Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
VARSP26640 AC006277.1-201ENST00000624348 1610 ntBASIC16.27■□□□□ 0.19
VARSP26640 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VARSP26640 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.26■□□□□ 0.19
VARSP26640 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
VARSP26640 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
VARSP26640 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.26■□□□□ 0.19
VARSP26640 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
VARSP26640 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VARSP26640 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VARSP26640 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VARSP26640 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
VARSP26640 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VARSP26640 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
VARSP26640 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VARSP26640 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.26■□□□□ 0.19
VARSP26640 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.26■□□□□ 0.19
VARSP26640 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VARSP26640 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
VARSP26640 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.26■□□□□ 0.19
VARSP26640 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.26■□□□□ 0.19
VARSP26640 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.26■□□□□ 0.19
VARSP26640 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VARSP26640 AC112482.1-201ENST00000492080 688 ntBASIC16.26■□□□□ 0.19
VARSP26640 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.26■□□□□ 0.19
VARSP26640 OR7E47P-204ENST00000575924 449 ntBASIC16.26■□□□□ 0.19
VARSP26640 MPDU1-223ENST00000582151 728 ntBASIC16.26■□□□□ 0.19
VARSP26640 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VARSP26640 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VARSP26640 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VARSP26640 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VARSP26640 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
VARSP26640 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VARSP26640 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.26■□□□□ 0.19
VARSP26640 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.26■□□□□ 0.19
VARSP26640 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VARSP26640 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VARSP26640 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VARSP26640 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.26■□□□□ 0.19
VARSP26640 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
VARSP26640 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
VARSP26640 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VARSP26640 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
VARSP26640 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
VARSP26640 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.26■□□□□ 0.19
VARSP26640 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
VARSP26640 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VARSP26640 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.25■□□□□ 0.19
VARSP26640 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
VARSP26640 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
VARSP26640 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
VARSP26640 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
VARSP26640 AL513523.2-202ENST00000427283 2040 ntBASIC16.25■□□□□ 0.19
VARSP26640 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
VARSP26640 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
VARSP26640 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VARSP26640 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VARSP26640 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
VARSP26640 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.25■□□□□ 0.19
VARSP26640 MRPL20P1-201ENST00000400819 433 ntBASIC16.25■□□□□ 0.19
VARSP26640 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.25■□□□□ 0.19
VARSP26640 HMGN1P19-201ENST00000436976 333 ntBASIC16.25■□□□□ 0.19
VARSP26640 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.25■□□□□ 0.19
VARSP26640 AC108751.1-201ENST00000490852 363 ntBASIC16.25■□□□□ 0.19
VARSP26640 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
VARSP26640 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.25■□□□□ 0.19
VARSP26640 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.25■□□□□ 0.19
VARSP26640 UNC93B6-202ENST00000528242 690 ntBASIC16.25■□□□□ 0.19
VARSP26640 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.25■□□□□ 0.19
VARSP26640 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.25■□□□□ 0.19
VARSP26640 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.25■□□□□ 0.19
VARSP26640 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
VARSP26640 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VARSP26640 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
VARSP26640 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
VARSP26640 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
VARSP26640 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VARSP26640 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.25■□□□□ 0.19
VARSP26640 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
VARSP26640 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VARSP26640 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VARSP26640 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
VARSP26640 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.25■□□□□ 0.19
VARSP26640 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
VARSP26640 SLC22A20-204ENST00000530038 1673 ntBASIC16.24■□□□□ 0.19
VARSP26640 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VARSP26640 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
VARSP26640 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
VARSP26640 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.24■□□□□ 0.19
VARSP26640 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
VARSP26640 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.24■□□□□ 0.19
VARSP26640 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.24■□□□□ 0.19
VARSP26640 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VARSP26640 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VARSP26640 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VARSP26640 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
VARSP26640 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VARSP26640 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.24■□□□□ 0.19
VARSP26640 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VARSP26640 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms