RNA–Protein interactions for RNA: ENST00000357922.8

ASIC3-203, Transcript of acid sensing ion channel subunit 3, humanhuman

TSL 1 (best) BASIC

Gene ASIC3, Length 2,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC3-203ENST00000357922 NISCHQ9Y2I1 1504 aa36.79■■■■□ 3.48
ASIC3-203ENST00000357922 CCDC180Q9P1Z9 1646 aa31.73■■■□□ 2.67
ASIC3-203ENST00000357922 ZCCHC6Q5VYS8 1495 aaKnown RBP31.05■■■□□ 2.56
ASIC3-203ENST00000357922 SHROOM4Q9ULL8 1493 aa30.94■■■□□ 2.54
ASIC3-203ENST00000357922 DCAF8L2P0C7V8 631 aa30.46■■■□□ 2.47
ASIC3-203ENST00000357922 ABCC9O60706 1549 aa30.44■■■□□ 2.46
ASIC3-203ENST00000357922 DCAF1Q9Y4B6 1507 aa30.24■■■□□ 2.43
ASIC3-203ENST00000357922 SUPT5HO00267 1087 aaKnown RBP30.14■■■□□ 2.41
ASIC3-203ENST00000357922 MYO15BQ96JP2 1530 aa29.68■■■□□ 2.34
ASIC3-203ENST00000357922 NACADO15069 1562 aa29.64■■■□□ 2.34
ASIC3-203ENST00000357922 RB1CC1Q8TDY2 1594 aa29.46■■■□□ 2.31
ASIC3-203ENST00000357922 SCRIBQ14160 1630 aa29.4■■■□□ 2.3
ASIC3-203ENST00000357922 CHIC1Q5VXU3 224 aa29.17■■■□□ 2.26
ASIC3-203ENST00000357922 RSF1Q96T23 1441 aaPredicted RBP28.93■■■□□ 2.22
ASIC3-203ENST00000357922 UNC13AQ9UPW8 1703 aa28.92■■■□□ 2.22
ASIC3-203ENST00000357922 PABPN1Q86U42 306 aaKnown RBP eCLIP28.77■■■□□ 2.2
ASIC3-203ENST00000357922 CECR2Q9BXF3 1484 aa28.69■■■□□ 2.18
ASIC3-203ENST00000357922 BICRAQ9NZM4 1560 aa28.65■■■□□ 2.18
ASIC3-203ENST00000357922 MROH2BQ7Z745 1585 aa28.57■■■□□ 2.16
ASIC3-203ENST00000357922 WIZO95785 1651 aa28.41■■■□□ 2.14
ASIC3-203ENST00000357922 BAZ1AQ9NRL2 1556 aaPredicted RBP28.28■■■□□ 2.12
ASIC3-203ENST00000357922 LOC105371045A0A1W2PR82 267 aa28.26■■■□□ 2.11
ASIC3-203ENST00000357922 TRIM41Q8WV44 630 aa28.13■■■□□ 2.09
ASIC3-203ENST00000357922 SMARCA4P51532 1647 aa28.12■■■□□ 2.09
ASIC3-203ENST00000357922 TOP2AP11388 1531 aaKnown RBP27.97■■■□□ 2.07
ASIC3-203ENST00000357922 EIF4G1Q04637 1599 aaKnown RBP27.89■■■□□ 2.06
ASIC3-203ENST00000357922 FAM9AQ8IZU1 332 aaPredicted RBP27.84■■■□□ 2.05
ASIC3-203ENST00000357922 CCDC88BA6NC98 1476 aa27.82■■■□□ 2.04
ASIC3-203ENST00000357922 SMARCA2P51531 1590 aa27.81■■■□□ 2.04
ASIC3-203ENST00000357922 PCGF6Q9BYE7 350 aa27.78■■■□□ 2.04
ASIC3-203ENST00000357922 ATAD2BQ9ULI0 1458 aa27.67■■■□□ 2.02
ASIC3-203ENST00000357922 PEG3Q9GZU2 1588 aa27.63■■■□□ 2.01
ASIC3-203ENST00000357922 ABCC8Q09428 1581 aa27.59■■■□□ 2.01
ASIC3-203ENST00000357922 EHMT2Q96KQ7 1210 aa27.58■■■□□ 2.01
ASIC3-203ENST00000357922 HRCP23327 699 aa27.53■■■□□ 2
ASIC3-203ENST00000357922 BAZ1BQ9UIG0 1483 aaKnown RBP27.51■■□□□ 1.99
ASIC3-203ENST00000357922 CC2D2AQ9P2K1 1620 aa27.45■■□□□ 1.99
ASIC3-203ENST00000357922 NCAPD3P42695 1498 aa27.41■■□□□ 1.98
ASIC3-203ENST00000357922 TRIM26Q12899 539 aaPredicted RBP27.39■■□□□ 1.98
ASIC3-203ENST00000357922 HMGXB3Q12766 1538 aa27.31■■□□□ 1.96
ASIC3-203ENST00000357922 SOGA1O94964 1423 aa27.24■■□□□ 1.95
ASIC3-203ENST00000357922 WRNQ14191 1432 aaPredicted RBP eCLIP27.17■■□□□ 1.94
ASIC3-203ENST00000357922 RUSC2Q8N2Y8 1516 aa27.14■■□□□ 1.94
ASIC3-203ENST00000357922 DNAJC5BQ9UF47 199 aa27.1■■□□□ 1.93
ASIC3-203ENST00000357922 SYNJ1O43426 1573 aa27.1■■□□□ 1.93
ASIC3-203ENST00000357922 EEA1Q15075 1411 aa27.05■■□□□ 1.92
ASIC3-203ENST00000357922 CSRNP3Q8WYN3 585 aa27.03■■□□□ 1.92
ASIC3-203ENST00000357922 PPARGC1BQ86YN6 1023 aaKnown RBP27.01■■□□□ 1.91
ASIC3-203ENST00000357922 TNIKQ9UKE5 1360 aa26.92■■□□□ 1.9
ASIC3-203ENST00000357922 CEP162Q5TB80 1403 aa26.91■■□□□ 1.9
ASIC3-203ENST00000357922 GOLGA3Q08378 1498 aa26.84■■□□□ 1.89
ASIC3-203ENST00000357922 UBTFP17480 764 aaKnown RBP26.84■■□□□ 1.89
ASIC3-203ENST00000357922 TOP2BQ02880 1626 aa26.81■■□□□ 1.88
ASIC3-203ENST00000357922 CFTRP13569 1480 aa26.78■■□□□ 1.88
ASIC3-203ENST00000357922 BIVM-ERCC5R4GMW8 1640 aa26.75■■□□□ 1.87
ASIC3-203ENST00000357922 CADPSQ9ULU8 1353 aa26.74■■□□□ 1.87
ASIC3-203ENST00000357922 KIF21BO75037 1637 aa26.74■■□□□ 1.87
ASIC3-203ENST00000357922 CEP164Q9UPV0 1460 aa26.73■■□□□ 1.87
ASIC3-203ENST00000357922 NESP48681 1621 aa26.69■■□□□ 1.86
ASIC3-203ENST00000357922 CUX1P39880 1505 aa26.63■■□□□ 1.85
ASIC3-203ENST00000357922 RAPGEF2Q9Y4G8 1499 aa26.6■■□□□ 1.85
ASIC3-203ENST00000357922 TTBK1Q5TCY1 1321 aaPredicted RBP26.58■■□□□ 1.85
ASIC3-203ENST00000357922 ZEB1P37275 1124 aaPredicted RBP26.58■■□□□ 1.85
ASIC3-203ENST00000357922 PRDM2Q13029 1718 aa26.52■■□□□ 1.84
ASIC3-203ENST00000357922 CLIP1P30622 1438 aa26.5■■□□□ 1.83
ASIC3-203ENST00000357922 LAMC3Q9Y6N6 1575 aa26.47■■□□□ 1.83
ASIC3-203ENST00000357922 FANCD2Q9BXW9 1451 aa26.47■■□□□ 1.83
ASIC3-203ENST00000357922 PRXQ9BXM0 1461 aa26.42■■□□□ 1.82
ASIC3-203ENST00000357922 ERICH3Q5RHP9 1530 aa26.38■■□□□ 1.81
ASIC3-203ENST00000357922 RANGAP1P46060 587 aaPredicted RBP26.37■■□□□ 1.81
ASIC3-203ENST00000357922 KIF27Q86VH2 1401 aa26.37■■□□□ 1.81
ASIC3-203ENST00000357922 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.36■■□□□ 1.81
ASIC3-203ENST00000357922 VPS8Q8N3P4 1428 aa26.34■■□□□ 1.81
ASIC3-203ENST00000357922 PDS5BQ9NTI5 1447 aa26.32■■□□□ 1.8
ASIC3-203ENST00000357922 KIF21AQ7Z4S6 1674 aa26.26■■□□□ 1.79
ASIC3-203ENST00000357922 CCER1Q8TC90 406 aaPredicted RBP26.24■■□□□ 1.79
ASIC3-203ENST00000357922 CUX2O14529 1486 aa26.2■■□□□ 1.79
ASIC3-203ENST00000357922 FGD5Q6ZNL6 1462 aa26.2■■□□□ 1.78
ASIC3-203ENST00000357922 ARAP1Q96P48 1450 aa26.17■■□□□ 1.78
ASIC3-203ENST00000357922 URB2Q14146 1524 aaKnown RBP26.17■■□□□ 1.78
ASIC3-203ENST00000357922 TOPBP1Q92547 1522 aa26.15■■□□□ 1.78
ASIC3-203ENST00000357922 IGF1RP08069 1367 aa26.14■■□□□ 1.77
ASIC3-203ENST00000357922 DNMBPQ6XZF7 1577 aa26.13■■□□□ 1.77
ASIC3-203ENST00000357922 APLP2Q06481 763 aa26.12■■□□□ 1.77
ASIC3-203ENST00000357922 ERCC6Q03468 1493 aa26.06■■□□□ 1.76
ASIC3-203ENST00000357922 POLA1P09884 1462 aaPredicted RBP26.03■■□□□ 1.76
ASIC3-203ENST00000357922 RAD54L2Q9Y4B4 1467 aa26.02■■□□□ 1.76
ASIC3-203ENST00000357922 ARHGAP35Q9NRY4 1499 aa26■■□□□ 1.75
ASIC3-203ENST00000357922 MRC2Q9UBG0 1479 aa26■■□□□ 1.75
ASIC3-203ENST00000357922 CARMIL1Q5VZK9 1371 aa26■■□□□ 1.75
ASIC3-203ENST00000357922 HNRNPUL2Q1KMD3 747 aaKnown RBP25.99■■□□□ 1.75
ASIC3-203ENST00000357922 KANK4Q5T7N3 995 aaPredicted RBP25.92■■□□□ 1.74
ASIC3-203ENST00000357922 ABCA10Q8WWZ4 1543 aa25.9■■□□□ 1.74
ASIC3-203ENST00000357922 WDR62O43379 1518 aa25.85■■□□□ 1.73
ASIC3-203ENST00000357922 THOC2Q8NI27 1593 aaKnown RBP25.83■■□□□ 1.73
ASIC3-203ENST00000357922 TDRD9Q8NDG6 1382 aaKnown RBP25.8■■□□□ 1.72
ASIC3-203ENST00000357922 WDR97A6NE52 1622 aa25.75■■□□□ 1.71
ASIC3-203ENST00000357922 TARBP1Q13395 1621 aaKnown RBP25.74■■□□□ 1.71
ASIC3-203ENST00000357922 CUL7Q14999 1698 aa25.71■■□□□ 1.71
ASIC3-203ENST00000357922 RRBP1Q9P2E9 1410 aaKnown RBP25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms