RNA–Protein interactions for RNA: ENST00000238856.8

AFTPH-202, Transcript of aftiphilin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene AFTPH, Length 4,040 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFTPH-202ENST00000238856 NISCHQ9Y2I1 1504 aa31.15■■■□□ 2.58
AFTPH-202ENST00000238856 DCAF8L2P0C7V8 631 aa28.73■■■□□ 2.19
AFTPH-202ENST00000238856 SHROOM4Q9ULL8 1493 aa28.67■■■□□ 2.18
AFTPH-202ENST00000238856 SUPT5HO00267 1087 aaKnown RBP28.58■■■□□ 2.17
AFTPH-202ENST00000238856 PCGF6Q9BYE7 350 aa27.12■■□□□ 1.93
AFTPH-202ENST00000238856 EHMT2Q96KQ7 1210 aa27.05■■□□□ 1.92
AFTPH-202ENST00000238856 CHIC1Q5VXU3 224 aa26.79■■□□□ 1.88
AFTPH-202ENST00000238856 FAM9AQ8IZU1 332 aaPredicted RBP26.7■■□□□ 1.87
AFTPH-202ENST00000238856 LOC105371045A0A1W2PR82 267 aa26.57■■□□□ 1.84
AFTPH-202ENST00000238856 HRCP23327 699 aa26.48■■□□□ 1.83
AFTPH-202ENST00000238856 PPARGC1BQ86YN6 1023 aaKnown RBP26.36■■□□□ 1.81
AFTPH-202ENST00000238856 TRIM41Q8WV44 630 aa26.28■■□□□ 1.8
AFTPH-202ENST00000238856 TTBK1Q5TCY1 1321 aaPredicted RBP26.14■■□□□ 1.77
AFTPH-202ENST00000238856 ZCCHC6Q5VYS8 1495 aaKnown RBP26.13■■□□□ 1.77
AFTPH-202ENST00000238856 MYO15BQ96JP2 1530 aa25.99■■□□□ 1.75
AFTPH-202ENST00000238856 TRIM26Q12899 539 aaPredicted RBP25.98■■□□□ 1.75
AFTPH-202ENST00000238856 ZEB1P37275 1124 aaPredicted RBP25.66■■□□□ 1.7
AFTPH-202ENST00000238856 CCER1Q8TC90 406 aaPredicted RBP25.64■■□□□ 1.69
AFTPH-202ENST00000238856 CCDC180Q9P1Z9 1646 aa25.58■■□□□ 1.69
AFTPH-202ENST00000238856 RANGAP1P46060 587 aaPredicted RBP25.51■■□□□ 1.67
AFTPH-202ENST00000238856 UBTFP17480 764 aaKnown RBP25.41■■□□□ 1.66
AFTPH-202ENST00000238856 ABCC9O60706 1549 aa25.39■■□□□ 1.65
AFTPH-202ENST00000238856 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.37■■□□□ 1.65
AFTPH-202ENST00000238856 DCAF1Q9Y4B6 1507 aa25.28■■□□□ 1.64
AFTPH-202ENST00000238856 SCRIBQ14160 1630 aa25.26■■□□□ 1.63
AFTPH-202ENST00000238856 APLP2Q06481 763 aa25.23■■□□□ 1.63
AFTPH-202ENST00000238856 YTHDC1Q96MU7 727 aaKnown RBP25.08■■□□□ 1.61
AFTPH-202ENST00000238856 RSF1Q96T23 1441 aaPredicted RBP25.04■■□□□ 1.6
AFTPH-202ENST00000238856 CENPBP07199 599 aaPredicted RBP25.01■■□□□ 1.59
AFTPH-202ENST00000238856 HNRNPUL2Q1KMD3 747 aaKnown RBP24.97■■□□□ 1.59
AFTPH-202ENST00000238856 PABPN1Q86U42 306 aaKnown RBP eCLIP24.95■■□□□ 1.58
AFTPH-202ENST00000238856 DIEXFQ68CQ4 756 aaKnown RBP24.84■■□□□ 1.57
AFTPH-202ENST00000238856 PELP1Q8IZL8 1130 aaKnown RBP24.71■■□□□ 1.55
AFTPH-202ENST00000238856 CECR2Q9BXF3 1484 aa24.68■■□□□ 1.54
AFTPH-202ENST00000238856 RB1CC1Q8TDY2 1594 aa24.64■■□□□ 1.53
AFTPH-202ENST00000238856 ITGAEP38570 1179 aa24.61■■□□□ 1.53
AFTPH-202ENST00000238856 ATP1B4Q9UN42 357 aaPredicted RBP24.61■■□□□ 1.53
AFTPH-202ENST00000238856 CSRNP3Q8WYN3 585 aa24.6■■□□□ 1.53
AFTPH-202ENST00000238856 SCAF1Q9H7N4 1312 aaKnown RBP24.58■■□□□ 1.52
AFTPH-202ENST00000238856 GTF3C3Q9Y5Q9 886 aa24.58■■□□□ 1.52
AFTPH-202ENST00000238856 ACIN1Q9UKV3 1341 aaKnown RBP24.47■■□□□ 1.51
AFTPH-202ENST00000238856 NEUROD1Q13562 356 aa24.44■■□□□ 1.5
AFTPH-202ENST00000238856 MROH2BQ7Z745 1585 aa24.4■■□□□ 1.5
AFTPH-202ENST00000238856 ZNF316A6NFI3 1004 aaPredicted RBP24.37■■□□□ 1.49
AFTPH-202ENST00000238856 CEP162Q5TB80 1403 aa24.23■■□□□ 1.47
AFTPH-202ENST00000238856 NACADO15069 1562 aa24.21■■□□□ 1.47
AFTPH-202ENST00000238856 WIZO95785 1651 aa24.17■■□□□ 1.46
AFTPH-202ENST00000238856 SOGA1O94964 1423 aa24.17■■□□□ 1.46
AFTPH-202ENST00000238856 ABCC8Q09428 1581 aa24.14■■□□□ 1.46
AFTPH-202ENST00000238856 CCDC88BA6NC98 1476 aa24.1■■□□□ 1.45
AFTPH-202ENST00000238856 MIER1Q8N108 512 aa24.06■■□□□ 1.44
AFTPH-202ENST00000238856 BAZ1AQ9NRL2 1556 aaPredicted RBP24.02■■□□□ 1.44
AFTPH-202ENST00000238856 TNIKQ9UKE5 1360 aa23.99■■□□□ 1.43
AFTPH-202ENST00000238856 FAM50AQ14320 339 aaKnown RBP23.99■■□□□ 1.43
AFTPH-202ENST00000238856 CLIP1P30622 1438 aa23.96■■□□□ 1.43
AFTPH-202ENST00000238856 P3H3Q8IVL6 736 aa23.94■■□□□ 1.42
AFTPH-202ENST00000238856 WRNQ14191 1432 aaPredicted RBP eCLIP23.93■■□□□ 1.42
AFTPH-202ENST00000238856 GOLGA3Q08378 1498 aa23.89■■□□□ 1.42
AFTPH-202ENST00000238856 RUSC2Q8N2Y8 1516 aa23.86■■□□□ 1.41
AFTPH-202ENST00000238856 BCANQ96GW7 911 aa23.83■■□□□ 1.41
AFTPH-202ENST00000238856 EEA1Q15075 1411 aa23.81■■□□□ 1.4
AFTPH-202ENST00000238856 NEFLP07196 543 aa23.8■■□□□ 1.4
AFTPH-202ENST00000238856 CNGB1Q14028 1251 aaPredicted RBP23.7■■□□□ 1.38
AFTPH-202ENST00000238856 CEP164Q9UPV0 1460 aa23.67■■□□□ 1.38
AFTPH-202ENST00000238856 TOP2AP11388 1531 aaKnown RBP23.66■■□□□ 1.38
AFTPH-202ENST00000238856 HIRIP3Q9BW71 556 aaPredicted RBP23.62■■□□□ 1.37
AFTPH-202ENST00000238856 BAZ1BQ9UIG0 1483 aaKnown RBP23.6■■□□□ 1.37
AFTPH-202ENST00000238856 DDX10Q13206 875 aaKnown RBP23.59■■□□□ 1.37
AFTPH-202ENST00000238856 MYT1Q01538 1121 aa23.58■■□□□ 1.36
AFTPH-202ENST00000238856 KANK4Q5T7N3 995 aaPredicted RBP23.56■■□□□ 1.36
AFTPH-202ENST00000238856 SMARCA4P51532 1647 aa23.53■■□□□ 1.36
AFTPH-202ENST00000238856 POLR3GLQ9BT43 218 aa23.53■■□□□ 1.36
AFTPH-202ENST00000238856 ARID3CA6NKF2 412 aa23.51■■□□□ 1.35
AFTPH-202ENST00000238856 VPS8Q8N3P4 1428 aa23.49■■□□□ 1.35
AFTPH-202ENST00000238856 SMARCA2P51531 1590 aa23.48■■□□□ 1.35
AFTPH-202ENST00000238856 TRIM52Q96A61 297 aa23.46■■□□□ 1.35
AFTPH-202ENST00000238856 RAPGEF2Q9Y4G8 1499 aa23.44■■□□□ 1.34
AFTPH-202ENST00000238856 ERICH6Q7L0X2 663 aa23.43■■□□□ 1.34
AFTPH-202ENST00000238856 ANP32CO43423 234 aa23.42■■□□□ 1.34
AFTPH-202ENST00000238856 FKBP8Q14318 412 aa23.38■■□□□ 1.33
AFTPH-202ENST00000238856 SIN3AQ96ST3 1273 aa23.38■■□□□ 1.33
AFTPH-202ENST00000238856 KIF27Q86VH2 1401 aa23.31■■□□□ 1.32
AFTPH-202ENST00000238856 CHIC2Q9UKJ5 165 aa23.26■■□□□ 1.31
AFTPH-202ENST00000238856 CCNB3Q8WWL7 1395 aa23.24■■□□□ 1.31
AFTPH-202ENST00000238856 ATAD2BQ9ULI0 1458 aa23.24■■□□□ 1.31
AFTPH-202ENST00000238856 TONSLQ96HA7 1378 aa23.21■■□□□ 1.31
AFTPH-202ENST00000238856 SUPT16HQ9Y5B9 1047 aaKnown RBP23.2■■□□□ 1.3
AFTPH-202ENST00000238856 ZNF326Q5BKZ1 582 aaKnown RBP23.19■■□□□ 1.3
AFTPH-202ENST00000238856 KCNH8Q96L42 1107 aa23.17■■□□□ 1.3
AFTPH-202ENST00000238856 CLSPNQ9HAW4 1339 aa23.16■■□□□ 1.3
AFTPH-202ENST00000238856 DHX57Q6P158 1386 aaKnown RBP23.15■■□□□ 1.3
AFTPH-202ENST00000238856 HNRNPUQ00839 825 aaKnown RBP eCLIP23.12■■□□□ 1.29
AFTPH-202ENST00000238856 CUX2O14529 1486 aa23.12■■□□□ 1.29
AFTPH-202ENST00000238856 IRX6P78412 446 aaPredicted RBP23.11■■□□□ 1.29
AFTPH-202ENST00000238856 SYNJ1O43426 1573 aa23.11■■□□□ 1.29
AFTPH-202ENST00000238856 RRP7BPQ9NSQ0 103 aa23.09■■□□□ 1.29
AFTPH-202ENST00000238856 MTUS2Q5JR59 1369 aa23.08■■□□□ 1.29
AFTPH-202ENST00000238856 RAB3GAP2Q9H2M9 1393 aa23.07■■□□□ 1.28
AFTPH-202ENST00000238856 CARMIL1Q5VZK9 1371 aa23.06■■□□□ 1.28
AFTPH-202ENST00000238856 KIF21BO75037 1637 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms