RNA–Protein interactions for RNA: ENST00000406948.7

ACSF3-204, Transcript of acyl-CoA synthetase family member 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ACSF3, Length 2,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSF3-204ENST00000406948 NISCHQ9Y2I1 1504 aa36.45■■■■□ 3.43
ACSF3-204ENST00000406948 CCDC180Q9P1Z9 1646 aa31.66■■■□□ 2.66
ACSF3-204ENST00000406948 ZCCHC6Q5VYS8 1495 aaKnown RBP30.62■■■□□ 2.49
ACSF3-204ENST00000406948 DCAF8L2P0C7V8 631 aa30.21■■■□□ 2.43
ACSF3-204ENST00000406948 ABCC9O60706 1549 aa30.04■■■□□ 2.4
ACSF3-204ENST00000406948 DCAF1Q9Y4B6 1507 aa30.04■■■□□ 2.4
ACSF3-204ENST00000406948 SHROOM4Q9ULL8 1493 aa29.93■■■□□ 2.38
ACSF3-204ENST00000406948 MYO15BQ96JP2 1530 aa29.65■■■□□ 2.34
ACSF3-204ENST00000406948 NACADO15069 1562 aa29.48■■■□□ 2.31
ACSF3-204ENST00000406948 SCRIBQ14160 1630 aa29.26■■■□□ 2.27
ACSF3-204ENST00000406948 RB1CC1Q8TDY2 1594 aa29.22■■■□□ 2.27
ACSF3-204ENST00000406948 SUPT5HO00267 1087 aaKnown RBP28.81■■■□□ 2.2
ACSF3-204ENST00000406948 UNC13AQ9UPW8 1703 aa28.75■■■□□ 2.19
ACSF3-204ENST00000406948 BICRAQ9NZM4 1560 aa28.45■■■□□ 2.15
ACSF3-204ENST00000406948 CECR2Q9BXF3 1484 aa28.42■■■□□ 2.14
ACSF3-204ENST00000406948 PABPN1Q86U42 306 aaKnown RBP eCLIP28.41■■■□□ 2.14
ACSF3-204ENST00000406948 RSF1Q96T23 1441 aaPredicted RBP28.34■■■□□ 2.13
ACSF3-204ENST00000406948 MROH2BQ7Z745 1585 aa28.22■■■□□ 2.11
ACSF3-204ENST00000406948 BAZ1AQ9NRL2 1556 aaPredicted RBP28.09■■■□□ 2.09
ACSF3-204ENST00000406948 WIZO95785 1651 aa28■■■□□ 2.07
ACSF3-204ENST00000406948 SMARCA4P51532 1647 aa28■■■□□ 2.07
ACSF3-204ENST00000406948 CHIC1Q5VXU3 224 aa27.89■■■□□ 2.06
ACSF3-204ENST00000406948 TOP2AP11388 1531 aaKnown RBP27.62■■■□□ 2.01
ACSF3-204ENST00000406948 PEG3Q9GZU2 1588 aa27.62■■■□□ 2.01
ACSF3-204ENST00000406948 EIF4G1Q04637 1599 aaKnown RBP27.55■■■□□ 2
ACSF3-204ENST00000406948 ATAD2BQ9ULI0 1458 aa27.54■■■□□ 2
ACSF3-204ENST00000406948 SMARCA2P51531 1590 aa27.45■■□□□ 1.99
ACSF3-204ENST00000406948 CCDC88BA6NC98 1476 aa27.41■■□□□ 1.98
ACSF3-204ENST00000406948 BAZ1BQ9UIG0 1483 aaKnown RBP27.36■■□□□ 1.97
ACSF3-204ENST00000406948 NCAPD3P42695 1498 aa27.26■■□□□ 1.95
ACSF3-204ENST00000406948 HRCP23327 699 aa27.22■■□□□ 1.95
ACSF3-204ENST00000406948 HMGXB3Q12766 1538 aa27.19■■□□□ 1.94
ACSF3-204ENST00000406948 CC2D2AQ9P2K1 1620 aa27.15■■□□□ 1.94
ACSF3-204ENST00000406948 TRIM41Q8WV44 630 aa27.01■■□□□ 1.91
ACSF3-204ENST00000406948 PCGF6Q9BYE7 350 aa27.01■■□□□ 1.91
ACSF3-204ENST00000406948 LOC105371045A0A1W2PR82 267 aa26.92■■□□□ 1.9
ACSF3-204ENST00000406948 ABCC8Q09428 1581 aa26.91■■□□□ 1.9
ACSF3-204ENST00000406948 CFTRP13569 1480 aa26.69■■□□□ 1.86
ACSF3-204ENST00000406948 TRIM26Q12899 539 aaPredicted RBP26.66■■□□□ 1.86
ACSF3-204ENST00000406948 DNAJC5BQ9UF47 199 aa26.66■■□□□ 1.86
ACSF3-204ENST00000406948 WRNQ14191 1432 aaPredicted RBP eCLIP26.64■■□□□ 1.86
ACSF3-204ENST00000406948 FAM9AQ8IZU1 332 aaPredicted RBP26.61■■□□□ 1.85
ACSF3-204ENST00000406948 CADPSQ9ULU8 1353 aa26.59■■□□□ 1.85
ACSF3-204ENST00000406948 SYNJ1O43426 1573 aa26.58■■□□□ 1.84
ACSF3-204ENST00000406948 PRDM2Q13029 1718 aa26.5■■□□□ 1.83
ACSF3-204ENST00000406948 NESP48681 1621 aa26.43■■□□□ 1.82
ACSF3-204ENST00000406948 SOGA1O94964 1423 aa26.42■■□□□ 1.82
ACSF3-204ENST00000406948 TOP2BQ02880 1626 aa26.4■■□□□ 1.82
ACSF3-204ENST00000406948 PPARGC1BQ86YN6 1023 aaKnown RBP26.39■■□□□ 1.81
ACSF3-204ENST00000406948 CUX1P39880 1505 aa26.37■■□□□ 1.81
ACSF3-204ENST00000406948 BIVM-ERCC5R4GMW8 1640 aa26.36■■□□□ 1.81
ACSF3-204ENST00000406948 RUSC2Q8N2Y8 1516 aa26.35■■□□□ 1.81
ACSF3-204ENST00000406948 EHMT2Q96KQ7 1210 aa26.31■■□□□ 1.8
ACSF3-204ENST00000406948 FANCD2Q9BXW9 1451 aa26.3■■□□□ 1.8
ACSF3-204ENST00000406948 LAMC3Q9Y6N6 1575 aa26.29■■□□□ 1.8
ACSF3-204ENST00000406948 ZEB1P37275 1124 aaPredicted RBP26.25■■□□□ 1.79
ACSF3-204ENST00000406948 EEA1Q15075 1411 aa26.19■■□□□ 1.78
ACSF3-204ENST00000406948 CSRNP3Q8WYN3 585 aa26.16■■□□□ 1.78
ACSF3-204ENST00000406948 CEP164Q9UPV0 1460 aa26.09■■□□□ 1.77
ACSF3-204ENST00000406948 PDS5BQ9NTI5 1447 aa26.09■■□□□ 1.77
ACSF3-204ENST00000406948 FGD5Q6ZNL6 1462 aa26.05■■□□□ 1.76
ACSF3-204ENST00000406948 KIF21AQ7Z4S6 1674 aa26.05■■□□□ 1.76
ACSF3-204ENST00000406948 DNMBPQ6XZF7 1577 aa26.04■■□□□ 1.76
ACSF3-204ENST00000406948 TOPBP1Q92547 1522 aa26.03■■□□□ 1.76
ACSF3-204ENST00000406948 URB2Q14146 1524 aaKnown RBP26.01■■□□□ 1.75
ACSF3-204ENST00000406948 KIF27Q86VH2 1401 aa25.93■■□□□ 1.74
ACSF3-204ENST00000406948 POLA1P09884 1462 aaPredicted RBP25.93■■□□□ 1.74
ACSF3-204ENST00000406948 KIF21BO75037 1637 aa25.91■■□□□ 1.74
ACSF3-204ENST00000406948 GOLGA3Q08378 1498 aa25.9■■□□□ 1.74
ACSF3-204ENST00000406948 CUX2O14529 1486 aa25.89■■□□□ 1.74
ACSF3-204ENST00000406948 RAD54L2Q9Y4B4 1467 aa25.89■■□□□ 1.74
ACSF3-204ENST00000406948 UBTFP17480 764 aaKnown RBP25.86■■□□□ 1.73
ACSF3-204ENST00000406948 RAPGEF2Q9Y4G8 1499 aa25.85■■□□□ 1.73
ACSF3-204ENST00000406948 TNIKQ9UKE5 1360 aa25.85■■□□□ 1.73
ACSF3-204ENST00000406948 PRXQ9BXM0 1461 aa25.81■■□□□ 1.72
ACSF3-204ENST00000406948 ABCA10Q8WWZ4 1543 aa25.78■■□□□ 1.72
ACSF3-204ENST00000406948 MRC2Q9UBG0 1479 aa25.77■■□□□ 1.72
ACSF3-204ENST00000406948 IGF1RP08069 1367 aa25.77■■□□□ 1.72
ACSF3-204ENST00000406948 CEP162Q5TB80 1403 aa25.75■■□□□ 1.71
ACSF3-204ENST00000406948 WDR97A6NE52 1622 aa25.7■■□□□ 1.71
ACSF3-204ENST00000406948 ERICH3Q5RHP9 1530 aa25.7■■□□□ 1.71
ACSF3-204ENST00000406948 ERCC6Q03468 1493 aa25.68■■□□□ 1.7
ACSF3-204ENST00000406948 TARBP1Q13395 1621 aaKnown RBP25.64■■□□□ 1.7
ACSF3-204ENST00000406948 WDR62O43379 1518 aa25.64■■□□□ 1.69
ACSF3-204ENST00000406948 TDRD9Q8NDG6 1382 aaKnown RBP25.63■■□□□ 1.69
ACSF3-204ENST00000406948 CARMIL1Q5VZK9 1371 aa25.61■■□□□ 1.69
ACSF3-204ENST00000406948 ABCA5Q8WWZ7 1642 aa25.58■■□□□ 1.69
ACSF3-204ENST00000406948 THOC2Q8NI27 1593 aaKnown RBP25.57■■□□□ 1.68
ACSF3-204ENST00000406948 GAPVD1Q14C86 1478 aa25.53■■□□□ 1.68
ACSF3-204ENST00000406948 CLIP1P30622 1438 aa25.52■■□□□ 1.68
ACSF3-204ENST00000406948 RANGAP1P46060 587 aaPredicted RBP25.52■■□□□ 1.68
ACSF3-204ENST00000406948 AQRO60306 1485 aaKnown RBP eCLIP25.46■■□□□ 1.673e-6■■■■□ 25.2
ACSF3-204ENST00000406948 CUL7Q14999 1698 aa25.45■■□□□ 1.66
ACSF3-204ENST00000406948 IFT140Q96RY7 1462 aa25.45■■□□□ 1.66
ACSF3-204ENST00000406948 ZNF608Q9ULD9 1512 aaPredicted RBP25.44■■□□□ 1.66
ACSF3-204ENST00000406948 CCER1Q8TC90 406 aaPredicted RBP25.43■■□□□ 1.66
ACSF3-204ENST00000406948 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.39■■□□□ 1.66
ACSF3-204ENST00000406948 PBRM1Q86U86 1689 aa25.37■■□□□ 1.65
ACSF3-204ENST00000406948 ARAP1Q96P48 1450 aa25.3■■□□□ 1.64
ACSF3-204ENST00000406948 VPS8Q8N3P4 1428 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms