Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC34.41■■■■□ 3.1
IFT43Q96FT9 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
IFT43Q96FT9 AL356512.1-201ENST00000607453 1739 ntBASIC33.62■■■□□ 2.97
IFT43Q96FT9 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC33.55■■■□□ 2.96
IFT43Q96FT9 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC33.43■■■□□ 2.94
IFT43Q96FT9 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
IFT43Q96FT9 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
IFT43Q96FT9 HES6-203ENST00000409160 1600 ntTSL 2 BASIC33.2■■■□□ 2.9
IFT43Q96FT9 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC32.88■■■□□ 2.85
IFT43Q96FT9 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC32.85■■■□□ 2.85
IFT43Q96FT9 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC32.83■■■□□ 2.85
IFT43Q96FT9 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC32.71■■■□□ 2.83
IFT43Q96FT9 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC32.7■■■□□ 2.83
IFT43Q96FT9 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC32.63■■■□□ 2.81
IFT43Q96FT9 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC32.31■■■□□ 2.76
IFT43Q96FT9 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC32.24■■■□□ 2.75
IFT43Q96FT9 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
IFT43Q96FT9 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC32■■■□□ 2.71
IFT43Q96FT9 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC31.91■■■□□ 2.7
IFT43Q96FT9 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC31.82■■■□□ 2.68
IFT43Q96FT9 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC31.81■■■□□ 2.68
IFT43Q96FT9 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC31.73■■■□□ 2.67
IFT43Q96FT9 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC31.67■■■□□ 2.66
IFT43Q96FT9 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC31.65■■■□□ 2.66
IFT43Q96FT9 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC31.54■■■□□ 2.64
IFT43Q96FT9 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
IFT43Q96FT9 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC31.5■■■□□ 2.63
IFT43Q96FT9 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC31.44■■■□□ 2.62
IFT43Q96FT9 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
IFT43Q96FT9 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC31.36■■■□□ 2.61
IFT43Q96FT9 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
IFT43Q96FT9 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
IFT43Q96FT9 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
IFT43Q96FT9 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
IFT43Q96FT9 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC31.24■■■□□ 2.59
IFT43Q96FT9 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
IFT43Q96FT9 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC30.95■■■□□ 2.54
IFT43Q96FT9 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
IFT43Q96FT9 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
IFT43Q96FT9 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC30.91■■■□□ 2.54
IFT43Q96FT9 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
IFT43Q96FT9 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC30.9■■■□□ 2.54
IFT43Q96FT9 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC30.86■■■□□ 2.53
IFT43Q96FT9 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC30.84■■■□□ 2.53
IFT43Q96FT9 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
IFT43Q96FT9 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
IFT43Q96FT9 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
IFT43Q96FT9 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC30.78■■■□□ 2.52
IFT43Q96FT9 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
IFT43Q96FT9 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC30.77■■■□□ 2.52
IFT43Q96FT9 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30.73■■■□□ 2.51
IFT43Q96FT9 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
IFT43Q96FT9 INO80B-203ENST00000409917 796 ntTSL 2 BASIC30.65■■■□□ 2.5
IFT43Q96FT9 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
IFT43Q96FT9 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
IFT43Q96FT9 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC30.39■■■□□ 2.46
IFT43Q96FT9 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
IFT43Q96FT9 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC30.37■■■□□ 2.45
IFT43Q96FT9 AC006077.2-201ENST00000623591 457 ntBASIC30.32■■■□□ 2.44
IFT43Q96FT9 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC30.32■■■□□ 2.44
IFT43Q96FT9 AC015813.7-201ENST00000623294 581 ntBASIC30.31■■■□□ 2.44
IFT43Q96FT9 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC30.26■■■□□ 2.43
IFT43Q96FT9 ZNRF2P1-201ENST00000441407 443 ntBASIC30.23■■■□□ 2.43
IFT43Q96FT9 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC30.23■■■□□ 2.43
IFT43Q96FT9 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC30.22■■■□□ 2.43
IFT43Q96FT9 ILK-212ENST00000532063 1617 ntTSL 2 BASIC30.15■■■□□ 2.42
IFT43Q96FT9 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
IFT43Q96FT9 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
IFT43Q96FT9 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC30.04■■■□□ 2.4
IFT43Q96FT9 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
IFT43Q96FT9 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
IFT43Q96FT9 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
IFT43Q96FT9 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC29.96■■■□□ 2.39
IFT43Q96FT9 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
IFT43Q96FT9 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC29.88■■■□□ 2.37
IFT43Q96FT9 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
IFT43Q96FT9 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC29.84■■■□□ 2.37
IFT43Q96FT9 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
IFT43Q96FT9 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
IFT43Q96FT9 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC29.81■■■□□ 2.36
IFT43Q96FT9 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
IFT43Q96FT9 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
IFT43Q96FT9 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC29.76■■■□□ 2.36
IFT43Q96FT9 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC29.76■■■□□ 2.36
IFT43Q96FT9 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC29.76■■■□□ 2.35
IFT43Q96FT9 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
IFT43Q96FT9 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
IFT43Q96FT9 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC29.69■■■□□ 2.34
IFT43Q96FT9 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
IFT43Q96FT9 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
IFT43Q96FT9 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
IFT43Q96FT9 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
IFT43Q96FT9 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
IFT43Q96FT9 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC29.46■■■□□ 2.31
IFT43Q96FT9 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
IFT43Q96FT9 AP002365.1-201ENST00000603448 772 ntBASIC29.46■■■□□ 2.31
IFT43Q96FT9 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC29.43■■■□□ 2.3
IFT43Q96FT9 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
IFT43Q96FT9 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
IFT43Q96FT9 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms