RNA–Protein interactions for RNA: ENST00000209718.7

KRT23-201, Transcript of keratin 23, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT23, Length 1,987 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT23-201ENST00000209718 NISCHQ9Y2I1 1504 aa31.64■■■□□ 2.66
KRT23-201ENST00000209718 HRCP23327 699 aa28.33■■■□□ 2.13
KRT23-201ENST00000209718 PELP1Q8IZL8 1130 aaKnown RBP28.08■■■□□ 2.09
KRT23-201ENST00000209718 PCGF6Q9BYE7 350 aa27.31■■□□□ 1.96
KRT23-201ENST00000209718 PPARGC1BQ86YN6 1023 aaKnown RBP27.26■■□□□ 1.95
KRT23-201ENST00000209718 MYO15BQ96JP2 1530 aa27.23■■□□□ 1.95
KRT23-201ENST00000209718 MYT1Q01538 1121 aa27.22■■□□□ 1.95
KRT23-201ENST00000209718 DCAF1Q9Y4B6 1507 aa27.19■■□□□ 1.94
KRT23-201ENST00000209718 SUPT5HO00267 1087 aaKnown RBP27.11■■□□□ 1.93
KRT23-201ENST00000209718 CHIC1Q5VXU3 224 aa27.07■■□□□ 1.92
KRT23-201ENST00000209718 SHROOM4Q9ULL8 1493 aa27.05■■□□□ 1.92
KRT23-201ENST00000209718 ZCCHC6Q5VYS8 1495 aaKnown RBP26.91■■□□□ 1.9
KRT23-201ENST00000209718 CCDC180Q9P1Z9 1646 aa26.9■■□□□ 1.9
KRT23-201ENST00000209718 ZEB1P37275 1124 aaPredicted RBP26.83■■□□□ 1.89
KRT23-201ENST00000209718 SCAF1Q9H7N4 1312 aaKnown RBP26.74■■□□□ 1.87
KRT23-201ENST00000209718 TRIM26Q12899 539 aaPredicted RBP26.73■■□□□ 1.87
KRT23-201ENST00000209718 ACIN1Q9UKV3 1341 aaKnown RBP26.18■■□□□ 1.78
KRT23-201ENST00000209718 LOC105371045A0A1W2PR82 267 aa26.15■■□□□ 1.78
KRT23-201ENST00000209718 CENPBP07199 599 aaPredicted RBP25.94■■□□□ 1.74
KRT23-201ENST00000209718 NEUROD1Q13562 356 aa25.91■■□□□ 1.74
KRT23-201ENST00000209718 GTF3C3Q9Y5Q9 886 aa25.81■■□□□ 1.72
KRT23-201ENST00000209718 TTBK1Q5TCY1 1321 aaPredicted RBP25.7■■□□□ 1.7
KRT23-201ENST00000209718 DCAF8L2P0C7V8 631 aa25.58■■□□□ 1.69
KRT23-201ENST00000209718 DIEXFQ68CQ4 756 aaKnown RBP25.53■■□□□ 1.68
KRT23-201ENST00000209718 ABCC9O60706 1549 aa25.5■■□□□ 1.67
KRT23-201ENST00000209718 CCER1Q8TC90 406 aaPredicted RBP25.33■■□□□ 1.64
KRT23-201ENST00000209718 TRIM41Q8WV44 630 aa25.28■■□□□ 1.64
KRT23-201ENST00000209718 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.2■■□□□ 1.62
KRT23-201ENST00000209718 RSF1Q96T23 1441 aaPredicted RBP25.14■■□□□ 1.61
KRT23-201ENST00000209718 CLSPNQ9HAW4 1339 aa25.12■■□□□ 1.61
KRT23-201ENST00000209718 ZNF316A6NFI3 1004 aaPredicted RBP25.09■■□□□ 1.61
KRT23-201ENST00000209718 RB1CC1Q8TDY2 1594 aa25.06■■□□□ 1.6
KRT23-201ENST00000209718 SCRIBQ14160 1630 aa24.96■■□□□ 1.59
KRT23-201ENST00000209718 FAM9AQ8IZU1 332 aaPredicted RBP24.94■■□□□ 1.58
KRT23-201ENST00000209718 WRNQ14191 1432 aaPredicted RBP eCLIP24.91■■□□□ 1.58
KRT23-201ENST00000209718 ANP32EQ9BTT0 268 aa24.86■■□□□ 1.57
KRT23-201ENST00000209718 BCL11AQ9H165 835 aa24.85■■□□□ 1.57
KRT23-201ENST00000209718 YTHDC1Q96MU7 727 aaKnown RBP24.81■■□□□ 1.56
KRT23-201ENST00000209718 MIER1Q8N108 512 aa24.75■■□□□ 1.55
KRT23-201ENST00000209718 NACADO15069 1562 aa24.67■■□□□ 1.54
KRT23-201ENST00000209718 SUPT16HQ9Y5B9 1047 aaKnown RBP24.62■■□□□ 1.53
KRT23-201ENST00000209718 TSHZ2Q9NRE2 1034 aa24.57■■□□□ 1.52
KRT23-201ENST00000209718 EHMT2Q96KQ7 1210 aa24.55■■□□□ 1.52
KRT23-201ENST00000209718 MROH2BQ7Z745 1585 aa24.53■■□□□ 1.52
KRT23-201ENST00000209718 CECR2Q9BXF3 1484 aa24.49■■□□□ 1.51
KRT23-201ENST00000209718 EIF4G1Q04637 1599 aaKnown RBP24.48■■□□□ 1.51
KRT23-201ENST00000209718 BAZ1AQ9NRL2 1556 aaPredicted RBP24.47■■□□□ 1.51
KRT23-201ENST00000209718 CEP162Q5TB80 1403 aa24.46■■□□□ 1.51
KRT23-201ENST00000209718 TNIKQ9UKE5 1360 aa24.42■■□□□ 1.5
KRT23-201ENST00000209718 WIZO95785 1651 aa24.4■■□□□ 1.5
KRT23-201ENST00000209718 CSRNP3Q8WYN3 585 aa24.38■■□□□ 1.49
KRT23-201ENST00000209718 EEA1Q15075 1411 aa24.28■■□□□ 1.48
KRT23-201ENST00000209718 TOP2AP11388 1531 aaKnown RBP24.19■■□□□ 1.46
KRT23-201ENST00000209718 GOLGA3Q08378 1498 aa24.06■■□□□ 1.44
KRT23-201ENST00000209718 CCDC88BA6NC98 1476 aa24.03■■□□□ 1.44
KRT23-201ENST00000209718 SMARCA4P51532 1647 aa24.02■■□□□ 1.44
KRT23-201ENST00000209718 SMARCA2P51531 1590 aa24.01■■□□□ 1.43
KRT23-201ENST00000209718 HNRNPUL2Q1KMD3 747 aaKnown RBP23.99■■□□□ 1.43
KRT23-201ENST00000209718 ABCC8Q09428 1581 aa23.97■■□□□ 1.43
KRT23-201ENST00000209718 MYT1LQ9UL68 1186 aa23.97■■□□□ 1.43
KRT23-201ENST00000209718 RBM19Q9Y4C8 960 aaKnown RBP23.96■■□□□ 1.43
KRT23-201ENST00000209718 PRKCSHP14314 528 aaPredicted RBP23.95■■□□□ 1.42
KRT23-201ENST00000209718 SOGA1O94964 1423 aa23.92■■□□□ 1.42
KRT23-201ENST00000209718 ERICH6Q7L0X2 663 aa23.89■■□□□ 1.42
KRT23-201ENST00000209718 DHX57Q6P158 1386 aaKnown RBP23.89■■□□□ 1.42
KRT23-201ENST00000209718 UBTFP17480 764 aaKnown RBP23.88■■□□□ 1.41
KRT23-201ENST00000209718 VPS8Q8N3P4 1428 aa23.87■■□□□ 1.41
KRT23-201ENST00000209718 KIF21BO75037 1637 aa23.84■■□□□ 1.41
KRT23-201ENST00000209718 FANCIQ9NVI1 1328 aa23.82■■□□□ 1.4
KRT23-201ENST00000209718 FKBP8Q14318 412 aa23.82■■□□□ 1.4
KRT23-201ENST00000209718 CEP164Q9UPV0 1460 aa23.82■■□□□ 1.4
KRT23-201ENST00000209718 NEFLP07196 543 aa23.82■■□□□ 1.4
KRT23-201ENST00000209718 CLIP1P30622 1438 aa23.76■■□□□ 1.39
KRT23-201ENST00000209718 BAZ1BQ9UIG0 1483 aaKnown RBP23.74■■□□□ 1.39
KRT23-201ENST00000209718 BCANQ96GW7 911 aa23.73■■□□□ 1.39
KRT23-201ENST00000209718 APLP2Q06481 763 aa23.72■■□□□ 1.39
KRT23-201ENST00000209718 UNC13AQ9UPW8 1703 aa23.72■■□□□ 1.39
KRT23-201ENST00000209718 RUSC2Q8N2Y8 1516 aa23.7■■□□□ 1.38
KRT23-201ENST00000209718 MSH5O43196 834 aa23.69■■□□□ 1.38
KRT23-201ENST00000209718 CUX2O14529 1486 aa23.69■■□□□ 1.38
KRT23-201ENST00000209718 PEG3Q9GZU2 1588 aa23.66■■□□□ 1.38
KRT23-201ENST00000209718 CCER2I3L3R5 266 aa23.56■■□□□ 1.36
KRT23-201ENST00000209718 KCNH8Q96L42 1107 aa23.54■■□□□ 1.36
KRT23-201ENST00000209718 RRBP1Q9P2E9 1410 aaKnown RBP23.53■■□□□ 1.36
KRT23-201ENST00000209718 CDK11AQ9UQ88 783 aaPredicted RBP23.49■■□□□ 1.35
KRT23-201ENST00000209718 SYNJ1O43426 1573 aa23.48■■□□□ 1.35
KRT23-201ENST00000209718 ERICH6BQ5W0A0 696 aa23.46■■□□□ 1.35
KRT23-201ENST00000209718 DEKP35659 375 aaKnown RBP23.43■■□□□ 1.34
KRT23-201ENST00000209718 BICRAQ9NZM4 1560 aa23.4■■□□□ 1.34
KRT23-201ENST00000209718 ITGAEP38570 1179 aa23.4■■□□□ 1.34
KRT23-201ENST00000209718 PPP1R15AO75807 674 aaPredicted RBP23.37■■□□□ 1.33
KRT23-201ENST00000209718 MAPKBP1O60336 1514 aa23.34■■□□□ 1.33
KRT23-201ENST00000209718 TIMELESSQ9UNS1 1208 aa23.34■■□□□ 1.33
KRT23-201ENST00000209718 RAPGEF2Q9Y4G8 1499 aa23.33■■□□□ 1.32
KRT23-201ENST00000209718 ANP32CO43423 234 aa23.31■■□□□ 1.32
KRT23-201ENST00000209718 DDX10Q13206 875 aaKnown RBP23.3■■□□□ 1.32
KRT23-201ENST00000209718 CCNB3Q8WWL7 1395 aa23.28■■□□□ 1.32
KRT23-201ENST00000209718 ERICH3Q5RHP9 1530 aa23.27■■□□□ 1.32
KRT23-201ENST00000209718 TOP2BQ02880 1626 aa23.25■■□□□ 1.31
KRT23-201ENST00000209718 ARAP1Q96P48 1450 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms