Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IFT43Q96FT9 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
IFT43Q96FT9 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.03■□□□□ 0.32
IFT43Q96FT9 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
IFT43Q96FT9 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
IFT43Q96FT9 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IFT43Q96FT9 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
IFT43Q96FT9 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
IFT43Q96FT9 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.02■□□□□ 0.32
IFT43Q96FT9 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.02■□□□□ 0.32
IFT43Q96FT9 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
IFT43Q96FT9 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.02■□□□□ 0.32
IFT43Q96FT9 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
IFT43Q96FT9 AL603756.1-201ENST00000606511 2163 ntBASIC17.02■□□□□ 0.32
IFT43Q96FT9 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.02■□□□□ 0.32
IFT43Q96FT9 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
IFT43Q96FT9 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
IFT43Q96FT9 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.02■□□□□ 0.32
IFT43Q96FT9 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.02■□□□□ 0.32
IFT43Q96FT9 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
IFT43Q96FT9 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
IFT43Q96FT9 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.02■□□□□ 0.32
IFT43Q96FT9 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.02■□□□□ 0.32
IFT43Q96FT9 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
IFT43Q96FT9 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.02■□□□□ 0.32
IFT43Q96FT9 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC17.02■□□□□ 0.32
IFT43Q96FT9 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
IFT43Q96FT9 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
IFT43Q96FT9 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
IFT43Q96FT9 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.02■□□□□ 0.32
IFT43Q96FT9 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
IFT43Q96FT9 AC254562.1-201ENST00000417586 456 ntBASIC17.02■□□□□ 0.32
IFT43Q96FT9 RPS8P6-201ENST00000426177 609 ntBASIC17.02■□□□□ 0.32
IFT43Q96FT9 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.02■□□□□ 0.32
IFT43Q96FT9 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.02■□□□□ 0.32
IFT43Q96FT9 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.02■□□□□ 0.32
IFT43Q96FT9 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.02■□□□□ 0.32
IFT43Q96FT9 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
IFT43Q96FT9 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.32
IFT43Q96FT9 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
IFT43Q96FT9 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
IFT43Q96FT9 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
IFT43Q96FT9 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.31
IFT43Q96FT9 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.02■□□□□ 0.31
IFT43Q96FT9 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
IFT43Q96FT9 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
IFT43Q96FT9 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
IFT43Q96FT9 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
IFT43Q96FT9 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
IFT43Q96FT9 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
IFT43Q96FT9 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
IFT43Q96FT9 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
IFT43Q96FT9 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
IFT43Q96FT9 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
IFT43Q96FT9 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
IFT43Q96FT9 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
IFT43Q96FT9 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
IFT43Q96FT9 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.01■□□□□ 0.31
IFT43Q96FT9 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
IFT43Q96FT9 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
IFT43Q96FT9 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
IFT43Q96FT9 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
IFT43Q96FT9 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
IFT43Q96FT9 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
IFT43Q96FT9 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
IFT43Q96FT9 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
IFT43Q96FT9 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
IFT43Q96FT9 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
IFT43Q96FT9 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.01■□□□□ 0.31
IFT43Q96FT9 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.01■□□□□ 0.31
IFT43Q96FT9 CXCL1P1-201ENST00000502804 216 ntBASIC17.01■□□□□ 0.31
IFT43Q96FT9 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.01■□□□□ 0.31
IFT43Q96FT9 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.01■□□□□ 0.31
IFT43Q96FT9 PDPK2P-202ENST00000562415 1191 ntBASIC17.01■□□□□ 0.31
IFT43Q96FT9 AC018845.2-201ENST00000568326 409 ntBASIC17.01■□□□□ 0.31
IFT43Q96FT9 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
IFT43Q96FT9 AC007064.4-201ENST00000637740 555 ntBASIC17.01■□□□□ 0.31
IFT43Q96FT9 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
IFT43Q96FT9 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
IFT43Q96FT9 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
IFT43Q96FT9 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
IFT43Q96FT9 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
IFT43Q96FT9 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.01■□□□□ 0.31
IFT43Q96FT9 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
IFT43Q96FT9 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.01■□□□□ 0.31
IFT43Q96FT9 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
IFT43Q96FT9 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
IFT43Q96FT9 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
IFT43Q96FT9 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
IFT43Q96FT9 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
IFT43Q96FT9 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.01■□□□□ 0.31
IFT43Q96FT9 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
IFT43Q96FT9 AC022188.1-201ENST00000620960 1664 ntBASIC17.01■□□□□ 0.31
IFT43Q96FT9 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
IFT43Q96FT9 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
IFT43Q96FT9 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
IFT43Q96FT9 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17■□□□□ 0.31
IFT43Q96FT9 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17■□□□□ 0.31
IFT43Q96FT9 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
IFT43Q96FT9 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms