RNA–Protein interactions for RNA: ENST00000509791.7

SEC11C-202, Transcript of SEC11 homolog C, signal peptidase complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SEC11C, Length 2,054 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11C-202ENST00000509791 NISCHQ9Y2I1 1504 aa44.42■■■■■ 4.7
SEC11C-202ENST00000509791 CCDC180Q9P1Z9 1646 aa38.85■■■■□ 3.81
SEC11C-202ENST00000509791 ABCC9O60706 1549 aa37.48■■■■□ 3.59
SEC11C-202ENST00000509791 ZCCHC6Q5VYS8 1495 aaKnown RBP37.19■■■■□ 3.54
SEC11C-202ENST00000509791 DCAF8L2P0C7V8 631 aa37.11■■■■□ 3.53
SEC11C-202ENST00000509791 DCAF1Q9Y4B6 1507 aa36.59■■■■□ 3.45
SEC11C-202ENST00000509791 NACADO15069 1562 aa36.36■■■■□ 3.41
SEC11C-202ENST00000509791 MYO15BQ96JP2 1530 aa36.33■■■■□ 3.41
SEC11C-202ENST00000509791 RB1CC1Q8TDY2 1594 aa36.2■■■■□ 3.39
SEC11C-202ENST00000509791 SHROOM4Q9ULL8 1493 aa36.11■■■■□ 3.37
SEC11C-202ENST00000509791 SCRIBQ14160 1630 aa35.86■■■■□ 3.33
SEC11C-202ENST00000509791 UNC13AQ9UPW8 1703 aa35.5■■■■□ 3.27
SEC11C-202ENST00000509791 PABPN1Q86U42 306 aaKnown RBP eCLIP35.32■■■■□ 3.24
SEC11C-202ENST00000509791 BICRAQ9NZM4 1560 aa35.18■■■■□ 3.22
SEC11C-202ENST00000509791 CECR2Q9BXF3 1484 aa34.67■■■■□ 3.14
SEC11C-202ENST00000509791 SUPT5HO00267 1087 aaKnown RBP34.46■■■■□ 3.11
SEC11C-202ENST00000509791 MROH2BQ7Z745 1585 aa34.37■■■■□ 3.09
SEC11C-202ENST00000509791 BAZ1AQ9NRL2 1556 aaPredicted RBP34.3■■■■□ 3.08
SEC11C-202ENST00000509791 RSF1Q96T23 1441 aaPredicted RBP34.3■■■■□ 3.08
SEC11C-202ENST00000509791 SMARCA4P51532 1647 aa34.25■■■■□ 3.07
SEC11C-202ENST00000509791 EIF4G1Q04637 1599 aaKnown RBP34.17■■■■□ 3.06
SEC11C-202ENST00000509791 WIZO95785 1651 aa34.06■■■■□ 3.04
SEC11C-202ENST00000509791 ATAD2BQ9ULI0 1458 aa33.85■■■■□ 3.01
SEC11C-202ENST00000509791 CC2D2AQ9P2K1 1620 aa33.82■■■■□ 3
SEC11C-202ENST00000509791 PEG3Q9GZU2 1588 aa33.78■■■■□ 3
SEC11C-202ENST00000509791 SMARCA2P51531 1590 aa33.74■■■□□ 2.99
SEC11C-202ENST00000509791 BAZ1BQ9UIG0 1483 aaKnown RBP33.63■■■□□ 2.97
SEC11C-202ENST00000509791 DNAJC5BQ9UF47 199 aa33.63■■■□□ 2.97
SEC11C-202ENST00000509791 TOP2AP11388 1531 aaKnown RBP33.6■■■□□ 2.97
SEC11C-202ENST00000509791 NCAPD3P42695 1498 aa33.6■■■□□ 2.97
SEC11C-202ENST00000509791 HMGXB3Q12766 1538 aa33.47■■■□□ 2.95
SEC11C-202ENST00000509791 CCDC88BA6NC98 1476 aa33.33■■■□□ 2.93
SEC11C-202ENST00000509791 CADPSQ9ULU8 1353 aa32.75■■■□□ 2.83
SEC11C-202ENST00000509791 NESP48681 1621 aa32.75■■■□□ 2.83
SEC11C-202ENST00000509791 CFTRP13569 1480 aa32.73■■■□□ 2.83
SEC11C-202ENST00000509791 CHIC1Q5VXU3 224 aa32.6■■■□□ 2.81
SEC11C-202ENST00000509791 ABCC8Q09428 1581 aa32.52■■■□□ 2.8
SEC11C-202ENST00000509791 LAMC3Q9Y6N6 1575 aa32.52■■■□□ 2.8
SEC11C-202ENST00000509791 PRDM2Q13029 1718 aa32.42■■■□□ 2.78
SEC11C-202ENST00000509791 FANCD2Q9BXW9 1451 aa32.4■■■□□ 2.78
SEC11C-202ENST00000509791 TRIM41Q8WV44 630 aa32.34■■■□□ 2.77
SEC11C-202ENST00000509791 PDS5BQ9NTI5 1447 aa32.33■■■□□ 2.77
SEC11C-202ENST00000509791 WRNQ14191 1432 aaPredicted RBP eCLIP32.29■■■□□ 2.76
SEC11C-202ENST00000509791 KIF21AQ7Z4S6 1674 aa32.25■■■□□ 2.75
SEC11C-202ENST00000509791 CEP164Q9UPV0 1460 aa32.23■■■□□ 2.75
SEC11C-202ENST00000509791 SYNJ1O43426 1573 aa32.2■■■□□ 2.74
SEC11C-202ENST00000509791 CUX1P39880 1505 aa32.15■■■□□ 2.74
SEC11C-202ENST00000509791 ERCC6Q03468 1493 aa32.14■■■□□ 2.74
SEC11C-202ENST00000509791 URB2Q14146 1524 aaKnown RBP32.05■■■□□ 2.72
SEC11C-202ENST00000509791 TOP2BQ02880 1626 aa32.04■■■□□ 2.72
SEC11C-202ENST00000509791 TOPBP1Q92547 1522 aa31.98■■■□□ 2.71
SEC11C-202ENST00000509791 BIVM-ERCC5R4GMW8 1640 aa31.98■■■□□ 2.71
SEC11C-202ENST00000509791 DNMBPQ6XZF7 1577 aa31.95■■■□□ 2.71
SEC11C-202ENST00000509791 MRC2Q9UBG0 1479 aa31.95■■■□□ 2.71
SEC11C-202ENST00000509791 FGD5Q6ZNL6 1462 aa31.88■■■□□ 2.69
SEC11C-202ENST00000509791 FAM9AQ8IZU1 332 aaPredicted RBP31.87■■■□□ 2.69
SEC11C-202ENST00000509791 THOC2Q8NI27 1593 aaKnown RBP31.83■■■□□ 2.69
SEC11C-202ENST00000509791 POLA1P09884 1462 aaPredicted RBP31.8■■■□□ 2.68
SEC11C-202ENST00000509791 SOGA1O94964 1423 aa31.8■■■□□ 2.68
SEC11C-202ENST00000509791 WDR62O43379 1518 aa31.78■■■□□ 2.68
SEC11C-202ENST00000509791 RAD54L2Q9Y4B4 1467 aa31.77■■■□□ 2.68
SEC11C-202ENST00000509791 RUSC2Q8N2Y8 1516 aa31.74■■■□□ 2.67
SEC11C-202ENST00000509791 CUX2O14529 1486 aa31.63■■■□□ 2.65
SEC11C-202ENST00000509791 EHMT2Q96KQ7 1210 aa31.56■■■□□ 2.64
SEC11C-202ENST00000509791 ABCA10Q8WWZ4 1543 aa31.53■■■□□ 2.64
SEC11C-202ENST00000509791 TARBP1Q13395 1621 aaKnown RBP31.53■■■□□ 2.64
SEC11C-202ENST00000509791 TDRD9Q8NDG6 1382 aaKnown RBP31.53■■■□□ 2.64
SEC11C-202ENST00000509791 KIF27Q86VH2 1401 aa31.5■■■□□ 2.63
SEC11C-202ENST00000509791 CSRNP3Q8WYN3 585 aa31.46■■■□□ 2.63
SEC11C-202ENST00000509791 IFT140Q96RY7 1462 aa31.46■■■□□ 2.63
SEC11C-202ENST00000509791 LOC105371045A0A1W2PR82 267 aa31.45■■■□□ 2.63
SEC11C-202ENST00000509791 WDR97A6NE52 1622 aa31.44■■■□□ 2.62
SEC11C-202ENST00000509791 ZNF608Q9ULD9 1512 aaPredicted RBP31.44■■■□□ 2.62
SEC11C-202ENST00000509791 EEA1Q15075 1411 aa31.42■■■□□ 2.62
SEC11C-202ENST00000509791 AQRO60306 1485 aaKnown RBP eCLIP31.4■■■□□ 2.623e-6■■□□□ 13.8
SEC11C-202ENST00000509791 GAPVD1Q14C86 1478 aa31.33■■■□□ 2.61
SEC11C-202ENST00000509791 IGF1RP08069 1367 aa31.32■■■□□ 2.6
SEC11C-202ENST00000509791 ABCA5Q8WWZ7 1642 aa31.31■■■□□ 2.6
SEC11C-202ENST00000509791 EIF4G3O43432 1585 aaKnown RBP31.23■■■□□ 2.59
SEC11C-202ENST00000509791 RAPGEF2Q9Y4G8 1499 aa31.15■■■□□ 2.58
SEC11C-202ENST00000509791 CARMIL1Q5VZK9 1371 aa31.15■■■□□ 2.58
SEC11C-202ENST00000509791 PRXQ9BXM0 1461 aa31.15■■■□□ 2.58
SEC11C-202ENST00000509791 PBRM1Q86U86 1689 aa31.14■■■□□ 2.58
SEC11C-202ENST00000509791 GRIN2BQ13224 1484 aa31.14■■■□□ 2.57
SEC11C-202ENST00000509791 ERICH3Q5RHP9 1530 aa31.12■■■□□ 2.57
SEC11C-202ENST00000509791 KIF21BO75037 1637 aa31.08■■■□□ 2.57
SEC11C-202ENST00000509791 UBTFP17480 764 aaKnown RBP31.08■■■□□ 2.57
SEC11C-202ENST00000509791 GOLGA3Q08378 1498 aa31.05■■■□□ 2.56
SEC11C-202ENST00000509791 SNAPC4Q5SXM2 1469 aa31.05■■■□□ 2.56
SEC11C-202ENST00000509791 CUL7Q14999 1698 aa31.01■■■□□ 2.55
SEC11C-202ENST00000509791 ADAMTS12P58397 1594 aa30.95■■■□□ 2.55
SEC11C-202ENST00000509791 FHAD1B1AJZ9 1412 aa30.95■■■□□ 2.54
SEC11C-202ENST00000509791 FBLN2P98095 1184 aa30.94■■■□□ 2.54
SEC11C-202ENST00000509791 RANGAP1P46060 587 aaPredicted RBP30.9■■■□□ 2.54
SEC11C-202ENST00000509791 MAGI1Q96QZ7 1491 aaPredicted RBP30.9■■■□□ 2.54
SEC11C-202ENST00000509791 CHMP7Q8WUX9 453 aaPredicted RBP30.87■■■□□ 2.53
SEC11C-202ENST00000509791 TNIKQ9UKE5 1360 aa30.85■■■□□ 2.53
SEC11C-202ENST00000509791 SYNJ2O15056 1496 aa30.82■■■□□ 2.52
SEC11C-202ENST00000509791 GRIN2AQ12879 1464 aa30.77■■■□□ 2.52
SEC11C-202ENST00000509791 CEP162Q5TB80 1403 aa30.71■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms