RNA–Protein interactions for RNA: ENST00000510576.6

CLMAT3-201, colorectal liver metastasis associated transcript 3, humanhuman

TSL 1 (best) BASIC

Gene CLMAT3, Length 1,973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMAT3-201ENST00000510576 NISCHQ9Y2I1 1504 aa35.62■■■■□ 3.29
CLMAT3-201ENST00000510576 CCDC180Q9P1Z9 1646 aa30.69■■■□□ 2.5
CLMAT3-201ENST00000510576 ZCCHC6Q5VYS8 1495 aaKnown RBP30.07■■■□□ 2.4
CLMAT3-201ENST00000510576 SHROOM4Q9ULL8 1493 aa29.76■■■□□ 2.35
CLMAT3-201ENST00000510576 DCAF1Q9Y4B6 1507 aa29.38■■■□□ 2.29
CLMAT3-201ENST00000510576 DCAF8L2P0C7V8 631 aa29.3■■■□□ 2.28
CLMAT3-201ENST00000510576 ABCC9O60706 1549 aa29.02■■■□□ 2.24
CLMAT3-201ENST00000510576 SUPT5HO00267 1087 aaKnown RBP28.99■■■□□ 2.23
CLMAT3-201ENST00000510576 MYO15BQ96JP2 1530 aa28.7■■■□□ 2.19
CLMAT3-201ENST00000510576 SCRIBQ14160 1630 aa28.45■■■□□ 2.15
CLMAT3-201ENST00000510576 NACADO15069 1562 aa28.38■■■□□ 2.13
CLMAT3-201ENST00000510576 CHIC1Q5VXU3 224 aa28.09■■■□□ 2.09
CLMAT3-201ENST00000510576 RB1CC1Q8TDY2 1594 aa28■■■□□ 2.07
CLMAT3-201ENST00000510576 RSF1Q96T23 1441 aaPredicted RBP27.94■■■□□ 2.06
CLMAT3-201ENST00000510576 CECR2Q9BXF3 1484 aa27.66■■■□□ 2.02
CLMAT3-201ENST00000510576 MROH2BQ7Z745 1585 aa27.59■■■□□ 2.01
CLMAT3-201ENST00000510576 UNC13AQ9UPW8 1703 aa27.57■■■□□ 2
CLMAT3-201ENST00000510576 WIZO95785 1651 aa27.46■■□□□ 1.99
CLMAT3-201ENST00000510576 BAZ1AQ9NRL2 1556 aaPredicted RBP27.45■■□□□ 1.98
CLMAT3-201ENST00000510576 BICRAQ9NZM4 1560 aa27.26■■□□□ 1.95
CLMAT3-201ENST00000510576 SMARCA4P51532 1647 aa27.26■■□□□ 1.95
CLMAT3-201ENST00000510576 PABPN1Q86U42 306 aaKnown RBP eCLIP27.25■■□□□ 1.95
CLMAT3-201ENST00000510576 TRIM41Q8WV44 630 aa27.14■■□□□ 1.94
CLMAT3-201ENST00000510576 TOP2AP11388 1531 aaKnown RBP27.12■■□□□ 1.93
CLMAT3-201ENST00000510576 LOC105371045A0A1W2PR82 267 aa27.11■■□□□ 1.93
CLMAT3-201ENST00000510576 EIF4G1Q04637 1599 aaKnown RBP27■■□□□ 1.91
CLMAT3-201ENST00000510576 SMARCA2P51531 1590 aa26.91■■□□□ 1.9
CLMAT3-201ENST00000510576 CCDC88BA6NC98 1476 aa26.87■■□□□ 1.89
CLMAT3-201ENST00000510576 PEG3Q9GZU2 1588 aa26.81■■□□□ 1.88
CLMAT3-201ENST00000510576 FAM9AQ8IZU1 332 aaPredicted RBP26.76■■□□□ 1.87
CLMAT3-201ENST00000510576 PCGF6Q9BYE7 350 aa26.7■■□□□ 1.86
CLMAT3-201ENST00000510576 ABCC8Q09428 1581 aa26.63■■□□□ 1.85
CLMAT3-201ENST00000510576 ATAD2BQ9ULI0 1458 aa26.58■■□□□ 1.85
CLMAT3-201ENST00000510576 HRCP23327 699 aa26.53■■□□□ 1.84
CLMAT3-201ENST00000510576 BAZ1BQ9UIG0 1483 aaKnown RBP26.51■■□□□ 1.83
CLMAT3-201ENST00000510576 TRIM26Q12899 539 aaPredicted RBP26.44■■□□□ 1.82
CLMAT3-201ENST00000510576 EHMT2Q96KQ7 1210 aa26.42■■□□□ 1.82
CLMAT3-201ENST00000510576 WRNQ14191 1432 aaPredicted RBP eCLIP26.29■■□□□ 1.8
CLMAT3-201ENST00000510576 EEA1Q15075 1411 aa26.28■■□□□ 1.8
CLMAT3-201ENST00000510576 SOGA1O94964 1423 aa26.25■■□□□ 1.79
CLMAT3-201ENST00000510576 DNAJC5BQ9UF47 199 aa26.24■■□□□ 1.79
CLMAT3-201ENST00000510576 HMGXB3Q12766 1538 aa26.23■■□□□ 1.79
CLMAT3-201ENST00000510576 CC2D2AQ9P2K1 1620 aa26.22■■□□□ 1.79
CLMAT3-201ENST00000510576 SYNJ1O43426 1573 aa26.2■■□□□ 1.78
CLMAT3-201ENST00000510576 NCAPD3P42695 1498 aa26.17■■□□□ 1.78
CLMAT3-201ENST00000510576 RUSC2Q8N2Y8 1516 aa26.12■■□□□ 1.77
CLMAT3-201ENST00000510576 CSRNP3Q8WYN3 585 aa26.09■■□□□ 1.77
CLMAT3-201ENST00000510576 TNIKQ9UKE5 1360 aa26.04■■□□□ 1.76
CLMAT3-201ENST00000510576 CEP162Q5TB80 1403 aa26.01■■□□□ 1.75
CLMAT3-201ENST00000510576 GOLGA3Q08378 1498 aa26■■□□□ 1.75
CLMAT3-201ENST00000510576 TOP2BQ02880 1626 aa25.99■■□□□ 1.75
CLMAT3-201ENST00000510576 BIVM-ERCC5R4GMW8 1640 aa25.96■■□□□ 1.75
CLMAT3-201ENST00000510576 KIF21BO75037 1637 aa25.95■■□□□ 1.74
CLMAT3-201ENST00000510576 CEP164Q9UPV0 1460 aa25.91■■□□□ 1.74
CLMAT3-201ENST00000510576 UBTFP17480 764 aaKnown RBP25.89■■□□□ 1.74
CLMAT3-201ENST00000510576 PPARGC1BQ86YN6 1023 aaKnown RBP25.87■■□□□ 1.73
CLMAT3-201ENST00000510576 PRDM2Q13029 1718 aa25.85■■□□□ 1.73
CLMAT3-201ENST00000510576 CFTRP13569 1480 aa25.83■■□□□ 1.73
CLMAT3-201ENST00000510576 ZEB1P37275 1124 aaPredicted RBP25.77■■□□□ 1.72
CLMAT3-201ENST00000510576 CUX1P39880 1505 aa25.75■■□□□ 1.71
CLMAT3-201ENST00000510576 RAPGEF2Q9Y4G8 1499 aa25.68■■□□□ 1.7
CLMAT3-201ENST00000510576 CLIP1P30622 1438 aa25.62■■□□□ 1.69
CLMAT3-201ENST00000510576 ERICH3Q5RHP9 1530 aa25.61■■□□□ 1.69
CLMAT3-201ENST00000510576 CADPSQ9ULU8 1353 aa25.59■■□□□ 1.69
CLMAT3-201ENST00000510576 PRXQ9BXM0 1461 aa25.55■■□□□ 1.68
CLMAT3-201ENST00000510576 KIF27Q86VH2 1401 aa25.54■■□□□ 1.68
CLMAT3-201ENST00000510576 TTBK1Q5TCY1 1321 aaPredicted RBP25.5■■□□□ 1.67
CLMAT3-201ENST00000510576 VPS8Q8N3P4 1428 aa25.5■■□□□ 1.67
CLMAT3-201ENST00000510576 FANCD2Q9BXW9 1451 aa25.35■■□□□ 1.65
CLMAT3-201ENST00000510576 FGD5Q6ZNL6 1462 aa25.35■■□□□ 1.65
CLMAT3-201ENST00000510576 CUX2O14529 1486 aa25.34■■□□□ 1.65
CLMAT3-201ENST00000510576 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.33■■□□□ 1.65
CLMAT3-201ENST00000510576 RANGAP1P46060 587 aaPredicted RBP25.33■■□□□ 1.65
CLMAT3-201ENST00000510576 CCER1Q8TC90 406 aaPredicted RBP25.32■■□□□ 1.64
CLMAT3-201ENST00000510576 NESP48681 1621 aa25.31■■□□□ 1.64
CLMAT3-201ENST00000510576 APLP2Q06481 763 aa25.3■■□□□ 1.64
CLMAT3-201ENST00000510576 ARAP1Q96P48 1450 aa25.28■■□□□ 1.64
CLMAT3-201ENST00000510576 DNMBPQ6XZF7 1577 aa25.26■■□□□ 1.63
CLMAT3-201ENST00000510576 IGF1RP08069 1367 aa25.22■■□□□ 1.63
CLMAT3-201ENST00000510576 LAMC3Q9Y6N6 1575 aa25.2■■□□□ 1.62
CLMAT3-201ENST00000510576 TOPBP1Q92547 1522 aa25.16■■□□□ 1.62
CLMAT3-201ENST00000510576 CARMIL1Q5VZK9 1371 aa25.13■■□□□ 1.61
CLMAT3-201ENST00000510576 ARHGAP35Q9NRY4 1499 aa25.12■■□□□ 1.61
CLMAT3-201ENST00000510576 POLA1P09884 1462 aaPredicted RBP25.1■■□□□ 1.61
CLMAT3-201ENST00000510576 ABCA10Q8WWZ4 1543 aa25.1■■□□□ 1.61
CLMAT3-201ENST00000510576 RAD54L2Q9Y4B4 1467 aa25.06■■□□□ 1.6
CLMAT3-201ENST00000510576 HNRNPUL2Q1KMD3 747 aaKnown RBP25.02■■□□□ 1.6
CLMAT3-201ENST00000510576 CUL7Q14999 1698 aa25■■□□□ 1.59
CLMAT3-201ENST00000510576 WDR97A6NE52 1622 aa25■■□□□ 1.59
CLMAT3-201ENST00000510576 URB2Q14146 1524 aaKnown RBP25■■□□□ 1.59
CLMAT3-201ENST00000510576 PDS5BQ9NTI5 1447 aa24.97■■□□□ 1.59
CLMAT3-201ENST00000510576 KIF21AQ7Z4S6 1674 aa24.94■■□□□ 1.58
CLMAT3-201ENST00000510576 KANK4Q5T7N3 995 aaPredicted RBP24.93■■□□□ 1.58
CLMAT3-201ENST00000510576 CTTNBP2Q8WZ74 1663 aa24.89■■□□□ 1.58
CLMAT3-201ENST00000510576 ERCC6Q03468 1493 aa24.88■■□□□ 1.57
CLMAT3-201ENST00000510576 MAP3K1Q13233 1512 aa24.87■■□□□ 1.57
CLMAT3-201ENST00000510576 ABCA5Q8WWZ7 1642 aa24.87■■□□□ 1.57
CLMAT3-201ENST00000510576 TIAM1Q13009 1591 aa24.85■■□□□ 1.57
CLMAT3-201ENST00000510576 RRBP1Q9P2E9 1410 aaKnown RBP24.84■■□□□ 1.57
CLMAT3-201ENST00000510576 FHAD1B1AJZ9 1412 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms