RNA–Protein interactions for RNA: ENST00000296255.7

RPN1-201, Transcript of ribophorin I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPN1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-201ENST00000296255 NISCHQ9Y2I1 1504 aa34.53■■■■□ 3.12
RPN1-201ENST00000296255 SHROOM4Q9ULL8 1493 aa29.43■■■□□ 2.3
RPN1-201ENST00000296255 CCDC180Q9P1Z9 1646 aa29.33■■■□□ 2.29
RPN1-201ENST00000296255 ZCCHC6Q5VYS8 1495 aaKnown RBP29.23■■■□□ 2.27
RPN1-201ENST00000296255 SUPT5HO00267 1087 aaKnown RBP28.88■■■□□ 2.21
RPN1-201ENST00000296255 DCAF8L2P0C7V8 631 aa28.48■■■□□ 2.15
RPN1-201ENST00000296255 DCAF1Q9Y4B6 1507 aa28.34■■■□□ 2.13
RPN1-201ENST00000296255 CHIC1Q5VXU3 224 aa28.17■■■□□ 2.1
RPN1-201ENST00000296255 MYO15BQ96JP2 1530 aa28.14■■■□□ 2.09
RPN1-201ENST00000296255 ABCC9O60706 1549 aa27.6■■■□□ 2.01
RPN1-201ENST00000296255 SCRIBQ14160 1630 aa27.49■■□□□ 1.99
RPN1-201ENST00000296255 HRCP23327 699 aa27.42■■□□□ 1.98
RPN1-201ENST00000296255 RSF1Q96T23 1441 aaPredicted RBP27.35■■□□□ 1.97
RPN1-201ENST00000296255 LOC105371045A0A1W2PR82 267 aa27.33■■□□□ 1.97
RPN1-201ENST00000296255 PCGF6Q9BYE7 350 aa27.33■■□□□ 1.97
RPN1-201ENST00000296255 RB1CC1Q8TDY2 1594 aa27.09■■□□□ 1.93
RPN1-201ENST00000296255 NACADO15069 1562 aa27.08■■□□□ 1.93
RPN1-201ENST00000296255 CECR2Q9BXF3 1484 aa26.93■■□□□ 1.9
RPN1-201ENST00000296255 TRIM41Q8WV44 630 aa26.9■■□□□ 1.9
RPN1-201ENST00000296255 MROH2BQ7Z745 1585 aa26.86■■□□□ 1.89
RPN1-201ENST00000296255 PPARGC1BQ86YN6 1023 aaKnown RBP26.85■■□□□ 1.89
RPN1-201ENST00000296255 TRIM26Q12899 539 aaPredicted RBP26.81■■□□□ 1.88
RPN1-201ENST00000296255 WIZO95785 1651 aa26.72■■□□□ 1.87
RPN1-201ENST00000296255 FAM9AQ8IZU1 332 aaPredicted RBP26.67■■□□□ 1.86
RPN1-201ENST00000296255 BAZ1AQ9NRL2 1556 aaPredicted RBP26.56■■□□□ 1.84
RPN1-201ENST00000296255 EIF4G1Q04637 1599 aaKnown RBP26.45■■□□□ 1.82
RPN1-201ENST00000296255 EHMT2Q96KQ7 1210 aa26.42■■□□□ 1.82
RPN1-201ENST00000296255 TOP2AP11388 1531 aaKnown RBP26.29■■□□□ 1.8
RPN1-201ENST00000296255 SMARCA4P51532 1647 aa26.29■■□□□ 1.8
RPN1-201ENST00000296255 UNC13AQ9UPW8 1703 aa26.29■■□□□ 1.8
RPN1-201ENST00000296255 ZEB1P37275 1124 aaPredicted RBP26.23■■□□□ 1.79
RPN1-201ENST00000296255 CCDC88BA6NC98 1476 aa26.19■■□□□ 1.78
RPN1-201ENST00000296255 SMARCA2P51531 1590 aa26.17■■□□□ 1.78
RPN1-201ENST00000296255 ABCC8Q09428 1581 aa26.14■■□□□ 1.77
RPN1-201ENST00000296255 BICRAQ9NZM4 1560 aa25.95■■□□□ 1.74
RPN1-201ENST00000296255 SOGA1O94964 1423 aa25.9■■□□□ 1.74
RPN1-201ENST00000296255 PABPN1Q86U42 306 aaKnown RBP eCLIP25.88■■□□□ 1.731e-8■■□□□ 12.6
RPN1-201ENST00000296255 WRNQ14191 1432 aaPredicted RBP eCLIP25.82■■□□□ 1.72
RPN1-201ENST00000296255 CEP162Q5TB80 1403 aa25.81■■□□□ 1.72
RPN1-201ENST00000296255 PEG3Q9GZU2 1588 aa25.8■■□□□ 1.72
RPN1-201ENST00000296255 RUSC2Q8N2Y8 1516 aa25.79■■□□□ 1.72
RPN1-201ENST00000296255 TNIKQ9UKE5 1360 aa25.77■■□□□ 1.72
RPN1-201ENST00000296255 EEA1Q15075 1411 aa25.75■■□□□ 1.71
RPN1-201ENST00000296255 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.72■■□□□ 1.71
RPN1-201ENST00000296255 CSRNP3Q8WYN3 585 aa25.72■■□□□ 1.71
RPN1-201ENST00000296255 CCER1Q8TC90 406 aaPredicted RBP25.63■■□□□ 1.69
RPN1-201ENST00000296255 TTBK1Q5TCY1 1321 aaPredicted RBP25.6■■□□□ 1.69
RPN1-201ENST00000296255 UBTFP17480 764 aaKnown RBP25.59■■□□□ 1.69
RPN1-201ENST00000296255 GOLGA3Q08378 1498 aa25.59■■□□□ 1.69
RPN1-201ENST00000296255 SYNJ1O43426 1573 aa25.58■■□□□ 1.69
RPN1-201ENST00000296255 ATAD2BQ9ULI0 1458 aa25.58■■□□□ 1.69
RPN1-201ENST00000296255 BAZ1BQ9UIG0 1483 aaKnown RBP25.49■■□□□ 1.67
RPN1-201ENST00000296255 KIF21BO75037 1637 aa25.45■■□□□ 1.66
RPN1-201ENST00000296255 CEP164Q9UPV0 1460 aa25.44■■□□□ 1.66
RPN1-201ENST00000296255 SCAF1Q9H7N4 1312 aaKnown RBP25.32■■□□□ 1.64
RPN1-201ENST00000296255 CLIP1P30622 1438 aa25.3■■□□□ 1.64
RPN1-201ENST00000296255 RAPGEF2Q9Y4G8 1499 aa25.27■■□□□ 1.64
RPN1-201ENST00000296255 TOP2BQ02880 1626 aa25.25■■□□□ 1.63
RPN1-201ENST00000296255 VPS8Q8N3P4 1428 aa25.22■■□□□ 1.63
RPN1-201ENST00000296255 DIEXFQ68CQ4 756 aaKnown RBP25.19■■□□□ 1.62
RPN1-201ENST00000296255 BIVM-ERCC5R4GMW8 1640 aa25.18■■□□□ 1.62
RPN1-201ENST00000296255 HNRNPUL2Q1KMD3 747 aaKnown RBP25.09■■□□□ 1.61
RPN1-201ENST00000296255 HMGXB3Q12766 1538 aa25.07■■□□□ 1.6
RPN1-201ENST00000296255 NCAPD3P42695 1498 aa25.07■■□□□ 1.6
RPN1-201ENST00000296255 RANGAP1P46060 587 aaPredicted RBP25.05■■□□□ 1.6
RPN1-201ENST00000296255 ACIN1Q9UKV3 1341 aaKnown RBP25.04■■□□□ 1.6
RPN1-201ENST00000296255 PRXQ9BXM0 1461 aa25.02■■□□□ 1.6
RPN1-201ENST00000296255 ERICH3Q5RHP9 1530 aa25.02■■□□□ 1.6
RPN1-201ENST00000296255 NEUROD1Q13562 356 aa25.01■■□□□ 1.59
RPN1-201ENST00000296255 APLP2Q06481 763 aa25■■□□□ 1.59
RPN1-201ENST00000296255 CUX1P39880 1505 aa25■■□□□ 1.59
RPN1-201ENST00000296255 ZNF316A6NFI3 1004 aaPredicted RBP25■■□□□ 1.59
RPN1-201ENST00000296255 ARAP1Q96P48 1450 aa24.93■■□□□ 1.58
RPN1-201ENST00000296255 CFTRP13569 1480 aa24.89■■□□□ 1.58
RPN1-201ENST00000296255 KIF27Q86VH2 1401 aa24.85■■□□□ 1.57
RPN1-201ENST00000296255 CENPBP07199 599 aaPredicted RBP24.83■■□□□ 1.57
RPN1-201ENST00000296255 KANK4Q5T7N3 995 aaPredicted RBP24.78■■□□□ 1.56
RPN1-201ENST00000296255 PELP1Q8IZL8 1130 aaKnown RBP24.77■■□□□ 1.56
RPN1-201ENST00000296255 GTF3C3Q9Y5Q9 886 aa24.74■■□□□ 1.55
RPN1-201ENST00000296255 PRDM2Q13029 1718 aa24.72■■□□□ 1.55
RPN1-201ENST00000296255 ARHGAP35Q9NRY4 1499 aa24.69■■□□□ 1.54
RPN1-201ENST00000296255 DHX57Q6P158 1386 aaKnown RBP24.67■■□□□ 1.54
RPN1-201ENST00000296255 MIER1Q8N108 512 aa24.67■■□□□ 1.54
RPN1-201ENST00000296255 RRBP1Q9P2E9 1410 aaKnown RBP24.66■■□□□ 1.54
RPN1-201ENST00000296255 CLSPNQ9HAW4 1339 aa24.62■■□□□ 1.53
RPN1-201ENST00000296255 CUX2O14529 1486 aa24.61■■□□□ 1.53
RPN1-201ENST00000296255 IGF1RP08069 1367 aa24.61■■□□□ 1.53
RPN1-201ENST00000296255 CADPSQ9ULU8 1353 aa24.57■■□□□ 1.52
RPN1-201ENST00000296255 YTHDC1Q96MU7 727 aaKnown RBP24.57■■□□□ 1.52
RPN1-201ENST00000296255 CCNB3Q8WWL7 1395 aa24.52■■□□□ 1.52
RPN1-201ENST00000296255 FGD5Q6ZNL6 1462 aa24.52■■□□□ 1.52
RPN1-201ENST00000296255 CARMIL1Q5VZK9 1371 aa24.47■■□□□ 1.51
RPN1-201ENST00000296255 TIAM1Q13009 1591 aa24.44■■□□□ 1.5
RPN1-201ENST00000296255 MAP3K1Q13233 1512 aa24.42■■□□□ 1.5
RPN1-201ENST00000296255 CC2D2AQ9P2K1 1620 aa24.39■■□□□ 1.49
RPN1-201ENST00000296255 ITGAEP38570 1179 aa24.38■■□□□ 1.49
RPN1-201ENST00000296255 FANCD2Q9BXW9 1451 aa24.35■■□□□ 1.49
RPN1-201ENST00000296255 LRRC9Q6ZRR7 1453 aa24.34■■□□□ 1.49
RPN1-201ENST00000296255 RAB3GAP2Q9H2M9 1393 aa24.31■■□□□ 1.48
RPN1-201ENST00000296255 PHLDB1Q86UU1 1377 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms