RNA–Protein interactions for RNA: ENST00000530472.5

PDE4DIP-230, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 1 (best) BASIC

Gene PDE4DIP, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-230ENST00000530472 NISCHQ9Y2I1 1504 aa37.96■■■■□ 3.67
PDE4DIP-230ENST00000530472 CCDC180Q9P1Z9 1646 aa33.65■■■□□ 2.98
PDE4DIP-230ENST00000530472 ABCC9O60706 1549 aa32.81■■■□□ 2.84
PDE4DIP-230ENST00000530472 ZCCHC6Q5VYS8 1495 aaKnown RBP31.66■■■□□ 2.66
PDE4DIP-230ENST00000530472 DCAF8L2P0C7V8 631 aa31.66■■■□□ 2.66
PDE4DIP-230ENST00000530472 NACADO15069 1562 aa31.58■■■□□ 2.65
PDE4DIP-230ENST00000530472 RB1CC1Q8TDY2 1594 aa31.58■■■□□ 2.65
PDE4DIP-230ENST00000530472 MYO15BQ96JP2 1530 aa31.43■■■□□ 2.62
PDE4DIP-230ENST00000530472 DCAF1Q9Y4B6 1507 aa31.37■■■□□ 2.61
PDE4DIP-230ENST00000530472 UNC13AQ9UPW8 1703 aa30.97■■■□□ 2.55
PDE4DIP-230ENST00000530472 SCRIBQ14160 1630 aa30.77■■■□□ 2.52
PDE4DIP-230ENST00000530472 PABPN1Q86U42 306 aaKnown RBP eCLIP30.7■■■□□ 2.5
PDE4DIP-230ENST00000530472 BICRAQ9NZM4 1560 aa30.68■■■□□ 2.5
PDE4DIP-230ENST00000530472 SHROOM4Q9ULL8 1493 aa30.41■■■□□ 2.46
PDE4DIP-230ENST00000530472 DNAJC5BQ9UF47 199 aa29.99■■■□□ 2.39
PDE4DIP-230ENST00000530472 EIF4G1Q04637 1599 aaKnown RBP29.84■■■□□ 2.37
PDE4DIP-230ENST00000530472 CC2D2AQ9P2K1 1620 aa29.68■■■□□ 2.34
PDE4DIP-230ENST00000530472 CECR2Q9BXF3 1484 aa29.6■■■□□ 2.33
PDE4DIP-230ENST00000530472 SMARCA4P51532 1647 aa29.43■■■□□ 2.3
PDE4DIP-230ENST00000530472 BAZ1AQ9NRL2 1556 aaPredicted RBP29.39■■■□□ 2.29
PDE4DIP-230ENST00000530472 SUPT5HO00267 1087 aaKnown RBP29.34■■■□□ 2.29
PDE4DIP-230ENST00000530472 MROH2BQ7Z745 1585 aa29.29■■■□□ 2.28
PDE4DIP-230ENST00000530472 ATAD2BQ9ULI0 1458 aa29.21■■■□□ 2.27
PDE4DIP-230ENST00000530472 SMARCA2P51531 1590 aa29.16■■■□□ 2.26
PDE4DIP-230ENST00000530472 NCAPD3P42695 1498 aa29.15■■■□□ 2.26
PDE4DIP-230ENST00000530472 PEG3Q9GZU2 1588 aa29.12■■■□□ 2.25
PDE4DIP-230ENST00000530472 HMGXB3Q12766 1538 aa29.03■■■□□ 2.24
PDE4DIP-230ENST00000530472 WIZO95785 1651 aa29■■■□□ 2.23
PDE4DIP-230ENST00000530472 RSF1Q96T23 1441 aaPredicted RBP28.99■■■□□ 2.23
PDE4DIP-230ENST00000530472 BAZ1BQ9UIG0 1483 aaKnown RBP28.97■■■□□ 2.23
PDE4DIP-230ENST00000530472 TOP2AP11388 1531 aaKnown RBP28.65■■■□□ 2.18
PDE4DIP-230ENST00000530472 NESP48681 1621 aa28.46■■■□□ 2.15
PDE4DIP-230ENST00000530472 LAMC3Q9Y6N6 1575 aa28.35■■■□□ 2.13
PDE4DIP-230ENST00000530472 CCDC88BA6NC98 1476 aa28.33■■■□□ 2.13
PDE4DIP-230ENST00000530472 CADPSQ9ULU8 1353 aa28.31■■■□□ 2.12
PDE4DIP-230ENST00000530472 ERCC6Q03468 1493 aa28.23■■■□□ 2.11
PDE4DIP-230ENST00000530472 CFTRP13569 1480 aa28.19■■■□□ 2.1
PDE4DIP-230ENST00000530472 CHIC1Q5VXU3 224 aa28.18■■■□□ 2.1
PDE4DIP-230ENST00000530472 KIF21AQ7Z4S6 1674 aa28.14■■■□□ 2.09
PDE4DIP-230ENST00000530472 PDS5BQ9NTI5 1447 aa28.13■■■□□ 2.09
PDE4DIP-230ENST00000530472 PRDM2Q13029 1718 aa28.01■■■□□ 2.07
PDE4DIP-230ENST00000530472 FANCD2Q9BXW9 1451 aa28■■■□□ 2.07
PDE4DIP-230ENST00000530472 THOC2Q8NI27 1593 aaKnown RBP27.98■■■□□ 2.07
PDE4DIP-230ENST00000530472 CEP164Q9UPV0 1460 aa27.94■■■□□ 2.06
PDE4DIP-230ENST00000530472 MRC2Q9UBG0 1479 aa27.87■■■□□ 2.05
PDE4DIP-230ENST00000530472 CUX2O14529 1486 aa27.85■■■□□ 2.05
PDE4DIP-230ENST00000530472 WDR62O43379 1518 aa27.78■■■□□ 2.04
PDE4DIP-230ENST00000530472 URB2Q14146 1524 aaKnown RBP27.73■■■□□ 2.03
PDE4DIP-230ENST00000530472 TOPBP1Q92547 1522 aa27.58■■■□□ 2.01
PDE4DIP-230ENST00000530472 TRIM41Q8WV44 630 aa27.57■■■□□ 2
PDE4DIP-230ENST00000530472 DNMBPQ6XZF7 1577 aa27.56■■■□□ 2
PDE4DIP-230ENST00000530472 ABCC8Q09428 1581 aa27.53■■■□□ 2
PDE4DIP-230ENST00000530472 CUX1P39880 1505 aa27.46■■□□□ 1.99
PDE4DIP-230ENST00000530472 POLA1P09884 1462 aaPredicted RBP27.37■■□□□ 1.97
PDE4DIP-230ENST00000530472 IFT140Q96RY7 1462 aa27.33■■□□□ 1.97
PDE4DIP-230ENST00000530472 FGD5Q6ZNL6 1462 aa27.33■■□□□ 1.96
PDE4DIP-230ENST00000530472 WRNQ14191 1432 aaPredicted RBP eCLIP27.32■■□□□ 1.96
PDE4DIP-230ENST00000530472 TARBP1Q13395 1621 aaKnown RBP27.29■■□□□ 1.96
PDE4DIP-230ENST00000530472 SYNJ1O43426 1573 aa27.29■■□□□ 1.96
PDE4DIP-230ENST00000530472 RAD54L2Q9Y4B4 1467 aa27.27■■□□□ 1.96
PDE4DIP-230ENST00000530472 ZNF608Q9ULD9 1512 aaPredicted RBP27.26■■□□□ 1.96
PDE4DIP-230ENST00000530472 TOP2BQ02880 1626 aa27.25■■□□□ 1.95
PDE4DIP-230ENST00000530472 BIVM-ERCC5R4GMW8 1640 aa27.25■■□□□ 1.95
PDE4DIP-230ENST00000530472 SOGA1O94964 1423 aa27.23■■□□□ 1.95
PDE4DIP-230ENST00000530472 EIF4G3O43432 1585 aaKnown RBP27.15■■□□□ 1.94
PDE4DIP-230ENST00000530472 AQRO60306 1485 aaKnown RBP eCLIP27.12■■□□□ 1.93
PDE4DIP-230ENST00000530472 WDR97A6NE52 1622 aa27.11■■□□□ 1.93
PDE4DIP-230ENST00000530472 LOC105371045A0A1W2PR82 267 aa27.11■■□□□ 1.93
PDE4DIP-230ENST00000530472 TDRD9Q8NDG6 1382 aaKnown RBP27.09■■□□□ 1.93
PDE4DIP-230ENST00000530472 FAM9AQ8IZU1 332 aaPredicted RBP27.08■■□□□ 1.93
PDE4DIP-230ENST00000530472 ABCA10Q8WWZ4 1543 aa27.05■■□□□ 1.92
PDE4DIP-230ENST00000530472 ABCA5Q8WWZ7 1642 aa26.95■■□□□ 1.91
PDE4DIP-230ENST00000530472 GAPVD1Q14C86 1478 aa26.93■■□□□ 1.9
PDE4DIP-230ENST00000530472 PBRM1Q86U86 1689 aa26.89■■□□□ 1.9
PDE4DIP-230ENST00000530472 GRIN2BQ13224 1484 aa26.89■■□□□ 1.89
PDE4DIP-230ENST00000530472 SNAPC4Q5SXM2 1469 aa26.86■■□□□ 1.89
PDE4DIP-230ENST00000530472 EEA1Q15075 1411 aa26.85■■□□□ 1.89
PDE4DIP-230ENST00000530472 DNAJC5Q9H3Z4 198 aa26.8■■□□□ 1.88
PDE4DIP-230ENST00000530472 MAGI1Q96QZ7 1491 aaPredicted RBP26.79■■□□□ 1.88
PDE4DIP-230ENST00000530472 CHD1O14646 1710 aa26.79■■□□□ 1.88
PDE4DIP-230ENST00000530472 RUSC2Q8N2Y8 1516 aa26.75■■□□□ 1.87
PDE4DIP-230ENST00000530472 FBLN2P98095 1184 aa26.74■■□□□ 1.87
PDE4DIP-230ENST00000530472 OSCARQ8IYS5 282 aa26.73■■□□□ 1.87
PDE4DIP-230ENST00000530472 ERICH3Q5RHP9 1530 aa26.72■■□□□ 1.87
PDE4DIP-230ENST00000530472 KIF27Q86VH2 1401 aa26.71■■□□□ 1.87
PDE4DIP-230ENST00000530472 EHMT2Q96KQ7 1210 aa26.7■■□□□ 1.87
PDE4DIP-230ENST00000530472 SYNJ2O15056 1496 aa26.69■■□□□ 1.86
PDE4DIP-230ENST00000530472 CSRNP3Q8WYN3 585 aa26.69■■□□□ 1.86
PDE4DIP-230ENST00000530472 ADAMTS12P58397 1594 aa26.68■■□□□ 1.86
PDE4DIP-230ENST00000530472 CHMP7Q8WUX9 453 aaPredicted RBP26.66■■□□□ 1.86
PDE4DIP-230ENST00000530472 IGF1RP08069 1367 aa26.61■■□□□ 1.85
PDE4DIP-230ENST00000530472 FHAD1B1AJZ9 1412 aa26.61■■□□□ 1.85
PDE4DIP-230ENST00000530472 GRIN2AQ12879 1464 aa26.56■■□□□ 1.84
PDE4DIP-230ENST00000530472 CUL7Q14999 1698 aa26.51■■□□□ 1.84
PDE4DIP-230ENST00000530472 GOLGA3Q08378 1498 aa26.5■■□□□ 1.83
PDE4DIP-230ENST00000530472 KIF21BO75037 1637 aa26.5■■□□□ 1.83
PDE4DIP-230ENST00000530472 CLASP1Q7Z460 1538 aa26.47■■□□□ 1.83
PDE4DIP-230ENST00000530472 CEP170Q5SW79 1584 aa26.45■■□□□ 1.83
PDE4DIP-230ENST00000530472 CARMIL1Q5VZK9 1371 aa26.45■■□□□ 1.82
PDE4DIP-230ENST00000530472 TNIKQ9UKE5 1360 aa26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms