1367 aa35.57■■■■□ 3.29
SH2D3A-202ENST00000437152 GRIN2BQ13224 1484 aa35.55■■■■□ 3.28
SH2D3A-202ENST00000437152 TTBK1Q5TCY1 1321 aaPredicted RBP35.5■■■■□ 3.27
SH2D3A-202ENST00000437152 CCER1Q8TC90 406 aaPredicted RBP35.44■■■■□ 3.26
SH2D3A-202ENST00000437152 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.43■■■■□ 3.26
SH2D3A-202ENST00000437152 APLP2Q06481 763 aa35.43■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms