RNA–Protein interactions for RNA: ENST00000460606.1

AC009163.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC009163.2, Length 2,125 nt, Biotype nonsense mediated decay.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009163.2-201ENST00000460606 NISCHQ9Y2I1 1504 aa38.6■■■■□ 3.77
AC009163.2-201ENST00000460606 CCDC180Q9P1Z9 1646 aa33.74■■■□□ 2.99
AC009163.2-201ENST00000460606 ABCC9O60706 1549 aa32.62■■■□□ 2.81
AC009163.2-201ENST00000460606 DCAF8L2P0C7V8 631 aa32.34■■■□□ 2.77
AC009163.2-201ENST00000460606 ZCCHC6Q5VYS8 1495 aaKnown RBP32.31■■■□□ 2.76
AC009163.2-201ENST00000460606 DCAF1Q9Y4B6 1507 aa31.76■■■□□ 2.67
AC009163.2-201ENST00000460606 NACADO15069 1562 aa31.58■■■□□ 2.65
AC009163.2-201ENST00000460606 MYO15BQ96JP2 1530 aa31.52■■■□□ 2.64
AC009163.2-201ENST00000460606 SHROOM4Q9ULL8 1493 aa31.46■■■□□ 2.63
AC009163.2-201ENST00000460606 RB1CC1Q8TDY2 1594 aa31.46■■■□□ 2.63
AC009163.2-201ENST00000460606 SCRIBQ14160 1630 aa31.2■■■□□ 2.59
AC009163.2-201ENST00000460606 UNC13AQ9UPW8 1703 aa30.85■■■□□ 2.53
AC009163.2-201ENST00000460606 PABPN1Q86U42 306 aaKnown RBP eCLIP30.76■■■□□ 2.51
AC009163.2-201ENST00000460606 BICRAQ9NZM4 1560 aa30.58■■■□□ 2.49
AC009163.2-201ENST00000460606 CECR2Q9BXF3 1484 aa30.15■■■□□ 2.42
AC009163.2-201ENST00000460606 SUPT5HO00267 1087 aaKnown RBP30.01■■■□□ 2.39
AC009163.2-201ENST00000460606 MROH2BQ7Z745 1585 aa29.88■■■□□ 2.37
AC009163.2-201ENST00000460606 RSF1Q96T23 1441 aaPredicted RBP29.82■■■□□ 2.36
AC009163.2-201ENST00000460606 BAZ1AQ9NRL2 1556 aaPredicted RBP29.81■■■□□ 2.36
AC009163.2-201ENST00000460606 SMARCA4P51532 1647 aa29.77■■■□□ 2.36
AC009163.2-201ENST00000460606 EIF4G1Q04637 1599 aaKnown RBP29.71■■■□□ 2.35
AC009163.2-201ENST00000460606 WIZO95785 1651 aa29.62■■■□□ 2.33
AC009163.2-201ENST00000460606 ATAD2BQ9ULI0 1458 aa29.42■■■□□ 2.3
AC009163.2-201ENST00000460606 CC2D2AQ9P2K1 1620 aa29.4■■■□□ 2.3
AC009163.2-201ENST00000460606 PEG3Q9GZU2 1588 aa29.33■■■□□ 2.29
AC009163.2-201ENST00000460606 SMARCA2P51531 1590 aa29.32■■■□□ 2.28
AC009163.2-201ENST00000460606 DNAJC5BQ9UF47 199 aa29.27■■■□□ 2.28
AC009163.2-201ENST00000460606 BAZ1BQ9UIG0 1483 aaKnown RBP29.25■■■□□ 2.27
AC009163.2-201ENST00000460606 TOP2AP11388 1531 aaKnown RBP29.2■■■□□ 2.26
AC009163.2-201ENST00000460606 NCAPD3P42695 1498 aa29.18■■■□□ 2.26
AC009163.2-201ENST00000460606 HMGXB3Q12766 1538 aa29.07■■■□□ 2.24
AC009163.2-201ENST00000460606 CCDC88BA6NC98 1476 aa28.97■■■□□ 2.23
AC009163.2-201ENST00000460606 NESP48681 1621 aa28.5■■■□□ 2.15
AC009163.2-201ENST00000460606 CADPSQ9ULU8 1353 aa28.47■■■□□ 2.15
AC009163.2-201ENST00000460606 CFTRP13569 1480 aa28.44■■■□□ 2.14
AC009163.2-201ENST00000460606 CHIC1Q5VXU3 224 aa28.36■■■□□ 2.13
AC009163.2-201ENST00000460606 ABCC8Q09428 1581 aa28.29■■■□□ 2.12
AC009163.2-201ENST00000460606 LAMC3Q9Y6N6 1575 aa28.25■■■□□ 2.11
AC009163.2-201ENST00000460606 FANCD2Q9BXW9 1451 aa28.18■■■□□ 2.1
AC009163.2-201ENST00000460606 PRDM2Q13029 1718 aa28.16■■■□□ 2.1
AC009163.2-201ENST00000460606 TRIM41Q8WV44 630 aa28.14■■■□□ 2.1
AC009163.2-201ENST00000460606 PDS5BQ9NTI5 1447 aa28.1■■■□□ 2.09
AC009163.2-201ENST00000460606 WRNQ14191 1432 aaPredicted RBP eCLIP28.08■■■□□ 2.09
AC009163.2-201ENST00000460606 KIF21AQ7Z4S6 1674 aa28.05■■■□□ 2.08
AC009163.2-201ENST00000460606 CEP164Q9UPV0 1460 aa28.03■■■□□ 2.08
AC009163.2-201ENST00000460606 SYNJ1O43426 1573 aa28■■■□□ 2.07
AC009163.2-201ENST00000460606 ERCC6Q03468 1493 aa27.97■■■□□ 2.07
AC009163.2-201ENST00000460606 CUX1P39880 1505 aa27.95■■■□□ 2.07
AC009163.2-201ENST00000460606 URB2Q14146 1524 aaKnown RBP27.87■■■□□ 2.05
AC009163.2-201ENST00000460606 TOP2BQ02880 1626 aa27.84■■■□□ 2.05
AC009163.2-201ENST00000460606 TOPBP1Q92547 1522 aa27.81■■■□□ 2.04
AC009163.2-201ENST00000460606 BIVM-ERCC5R4GMW8 1640 aa27.78■■■□□ 2.04
AC009163.2-201ENST00000460606 FAM9AQ8IZU1 332 aaPredicted RBP27.78■■■□□ 2.04
AC009163.2-201ENST00000460606 MRC2Q9UBG0 1479 aa27.78■■■□□ 2.04
AC009163.2-201ENST00000460606 DNMBPQ6XZF7 1577 aa27.77■■■□□ 2.04
AC009163.2-201ENST00000460606 FGD5Q6ZNL6 1462 aa27.73■■■□□ 2.03
AC009163.2-201ENST00000460606 THOC2Q8NI27 1593 aaKnown RBP27.67■■■□□ 2.02
AC009163.2-201ENST00000460606 HRCP23327 699 aa27.67■■■□□ 2.02
AC009163.2-201ENST00000460606 SOGA1O94964 1423 aa27.66■■■□□ 2.02
AC009163.2-201ENST00000460606 POLA1P09884 1462 aaPredicted RBP27.66■■■□□ 2.02
AC009163.2-201ENST00000460606 RAD54L2Q9Y4B4 1467 aa27.64■■■□□ 2.02
AC009163.2-201ENST00000460606 WDR62O43379 1518 aa27.62■■■□□ 2.01
AC009163.2-201ENST00000460606 RUSC2Q8N2Y8 1516 aa27.62■■■□□ 2.01
AC009163.2-201ENST00000460606 EHMT2Q96KQ7 1210 aa27.54■■■□□ 2
AC009163.2-201ENST00000460606 CUX2O14529 1486 aa27.5■■□□□ 1.99
AC009163.2-201ENST00000460606 TDRD9Q8NDG6 1382 aaKnown RBP27.43■■□□□ 1.98
AC009163.2-201ENST00000460606 TARBP1Q13395 1621 aaKnown RBP27.39■■□□□ 1.98
AC009163.2-201ENST00000460606 LOC105371045A0A1W2PR82 267 aa27.39■■□□□ 1.98
AC009163.2-201ENST00000460606 ABCA10Q8WWZ4 1543 aa27.39■■□□□ 1.98
AC009163.2-201ENST00000460606 KIF27Q86VH2 1401 aa27.38■■□□□ 1.97
AC009163.2-201ENST00000460606 ZNF608Q9ULD9 1512 aaPredicted RBP27.35■■□□□ 1.97
AC009163.2-201ENST00000460606 CSRNP3Q8WYN3 585 aa27.35■■□□□ 1.97
AC009163.2-201ENST00000460606 IFT140Q96RY7 1462 aa27.34■■□□□ 1.97
AC009163.2-201ENST00000460606 AQRO60306 1485 aaKnown RBP eCLIP27.32■■□□□ 1.96
AC009163.2-201ENST00000460606 WDR97A6NE52 1622 aa27.32■■□□□ 1.96
AC009163.2-201ENST00000460606 PCGF6Q9BYE7 350 aa27.29■■□□□ 1.96
AC009163.2-201ENST00000460606 EEA1Q15075 1411 aa27.29■■□□□ 1.96
AC009163.2-201ENST00000460606 GAPVD1Q14C86 1478 aa27.24■■□□□ 1.95
AC009163.2-201ENST00000460606 IGF1RP08069 1367 aa27.23■■□□□ 1.95
AC009163.2-201ENST00000460606 ABCA5Q8WWZ7 1642 aa27.21■■□□□ 1.95
AC009163.2-201ENST00000460606 EIF4G3O43432 1585 aaKnown RBP27.16■■□□□ 1.94
AC009163.2-201ENST00000460606 RAPGEF2Q9Y4G8 1499 aa27.1■■□□□ 1.93
AC009163.2-201ENST00000460606 CARMIL1Q5VZK9 1371 aa27.08■■□□□ 1.93
AC009163.2-201ENST00000460606 PBRM1Q86U86 1689 aa27.07■■□□□ 1.92
AC009163.2-201ENST00000460606 GRIN2BQ13224 1484 aa27.06■■□□□ 1.92
AC009163.2-201ENST00000460606 PRXQ9BXM0 1461 aa27.06■■□□□ 1.92
AC009163.2-201ENST00000460606 UBTFP17480 764 aaKnown RBP27.05■■□□□ 1.92
AC009163.2-201ENST00000460606 ERICH3Q5RHP9 1530 aa27.04■■□□□ 1.92
AC009163.2-201ENST00000460606 SNAPC4Q5SXM2 1469 aa27.01■■□□□ 1.91
AC009163.2-201ENST00000460606 KIF21BO75037 1637 aa27■■□□□ 1.91
AC009163.2-201ENST00000460606 GOLGA3Q08378 1498 aa27■■□□□ 1.91
AC009163.2-201ENST00000460606 FBLN2P98095 1184 aa26.96■■□□□ 1.91
AC009163.2-201ENST00000460606 RANGAP1P46060 587 aaPredicted RBP26.95■■□□□ 1.9
AC009163.2-201ENST00000460606 CUL7Q14999 1698 aa26.94■■□□□ 1.9
AC009163.2-201ENST00000460606 ADAMTS12P58397 1594 aa26.9■■□□□ 1.9
AC009163.2-201ENST00000460606 PPARGC1BQ86YN6 1023 aaKnown RBP26.9■■□□□ 1.9
AC009163.2-201ENST00000460606 FHAD1B1AJZ9 1412 aa26.9■■□□□ 1.9
AC009163.2-201ENST00000460606 CHMP7Q8WUX9 453 aaPredicted RBP26.86■■□□□ 1.89
AC009163.2-201ENST00000460606 MAGI1Q96QZ7 1491 aaPredicted RBP26.85■■□□□ 1.89
AC009163.2-201ENST00000460606 TNIKQ9UKE5 1360 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms