Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 RAB43-205ENST00000393308 4193 ntAPPRIS P1 TSL 4 BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 TNRC6C-202ENST00000335749 9740 ntAPPRIS P4 TSL 5 BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 GAS7-204ENST00000437099 8003 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 RAD1-203ENST00000382038 5770 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 PHGDH-209ENST00000641074 1780 ntBASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 HTR7P1-201ENST00000538670 1336 ntBASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 GALC-206ENST00000544807 2528 ntTSL 2 BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 AC016396.2-201ENST00000562575 1417 ntBASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 MIR497HG-202ENST00000572453 3838 ntBASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 TBC1D22A-203ENST00000380995 3934 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 MOK-233ENST00000524214 1539 ntTSL 2 BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 HLA-J-201ENST00000462773 1622 ntBASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 AC099521.3-201ENST00000624251 2938 ntBASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 ZBED4-201ENST00000216268 6893 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 AC007292.2-201ENST00000593524 1812 ntBASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 PARP1-202ENST00000366792 553 ntTSL 3 BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 BET1L-204ENST00000410108 637 ntTSL 3 BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 AC091305.1-201ENST00000479476 895 ntBASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 STOX2-205ENST00000513034 807 ntTSL 3 BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 CFL2-205ENST00000555765 632 ntTSL 2 BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 AC016405.3-201ENST00000607710 860 ntBASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 LINC01451-201ENST00000623792 534 ntBASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 PTGR2-205ENST00000555661 3851 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 C9orf106-201ENST00000316786 3145 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 LINC00528-201ENST00000600723 2160 ntBASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 LINC00552-201ENST00000625151 2579 ntBASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 CACNA1C-210ENST00000399606 6571 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 CACNA1C-212ENST00000399621 6568 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 CACNA1C-213ENST00000399629 6562 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 CACNA1C-215ENST00000399637 6568 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 CACNA1C-216ENST00000399638 6595 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 CACNA1C-221ENST00000402845 6568 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SPTSSBQ8NFR3 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SPTSSBQ8NFR3 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SPTSSBQ8NFR3 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC9.05□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms