Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.69■□□□□ 0.26
PRAMEP78395 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.69■□□□□ 0.26
PRAMEP78395 MIR4515-201ENST00000584082 81 ntBASIC16.69■□□□□ 0.26
PRAMEP78395 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEP78395 GGT4P-201ENST00000623672 1708 ntBASIC16.69■□□□□ 0.26
PRAMEP78395 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEP78395 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.69■□□□□ 0.26
PRAMEP78395 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
PRAMEP78395 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
PRAMEP78395 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
PRAMEP78395 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEP78395 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
PRAMEP78395 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
PRAMEP78395 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEP78395 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.69■□□□□ 0.26
PRAMEP78395 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.69■□□□□ 0.26
PRAMEP78395 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEP78395 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
PRAMEP78395 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.68■□□□□ 0.26
PRAMEP78395 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.68■□□□□ 0.26
PRAMEP78395 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PRAMEP78395 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.68■□□□□ 0.26
PRAMEP78395 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PRAMEP78395 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PRAMEP78395 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.68■□□□□ 0.26
PRAMEP78395 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PRAMEP78395 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.68■□□□□ 0.26
PRAMEP78395 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PRAMEP78395 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.68■□□□□ 0.26
PRAMEP78395 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.68■□□□□ 0.26
PRAMEP78395 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PRAMEP78395 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PRAMEP78395 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PRAMEP78395 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PRAMEP78395 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.68■□□□□ 0.26
PRAMEP78395 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.68■□□□□ 0.26
PRAMEP78395 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PRAMEP78395 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.68■□□□□ 0.26
PRAMEP78395 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PRAMEP78395 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.68■□□□□ 0.26
PRAMEP78395 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
PRAMEP78395 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PRAMEP78395 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PRAMEP78395 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PRAMEP78395 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
PRAMEP78395 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PRAMEP78395 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PRAMEP78395 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PRAMEP78395 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.68■□□□□ 0.26
PRAMEP78395 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.68■□□□□ 0.26
PRAMEP78395 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
PRAMEP78395 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PRAMEP78395 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PRAMEP78395 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PRAMEP78395 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
PRAMEP78395 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.67■□□□□ 0.26
PRAMEP78395 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PRAMEP78395 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.67■□□□□ 0.26
PRAMEP78395 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRAMEP78395 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PRAMEP78395 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.67■□□□□ 0.26
PRAMEP78395 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
PRAMEP78395 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRAMEP78395 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
PRAMEP78395 GPAA1P2-202ENST00000606848 1787 ntBASIC16.67■□□□□ 0.26
PRAMEP78395 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRAMEP78395 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.67■□□□□ 0.26
PRAMEP78395 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRAMEP78395 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PRAMEP78395 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PRAMEP78395 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PRAMEP78395 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PRAMEP78395 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.67■□□□□ 0.26
PRAMEP78395 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.67■□□□□ 0.26
PRAMEP78395 AC079776.4-201ENST00000511039 504 ntBASIC16.67■□□□□ 0.26
PRAMEP78395 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.67■□□□□ 0.26
PRAMEP78395 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.67■□□□□ 0.26
PRAMEP78395 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.67■□□□□ 0.26
PRAMEP78395 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.67■□□□□ 0.26
PRAMEP78395 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRAMEP78395 Z83851.2-201ENST00000609564 659 ntBASIC16.67■□□□□ 0.26
PRAMEP78395 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRAMEP78395 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
PRAMEP78395 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRAMEP78395 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRAMEP78395 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRAMEP78395 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.67■□□□□ 0.26
PRAMEP78395 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRAMEP78395 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.67■□□□□ 0.26
PRAMEP78395 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.67■□□□□ 0.26
PRAMEP78395 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRAMEP78395 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRAMEP78395 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRAMEP78395 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.67■□□□□ 0.26
PRAMEP78395 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.67■□□□□ 0.26
PRAMEP78395 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRAMEP78395 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.67■□□□□ 0.26
PRAMEP78395 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.67■□□□□ 0.26
PRAMEP78395 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRAMEP78395 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms