Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.87□□□□□ -0.03
FNDC9Q8TBE3 SNX33P1-201ENST00000592116 1762 ntBASIC14.87□□□□□ -0.03
FNDC9Q8TBE3 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
FNDC9Q8TBE3 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.87□□□□□ -0.03
FNDC9Q8TBE3 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FNDC9Q8TBE3 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.87□□□□□ -0.03
FNDC9Q8TBE3 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
FNDC9Q8TBE3 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
FNDC9Q8TBE3 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.87□□□□□ -0.03
FNDC9Q8TBE3 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
FNDC9Q8TBE3 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
FNDC9Q8TBE3 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.87□□□□□ -0.03
FNDC9Q8TBE3 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
FNDC9Q8TBE3 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FNDC9Q8TBE3 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
FNDC9Q8TBE3 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.87□□□□□ -0.03
FNDC9Q8TBE3 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FNDC9Q8TBE3 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.87□□□□□ -0.03
FNDC9Q8TBE3 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.86□□□□□ -0.03
FNDC9Q8TBE3 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
FNDC9Q8TBE3 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
FNDC9Q8TBE3 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
FNDC9Q8TBE3 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.86□□□□□ -0.03
FNDC9Q8TBE3 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FNDC9Q8TBE3 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FNDC9Q8TBE3 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
FNDC9Q8TBE3 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
FNDC9Q8TBE3 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
FNDC9Q8TBE3 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
FNDC9Q8TBE3 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
FNDC9Q8TBE3 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
FNDC9Q8TBE3 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FNDC9Q8TBE3 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
FNDC9Q8TBE3 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FNDC9Q8TBE3 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FNDC9Q8TBE3 KRT8P39-201ENST00000396270 1433 ntBASIC14.86□□□□□ -0.03
FNDC9Q8TBE3 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
FNDC9Q8TBE3 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FNDC9Q8TBE3 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.86□□□□□ -0.03
FNDC9Q8TBE3 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FNDC9Q8TBE3 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
FNDC9Q8TBE3 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FNDC9Q8TBE3 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FNDC9Q8TBE3 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
FNDC9Q8TBE3 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.86□□□□□ -0.03
FNDC9Q8TBE3 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FNDC9Q8TBE3 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.86□□□□□ -0.03
FNDC9Q8TBE3 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.86□□□□□ -0.03
FNDC9Q8TBE3 PMS2P2-201ENST00000425039 1128 ntBASIC14.86□□□□□ -0.03
FNDC9Q8TBE3 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.86□□□□□ -0.03
FNDC9Q8TBE3 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.86□□□□□ -0.03
FNDC9Q8TBE3 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
FNDC9Q8TBE3 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
FNDC9Q8TBE3 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
FNDC9Q8TBE3 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.86□□□□□ -0.03
FNDC9Q8TBE3 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.86□□□□□ -0.03
FNDC9Q8TBE3 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.86□□□□□ -0.03
FNDC9Q8TBE3 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.86□□□□□ -0.03
FNDC9Q8TBE3 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
FNDC9Q8TBE3 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FNDC9Q8TBE3 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.86□□□□□ -0.03
FNDC9Q8TBE3 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FNDC9Q8TBE3 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.86□□□□□ -0.03
FNDC9Q8TBE3 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.86□□□□□ -0.03
FNDC9Q8TBE3 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FNDC9Q8TBE3 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
FNDC9Q8TBE3 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
FNDC9Q8TBE3 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FNDC9Q8TBE3 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FNDC9Q8TBE3 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.85□□□□□ -0.03
FNDC9Q8TBE3 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
FNDC9Q8TBE3 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
FNDC9Q8TBE3 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.85□□□□□ -0.03
FNDC9Q8TBE3 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
FNDC9Q8TBE3 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.85□□□□□ -0.03
FNDC9Q8TBE3 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FNDC9Q8TBE3 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FNDC9Q8TBE3 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FNDC9Q8TBE3 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
FNDC9Q8TBE3 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FNDC9Q8TBE3 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FNDC9Q8TBE3 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
FNDC9Q8TBE3 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.85□□□□□ -0.03
FNDC9Q8TBE3 AL627223.1-201ENST00000416693 442 ntBASIC14.85□□□□□ -0.03
FNDC9Q8TBE3 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.85□□□□□ -0.03
FNDC9Q8TBE3 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.85□□□□□ -0.03
FNDC9Q8TBE3 SPCS2P4-201ENST00000436160 681 ntBASIC14.85□□□□□ -0.03
FNDC9Q8TBE3 AC023141.5-201ENST00000458585 616 ntBASIC14.85□□□□□ -0.03
FNDC9Q8TBE3 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
FNDC9Q8TBE3 IGHV3-62-201ENST00000520057 340 ntBASIC14.85□□□□□ -0.03
FNDC9Q8TBE3 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.85□□□□□ -0.03
FNDC9Q8TBE3 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.85□□□□□ -0.03
FNDC9Q8TBE3 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.85□□□□□ -0.03
FNDC9Q8TBE3 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.85□□□□□ -0.03
FNDC9Q8TBE3 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.85□□□□□ -0.03
FNDC9Q8TBE3 AL603756.1-201ENST00000606511 2163 ntBASIC14.85□□□□□ -0.03
FNDC9Q8TBE3 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FNDC9Q8TBE3 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
FNDC9Q8TBE3 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FNDC9Q8TBE3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms