RNA–Protein interactions for RNA: ENST00000233630.10

PCGF1-201, Transcript of polycomb group ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCGF1, Length 1,792 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1-201ENST00000233630 NISCHQ9Y2I1 1504 aa38.48■■■■□ 3.75
PCGF1-201ENST00000233630 CCDC180Q9P1Z9 1646 aa33.65■■■□□ 2.98
PCGF1-201ENST00000233630 ZCCHC6Q5VYS8 1495 aaKnown RBP32.32■■■□□ 2.76
PCGF1-201ENST00000233630 ABCC9O60706 1549 aa31.88■■■□□ 2.69
PCGF1-201ENST00000233630 DCAF1Q9Y4B6 1507 aa31.87■■■□□ 2.69
PCGF1-201ENST00000233630 MYO15BQ96JP2 1530 aa31.57■■■□□ 2.64
PCGF1-201ENST00000233630 DCAF8L2P0C7V8 631 aa31.56■■■□□ 2.64
PCGF1-201ENST00000233630 NACADO15069 1562 aa31.35■■■□□ 2.61
PCGF1-201ENST00000233630 SHROOM4Q9ULL8 1493 aa31.1■■■□□ 2.57
PCGF1-201ENST00000233630 RB1CC1Q8TDY2 1594 aa31.09■■■□□ 2.57
PCGF1-201ENST00000233630 SCRIBQ14160 1630 aa30.85■■■□□ 2.53
PCGF1-201ENST00000233630 UNC13AQ9UPW8 1703 aa30.51■■■□□ 2.48
PCGF1-201ENST00000233630 BICRAQ9NZM4 1560 aa30.26■■■□□ 2.43
PCGF1-201ENST00000233630 PABPN1Q86U42 306 aaKnown RBP eCLIP29.99■■■□□ 2.39
PCGF1-201ENST00000233630 CECR2Q9BXF3 1484 aa29.9■■■□□ 2.38
PCGF1-201ENST00000233630 SUPT5HO00267 1087 aaKnown RBP29.79■■■□□ 2.36
PCGF1-201ENST00000233630 RSF1Q96T23 1441 aaPredicted RBP29.78■■■□□ 2.36
PCGF1-201ENST00000233630 MROH2BQ7Z745 1585 aa29.71■■■□□ 2.35
PCGF1-201ENST00000233630 BAZ1AQ9NRL2 1556 aaPredicted RBP29.7■■■□□ 2.34
PCGF1-201ENST00000233630 SMARCA4P51532 1647 aa29.61■■■□□ 2.33
PCGF1-201ENST00000233630 WIZO95785 1651 aa29.44■■■□□ 2.3
PCGF1-201ENST00000233630 PEG3Q9GZU2 1588 aa29.32■■■□□ 2.28
PCGF1-201ENST00000233630 EIF4G1Q04637 1599 aaKnown RBP29.3■■■□□ 2.28
PCGF1-201ENST00000233630 ATAD2BQ9ULI0 1458 aa29.16■■■□□ 2.26
PCGF1-201ENST00000233630 TOP2AP11388 1531 aaKnown RBP29.15■■■□□ 2.26
PCGF1-201ENST00000233630 SMARCA2P51531 1590 aa29.12■■■□□ 2.25
PCGF1-201ENST00000233630 NCAPD3P42695 1498 aa28.97■■■□□ 2.23
PCGF1-201ENST00000233630 BAZ1BQ9UIG0 1483 aaKnown RBP28.94■■■□□ 2.22
PCGF1-201ENST00000233630 HMGXB3Q12766 1538 aa28.92■■■□□ 2.22
PCGF1-201ENST00000233630 CC2D2AQ9P2K1 1620 aa28.9■■■□□ 2.22
PCGF1-201ENST00000233630 CCDC88BA6NC98 1476 aa28.83■■■□□ 2.21
PCGF1-201ENST00000233630 CHIC1Q5VXU3 224 aa28.53■■■□□ 2.16
PCGF1-201ENST00000233630 DNAJC5BQ9UF47 199 aa28.32■■■□□ 2.12
PCGF1-201ENST00000233630 CFTRP13569 1480 aa28.27■■■□□ 2.12
PCGF1-201ENST00000233630 CADPSQ9ULU8 1353 aa28.16■■■□□ 2.1
PCGF1-201ENST00000233630 ABCC8Q09428 1581 aa28.14■■■□□ 2.1
PCGF1-201ENST00000233630 PRDM2Q13029 1718 aa28.1■■■□□ 2.09
PCGF1-201ENST00000233630 TRIM41Q8WV44 630 aa28.04■■■□□ 2.08
PCGF1-201ENST00000233630 WRNQ14191 1432 aaPredicted RBP eCLIP27.98■■■□□ 2.07
PCGF1-201ENST00000233630 NESP48681 1621 aa27.98■■■□□ 2.07
PCGF1-201ENST00000233630 LAMC3Q9Y6N6 1575 aa27.98■■■□□ 2.07
PCGF1-201ENST00000233630 SYNJ1O43426 1573 aa27.92■■■□□ 2.06
PCGF1-201ENST00000233630 FANCD2Q9BXW9 1451 aa27.84■■■□□ 2.05
PCGF1-201ENST00000233630 TOP2BQ02880 1626 aa27.82■■■□□ 2.04
PCGF1-201ENST00000233630 BIVM-ERCC5R4GMW8 1640 aa27.81■■■□□ 2.04
PCGF1-201ENST00000233630 CUX1P39880 1505 aa27.81■■■□□ 2.04
PCGF1-201ENST00000233630 PDS5BQ9NTI5 1447 aa27.71■■■□□ 2.03
PCGF1-201ENST00000233630 CEP164Q9UPV0 1460 aa27.67■■■□□ 2.02
PCGF1-201ENST00000233630 KIF21AQ7Z4S6 1674 aa27.64■■■□□ 2.02
PCGF1-201ENST00000233630 DNMBPQ6XZF7 1577 aa27.59■■■□□ 2.01
PCGF1-201ENST00000233630 SOGA1O94964 1423 aa27.58■■■□□ 2.01
PCGF1-201ENST00000233630 URB2Q14146 1524 aaKnown RBP27.55■■■□□ 2
PCGF1-201ENST00000233630 TOPBP1Q92547 1522 aa27.54■■■□□ 2
PCGF1-201ENST00000233630 RUSC2Q8N2Y8 1516 aa27.51■■□□□ 1.99
PCGF1-201ENST00000233630 EEA1Q15075 1411 aa27.49■■□□□ 1.99
PCGF1-201ENST00000233630 FGD5Q6ZNL6 1462 aa27.49■■□□□ 1.99
PCGF1-201ENST00000233630 FAM9AQ8IZU1 332 aaPredicted RBP27.48■■□□□ 1.99
PCGF1-201ENST00000233630 MRC2Q9UBG0 1479 aa27.41■■□□□ 1.98
PCGF1-201ENST00000233630 POLA1P09884 1462 aaPredicted RBP27.4■■□□□ 1.98
PCGF1-201ENST00000233630 LOC105371045A0A1W2PR82 267 aa27.37■■□□□ 1.97
PCGF1-201ENST00000233630 WDR62O43379 1518 aa27.32■■□□□ 1.96
PCGF1-201ENST00000233630 CSRNP3Q8WYN3 585 aa27.3■■□□□ 1.96
PCGF1-201ENST00000233630 ERCC6Q03468 1493 aa27.3■■□□□ 1.96
PCGF1-201ENST00000233630 THOC2Q8NI27 1593 aaKnown RBP27.29■■□□□ 1.96
PCGF1-201ENST00000233630 RAD54L2Q9Y4B4 1467 aa27.28■■□□□ 1.96
PCGF1-201ENST00000233630 ABCA10Q8WWZ4 1543 aa27.27■■□□□ 1.96
PCGF1-201ENST00000233630 KIF27Q86VH2 1401 aa27.27■■□□□ 1.96
PCGF1-201ENST00000233630 CUX2O14529 1486 aa27.25■■□□□ 1.95
PCGF1-201ENST00000233630 WDR97A6NE52 1622 aa27.24■■□□□ 1.95
PCGF1-201ENST00000233630 TARBP1Q13395 1621 aaKnown RBP27.19■■□□□ 1.94
PCGF1-201ENST00000233630 KIF21BO75037 1637 aa27.18■■□□□ 1.94
PCGF1-201ENST00000233630 PRXQ9BXM0 1461 aa27.13■■□□□ 1.93
PCGF1-201ENST00000233630 GOLGA3Q08378 1498 aa27.09■■□□□ 1.93
PCGF1-201ENST00000233630 IGF1RP08069 1367 aa27.09■■□□□ 1.93
PCGF1-201ENST00000233630 ABCA5Q8WWZ7 1642 aa27.09■■□□□ 1.93
PCGF1-201ENST00000233630 EHMT2Q96KQ7 1210 aa27.04■■□□□ 1.92
PCGF1-201ENST00000233630 IFT140Q96RY7 1462 aa27.04■■□□□ 1.92
PCGF1-201ENST00000233630 RAPGEF2Q9Y4G8 1499 aa27.03■■□□□ 1.92
PCGF1-201ENST00000233630 ERICH3Q5RHP9 1530 aa27.03■■□□□ 1.92
PCGF1-201ENST00000233630 TDRD9Q8NDG6 1382 aaKnown RBP27■■□□□ 1.91
PCGF1-201ENST00000233630 TNIKQ9UKE5 1360 aa26.98■■□□□ 1.91
PCGF1-201ENST00000233630 GAPVD1Q14C86 1478 aa26.97■■□□□ 1.91
PCGF1-201ENST00000233630 ZNF608Q9ULD9 1512 aaPredicted RBP26.92■■□□□ 1.9
PCGF1-201ENST00000233630 CARMIL1Q5VZK9 1371 aa26.91■■□□□ 1.9
PCGF1-201ENST00000233630 CUL7Q14999 1698 aa26.9■■□□□ 1.9
PCGF1-201ENST00000233630 AQRO60306 1485 aaKnown RBP eCLIP26.88■■□□□ 1.891e-6■■■■□ 21.5
PCGF1-201ENST00000233630 PBRM1Q86U86 1689 aa26.85■■□□□ 1.89
PCGF1-201ENST00000233630 UBTFP17480 764 aaKnown RBP26.84■■□□□ 1.89
PCGF1-201ENST00000233630 EIF4G3O43432 1585 aaKnown RBP26.82■■□□□ 1.88
PCGF1-201ENST00000233630 CEP162Q5TB80 1403 aa26.81■■□□□ 1.88
PCGF1-201ENST00000233630 GRIN2BQ13224 1484 aa26.79■■□□□ 1.88
PCGF1-201ENST00000233630 ADAMTS12P58397 1594 aa26.74■■□□□ 1.87
PCGF1-201ENST00000233630 FHAD1B1AJZ9 1412 aa26.68■■□□□ 1.86
PCGF1-201ENST00000233630 SNAPC4Q5SXM2 1469 aa26.64■■□□□ 1.86
PCGF1-201ENST00000233630 CLIP1P30622 1438 aa26.63■■□□□ 1.85
PCGF1-201ENST00000233630 MAGI1Q96QZ7 1491 aaPredicted RBP26.61■■□□□ 1.85
PCGF1-201ENST00000233630 CTTNBP2Q8WZ74 1663 aa26.56■■□□□ 1.84
PCGF1-201ENST00000233630 SYNJ2O15056 1496 aa26.5■■□□□ 1.83
PCGF1-201ENST00000233630 GRIN2AQ12879 1464 aa26.49■■□□□ 1.83
PCGF1-201ENST00000233630 ARHGAP35Q9NRY4 1499 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 275.4 ms