RNA–Protein interactions for RNA: ENST00000460606.1

AC009163.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC009163.2, Length 2,125 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009163.2-201ENST00000460606 NISCHQ9Y2I1 1504 aa38.6■■■■□ 3.77
AC009163.2-201ENST00000460606 CCDC180Q9P1Z9 1646 aa33.74■■■□□ 2.99
AC009163.2-201ENST00000460606 ABCC9O60706 1549 aa32.62■■■□□ 2.81
AC009163.2-201ENST00000460606 DCAF8L2P0C7V8 631 aa32.34■■■□□ 2.77
AC009163.2-201ENST00000460606 ZCCHC6Q5VYS8 1495 aaKnown RBP32.31■■■□□ 2.76
AC009163.2-201ENST00000460606 DCAF1Q9Y4B6 1507 aa31.76■■■□□ 2.67
AC009163.2-201ENST00000460606 NACADO15069 1562 aa31.58■■■□□ 2.65
AC009163.2-201ENST00000460606 MYO15BQ96JP2 1530 aa31.52■■■□□ 2.64
AC009163.2-201ENST00000460606 SHROOM4Q9ULL8 1493 aa31.46■■■□□ 2.63
AC009163.2-201ENST00000460606 RB1CC1Q8TDY2 1594 aa31.46■■■□□ 2.63
AC009163.2-201ENST00000460606 SCRIBQ14160 1630 aa31.2■■■□□ 2.59
AC009163.2-201ENST00000460606 UNC13AQ9UPW8 1703 aa30.85■■■□□ 2.53
AC009163.2-201ENST00000460606 PABPN1Q86U42 306 aaKnown RBP eCLIP30.76■■■□□ 2.51
AC009163.2-201ENST00000460606 BICRAQ9NZM4 1560 aa30.58■■■□□ 2.49
AC009163.2-201ENST00000460606 CECR2Q9BXF3 1484 aa30.15■■■□□ 2.42
AC009163.2-201ENST00000460606 SUPT5HO00267 1087 aaKnown RBP30.01■■■□□ 2.39
AC009163.2-201ENST00000460606 MROH2BQ7Z745 1585 aa29.88■■■□□ 2.37
AC009163.2-201ENST00000460606 RSF1Q96T23 1441 aaPredicted RBP29.82■■■□□ 2.36
AC009163.2-201ENST00000460606 BAZ1AQ9NRL2 1556 aaPredicted RBP29.81■■■□□ 2.36
AC009163.2-201ENST00000460606 SMARCA4P51532 1647 aa29.77■■■□□ 2.36
AC009163.2-201ENST00000460606 EIF4G1Q04637 1599 aaKnown RBP29.71■■■□□ 2.35
AC009163.2-201ENST00000460606 WIZO95785 1651 aa29.62■■■□□ 2.33
AC009163.2-201ENST00000460606 ATAD2BQ9ULI0 1458 aa29.42■■■□□ 2.3
AC009163.2-201ENST00000460606 CC2D2AQ9P2K1 1620 aa29.4■■■□□ 2.3
AC009163.2-201ENST00000460606 PEG3Q9GZU2 1588 aa29.33■■■□□ 2.29
AC009163.2-201ENST00000460606 SMARCA2P51531 1590 aa29.32■■■□□ 2.28
AC009163.2-201ENST00000460606 DNAJC5BQ9UF47 199 aa29.27■■■□□ 2.28
AC009163.2-201ENST00000460606 BAZ1BQ9UIG0 1483 aaKnown RBP29.25■■■□□ 2.27
AC009163.2-201ENST00000460606 TOP2AP11388 1531 aaKnown RBP29.2■■■□□ 2.26
AC009163.2-201ENST00000460606 NCAPD3P42695 1498 aa29.18■■■□□ 2.26
AC009163.2-201ENST00000460606 HMGXB3Q12766 1538 aa29.07■■■□□ 2.24
AC009163.2-201ENST00000460606 CCDC88BA6NC98 1476 aa28.97■■■□□ 2.23
AC009163.2-201ENST00000460606 NESP48681 1621 aa28.5■■■□□ 2.15
AC009163.2-201ENST00000460606 CADPSQ9ULU8 1353 aa28.47■■■□□ 2.15
AC009163.2-201ENST00000460606 CFTRP13569 1480 aa28.44■■■□□ 2.14
AC009163.2-201ENST00000460606 CHIC1Q5VXU3 224 aa28.36■■■□□ 2.13
AC009163.2-201ENST00000460606 ABCC8Q09428 1581 aa28.29■■■□□ 2.12
AC009163.2-201ENST00000460606 LAMC3Q9Y6N6 1575 aa28.25■■■□□ 2.11
AC009163.2-201ENST00000460606 FANCD2Q9BXW9 1451 aa28.18■■■□□ 2.1
AC009163.2-201ENST00000460606 PRDM2Q13029 1718 aa28.16■■■□□ 2.1
AC009163.2-201ENST00000460606 TRIM41Q8WV44 630 aa28.14■■■□□ 2.1
AC009163.2-201ENST00000460606 PDS5BQ9NTI5 1447 aa28.1■■■□□ 2.09
AC009163.2-201ENST00000460606 WRNQ14191 1432 aaPredicted RBP eCLIP28.08■■■□□ 2.09
AC009163.2-201ENST00000460606 KIF21AQ7Z4S6 1674 aa28.05■■■□□ 2.08
AC009163.2-201ENST00000460606 CEP164Q9UPV0 1460 aa28.03■■■□□ 2.08
AC009163.2-201ENST00000460606 SYNJ1O43426 1573 aa28■■■□□ 2.07
AC009163.2-201ENST00000460606 ERCC6Q03468 1493 aa27.97■■■□□ 2.07
AC009163.2-201ENST00000460606 CUX1P39880 1505 aa27.95■■■□□ 2.07
AC009163.2-201ENST00000460606 URB2Q14146 1524 aaKnown RBP27.87■■■□□ 2.05
AC009163.2-201ENST00000460606 TOP2BQ02880 1626 aa27.84■■■□□ 2.05
AC009163.2-201ENST00000460606 TOPBP1Q92547 1522 aa27.81■■■□□ 2.04
AC009163.2-201ENST00000460606 BIVM-ERCC5R4GMW8 1640 aa27.78■■■□□ 2.04
AC009163.2-201ENST00000460606 FAM9AQ8IZU1 332 aaPredicted RBP27.78■■■□□ 2.04
AC009163.2-201ENST00000460606 MRC2Q9UBG0 1479 aa27.78■■■□□ 2.04
AC009163.2-201ENST00000460606 DNMBPQ6XZF7 1577 aa27.77■■■□□ 2.04
AC009163.2-201ENST00000460606 FGD5Q6ZNL6 1462 aa27.73■■■□□ 2.03
AC009163.2-201ENST00000460606 THOC2Q8NI27 1593 aaKnown RBP27.67■■■□□ 2.02
AC009163.2-201ENST00000460606 HRCP23327 699 aa27.67■■■□□ 2.02
AC009163.2-201ENST00000460606 SOGA1O94964 1423 aa27.66■■■□□ 2.02
AC009163.2-201ENST00000460606 POLA1P09884 1462 aaPredicted RBP27.66■■■□□ 2.02
AC009163.2-201ENST00000460606 RAD54L2Q9Y4B4 1467 aa27.64■■■□□ 2.02
AC009163.2-201ENST00000460606 WDR62O43379 1518 aa27.62■■■□□ 2.01
AC009163.2-201ENST00000460606 RUSC2Q8N2Y8 1516 aa27.62■■■□□ 2.01
AC009163.2-201ENST00000460606 EHMT2Q96KQ7 1210 aa27.54■■■□□ 2
AC009163.2-201ENST00000460606 CUX2O14529 1486 aa27.5■■□□□ 1.99
AC009163.2-201ENST00000460606 TDRD9Q8NDG6 1382 aaKnown RBP27.43■■□□□ 1.98
AC009163.2-201ENST00000460606 TARBP1Q13395 1621 aaKnown RBP27.39■■□□□ 1.98
AC009163.2-201ENST00000460606 LOC105371045A0A1W2PR82 267 aa27.39■■□□□ 1.98
AC009163.2-201ENST00000460606 ABCA10Q8WWZ4 1543 aa27.39■■□□□ 1.98
AC009163.2-201ENST00000460606 KIF27Q86VH2 1401 aa27.38■■□□□ 1.97
AC009163.2-201ENST00000460606 ZNF608Q9ULD9 1512 aaPredicted RBP27.35■■□□□ 1.97
AC009163.2-201ENST00000460606 CSRNP3Q8WYN3 585 aa27.35■■□□□ 1.97
AC009163.2-201ENST00000460606 IFT140Q96RY7 1462 aa27.34■■□□□ 1.97
AC009163.2-201ENST00000460606 AQRO60306 1485 aaKnown RBP eCLIP27.32■■□□□ 1.96
AC009163.2-201ENST00000460606 WDR97A6NE52 1622 aa27.32■■□□□ 1.96
AC009163.2-201ENST00000460606 PCGF6Q9BYE7 350 aa27.29■■□□□ 1.96
AC009163.2-201ENST00000460606 EEA1Q15075 1411 aa27.29■■□□□ 1.96
AC009163.2-201ENST00000460606 GAPVD1Q14C86 1478 aa27.24■■□□□ 1.95
AC009163.2-201ENST00000460606 IGF1RP08069 1367 aa27.23■■□□□ 1.95
AC009163.2-201ENST00000460606 ABCA5Q8WWZ7 1642 aa27.21■■□□□ 1.95
AC009163.2-201ENST00000460606 EIF4G3O43432 1585 aaKnown RBP27.16■■□□□ 1.94
AC009163.2-201ENST00000460606 RAPGEF2Q9Y4G8 1499 aa27.1■■□□□ 1.93
AC009163.2-201ENST00000460606 CARMIL1Q5VZK9 1371 aa27.08■■□□□ 1.93
AC009163.2-201ENST00000460606 PBRM1Q86U86 1689 aa27.07■■□□□ 1.92
AC009163.2-201ENST00000460606 GRIN2BQ13224 1484 aa27.06■■□□□ 1.92
AC009163.2-201ENST00000460606 PRXQ9BXM0 1461 aa27.06■■□□□ 1.92
AC009163.2-201ENST00000460606 UBTFP17480 764 aaKnown RBP27.05■■□□□ 1.92
AC009163.2-201ENST00000460606 ERICH3Q5RHP9 1530 aa27.04■■□□□ 1.92
AC009163.2-201ENST00000460606 SNAPC4Q5SXM2 1469 aa27.01■■□□□ 1.91
AC009163.2-201ENST00000460606 KIF21BO75037 1637 aa27■■□□□ 1.91
AC009163.2-201ENST00000460606 GOLGA3Q08378 1498 aa27■■□□□ 1.91
AC009163.2-201ENST00000460606 FBLN2P98095 1184 aa26.96■■□□□ 1.91
AC009163.2-201ENST00000460606 RANGAP1P46060 587 aaPredicted RBP26.95■■□□□ 1.9
AC009163.2-201ENST00000460606 CUL7Q14999 1698 aa26.94■■□□□ 1.9
AC009163.2-201ENST00000460606 ADAMTS12P58397 1594 aa26.9■■□□□ 1.9
AC009163.2-201ENST00000460606 PPARGC1BQ86YN6 1023 aaKnown RBP26.9■■□□□ 1.9
AC009163.2-201ENST00000460606 FHAD1B1AJZ9 1412 aa26.9■■□□□ 1.9
AC009163.2-201ENST00000460606 CHMP7Q8WUX9 453 aaPredicted RBP26.86■■□□□ 1.89
AC009163.2-201ENST00000460606 MAGI1Q96QZ7 1491 aaPredicted RBP26.85■■□□□ 1.89
AC009163.2-201ENST00000460606 TNIKQ9UKE5 1360 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms