RNA–Protein interactions for RNA: ENST00000399621.5

CACNA1C-212, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-212ENST00000399621 DCAF8L2P0C7V8 631 aa19.6■□□□□ 0.73
CACNA1C-212ENST00000399621 FAM9AQ8IZU1 332 aaPredicted RBP17.82■□□□□ 0.44
CACNA1C-212ENST00000399621 EHMT2Q96KQ7 1210 aa17.8■□□□□ 0.44
CACNA1C-212ENST00000399621 NISCHQ9Y2I1 1504 aa17.78■□□□□ 0.44
CACNA1C-212ENST00000399621 PELP1Q8IZL8 1130 aaKnown RBP17.67■□□□□ 0.42
CACNA1C-212ENST00000399621 SUPT5HO00267 1087 aaKnown RBP17.59■□□□□ 0.41
CACNA1C-212ENST00000399621 MYT1Q01538 1121 aa17.51■□□□□ 0.39
CACNA1C-212ENST00000399621 APLP2Q06481 763 aa17.39■□□□□ 0.38
CACNA1C-212ENST00000399621 ERICH6Q7L0X2 663 aa17.35■□□□□ 0.37
CACNA1C-212ENST00000399621 SHROOM4Q9ULL8 1493 aa17.24■□□□□ 0.35
CACNA1C-212ENST00000399621 ATP1B4Q9UN42 357 aaPredicted RBP17.23■□□□□ 0.35
CACNA1C-212ENST00000399621 RANGAP1P46060 587 aaPredicted RBP17.16■□□□□ 0.34
CACNA1C-212ENST00000399621 MYT1LQ9UL68 1186 aa17.11■□□□□ 0.33
CACNA1C-212ENST00000399621 TTBK1Q5TCY1 1321 aaPredicted RBP17.07■□□□□ 0.32
CACNA1C-212ENST00000399621 CCER1Q8TC90 406 aaPredicted RBP16.89■□□□□ 0.29
CACNA1C-212ENST00000399621 CHIC1Q5VXU3 224 aa16.88■□□□□ 0.29
CACNA1C-212ENST00000399621 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.66■□□□□ 0.26
CACNA1C-212ENST00000399621 HNRNPUL2Q1KMD3 747 aaKnown RBP16.66■□□□□ 0.26
CACNA1C-212ENST00000399621 CENPBP07199 599 aaPredicted RBP16.65■□□□□ 0.26
CACNA1C-212ENST00000399621 PCGF6Q9BYE7 350 aa16.6■□□□□ 0.25
CACNA1C-212ENST00000399621 SLC4A1APQ9BWU0 796 aaKnown RBP16.49■□□□□ 0.23
CACNA1C-212ENST00000399621 NEFLP07196 543 aa16.49■□□□□ 0.23
CACNA1C-212ENST00000399621 ZEB1P37275 1124 aaPredicted RBP16.47■□□□□ 0.23
CACNA1C-212ENST00000399621 UBTFP17480 764 aaKnown RBP16.41■□□□□ 0.22
CACNA1C-212ENST00000399621 POLR3GLQ9BT43 218 aa16.39■□□□□ 0.21
CACNA1C-212ENST00000399621 YTHDC1Q96MU7 727 aaKnown RBP16.39■□□□□ 0.21
CACNA1C-212ENST00000399621 TRIM41Q8WV44 630 aa16.3■□□□□ 0.2
CACNA1C-212ENST00000399621 DAXXQ9UER7 740 aaPredicted RBP16.27■□□□□ 0.19
CACNA1C-212ENST00000399621 CNGB1Q14028 1251 aaPredicted RBP16.21■□□□□ 0.19
CACNA1C-212ENST00000399621 BCANQ96GW7 911 aa16.16■□□□□ 0.18
CACNA1C-212ENST00000399621 HRCP23327 699 aa16.14■□□□□ 0.17
CACNA1C-212ENST00000399621 PLPPR3Q6T4P5 718 aa16.13■□□□□ 0.17
CACNA1C-212ENST00000399621 SLC24A1O60721 1099 aa16.11■□□□□ 0.17
CACNA1C-212ENST00000399621 ITGAEP38570 1179 aa16.1■□□□□ 0.17
CACNA1C-212ENST00000399621 FBLN2P98095 1184 aa16■□□□□ 0.15
CACNA1C-212ENST00000399621 BCL11AQ9H165 835 aa15.97■□□□□ 0.15
CACNA1C-212ENST00000399621 PPARGC1BQ86YN6 1023 aaKnown RBP15.89■□□□□ 0.13
CACNA1C-212ENST00000399621 ZNF316A6NFI3 1004 aaPredicted RBP15.86■□□□□ 0.13
CACNA1C-212ENST00000399621 ESF1Q9H501 851 aaKnown RBP15.86■□□□□ 0.13
CACNA1C-212ENST00000399621 CLSPNQ9HAW4 1339 aa15.77■□□□□ 0.12
CACNA1C-212ENST00000399621 TRIM26Q12899 539 aaPredicted RBP15.74■□□□□ 0.11
CACNA1C-212ENST00000399621 A0A0G2JS52 829 aa15.71■□□□□ 0.11
CACNA1C-212ENST00000399621 RTL5Q5HYW3 569 aaPredicted RBP15.71■□□□□ 0.1
CACNA1C-212ENST00000399621 SCAF1Q9H7N4 1312 aaKnown RBP15.68■□□□□ 0.1
CACNA1C-212ENST00000399621 ZBTB47Q9UFB7 747 aaPredicted RBP15.68■□□□□ 0.1
CACNA1C-212ENST00000399621 TRIM52Q96A61 297 aa15.66■□□□□ 0.1
CACNA1C-212ENST00000399621 PABPN1Q86U42 306 aaKnown RBP eCLIP15.65■□□□□ 0.1
CACNA1C-212ENST00000399621 STAG3Q9UJ98 1225 aa15.62■□□□□ 0.09
CACNA1C-212ENST00000399621 FAM50AQ14320 339 aaKnown RBP15.58■□□□□ 0.08
CACNA1C-212ENST00000399621 ZNF326Q5BKZ1 582 aaKnown RBP15.56■□□□□ 0.08
CACNA1C-212ENST00000399621 NEFMP07197 916 aa15.54■□□□□ 0.08
CACNA1C-212ENST00000399621 NPM1P06748 294 aaKnown RBP eCLIP15.53■□□□□ 0.08
CACNA1C-212ENST00000399621 ARID3CA6NKF2 412 aa15.52■□□□□ 0.07
CACNA1C-212ENST00000399621 PLEKHG5O94827 1062 aa15.47■□□□□ 0.07
CACNA1C-212ENST00000399621 CHGAP10645 457 aaKnown RBP15.45■□□□□ 0.06
CACNA1C-212ENST00000399621 EIF5BO60841 1220 aaKnown RBP15.42■□□□□ 0.06
CACNA1C-212ENST00000399621 DCAF1Q9Y4B6 1507 aa15.39■□□□□ 0.05
CACNA1C-212ENST00000399621 ABCC9O60706 1549 aa15.39■□□□□ 0.05
CACNA1C-212ENST00000399621 CANXP27824 592 aaKnown RBP15.38■□□□□ 0.05
CACNA1C-212ENST00000399621 ZBTB7CA1YPR0 619 aa15.38■□□□□ 0.05
CACNA1C-212ENST00000399621 ZNF777Q9ULD5 760 aaPredicted RBP15.37■□□□□ 0.05
CACNA1C-212ENST00000399621 HAP1P54257 671 aaPredicted RBP15.33■□□□□ 0.04
CACNA1C-212ENST00000399621 SENP3Q9H4L4 574 aaPredicted RBP15.33■□□□□ 0.04
CACNA1C-212ENST00000399621 NEUROD1Q13562 356 aa15.33■□□□□ 0.04
CACNA1C-212ENST00000399621 DIEXFQ68CQ4 756 aaKnown RBP15.32■□□□□ 0.04
CACNA1C-212ENST00000399621 C14orf37Q86TY3 774 aa15.32■□□□□ 0.04
CACNA1C-212ENST00000399621 LOC105371045A0A1W2PR82 267 aa15.3■□□□□ 0.04
CACNA1C-212ENST00000399621 NCBP3Q53F19 620 aaKnown RBP15.28■□□□□ 0.04
CACNA1C-212ENST00000399621 CDK11AQ9UQ88 783 aaPredicted RBP15.28■□□□□ 0.04
CACNA1C-212ENST00000399621 TULP1O00294 542 aaPredicted RBP15.27■□□□□ 0.04
CACNA1C-212ENST00000399621 NPM2Q86SE8 214 aaKnown RBP15.27■□□□□ 0.04
CACNA1C-212ENST00000399621 ANP32CO43423 234 aa15.27■□□□□ 0.03
CACNA1C-212ENST00000399621 TRHP20396 242 aaPredicted RBP15.23■□□□□ 0.03
CACNA1C-212ENST00000399621 ARID4BQ4LE39 1312 aaPredicted RBP15.22■□□□□ 0.03
CACNA1C-212ENST00000399621 P3H3Q8IVL6 736 aa15.21■□□□□ 0.02
CACNA1C-212ENST00000399621 ARXQ96QS3 562 aa15.19■□□□□ 0.02
CACNA1C-212ENST00000399621 NPHP1O15259 732 aa15.1■□□□□ 0.01
CACNA1C-212ENST00000399621 AMER1Q5JTC6 1135 aaPredicted RBP15.1■□□□□ 0.01
CACNA1C-212ENST00000399621 ACIN1Q9UKV3 1341 aaKnown RBP15.08■□□□□ 0
CACNA1C-212ENST00000399621 ANP32AP39687 249 aaKnown RBP15.07■□□□□ 0
CACNA1C-212ENST00000399621 ANP32BQ92688 251 aaKnown RBP15.07■□□□□ 0
CACNA1C-212ENST00000399621 CDK11BP21127 795 aaKnown RBP15.05■□□□□ -0
CACNA1C-212ENST00000399621 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.05■□□□□ -0
CACNA1C-212ENST00000399621 PPP1R15AO75807 674 aaPredicted RBP15.04■□□□□ -0
CACNA1C-212ENST00000399621 AEBP2Q6ZN18 517 aaPredicted RBP15.02■□□□□ -0
CACNA1C-212ENST00000399621 ZCCHC6Q5VYS8 1495 aaKnown RBP15.01□□□□□ -0.01
CACNA1C-212ENST00000399621 GTF3C3Q9Y5Q9 886 aa14.99□□□□□ -0.01
CACNA1C-212ENST00000399621 HSP90AA1P07900 732 aaKnown RBP14.99□□□□□ -0.01
CACNA1C-212ENST00000399621 CCDC180Q9P1Z9 1646 aa14.99□□□□□ -0.01
CACNA1C-212ENST00000399621 LMOD2Q6P5Q4 547 aa14.96□□□□□ -0.01
CACNA1C-212ENST00000399621 GLIPR1L2Q4G1C9 344 aa14.95□□□□□ -0.02
CACNA1C-212ENST00000399621 UPF2Q9HAU5 1272 aaKnown RBP14.92□□□□□ -0.02
CACNA1C-212ENST00000399621 TPRNQ4KMQ1 711 aa14.89□□□□□ -0.03
CACNA1C-212ENST00000399621 CHMP7Q8WUX9 453 aaPredicted RBP14.87□□□□□ -0.03
CACNA1C-212ENST00000399621 KCNH8Q96L42 1107 aa14.86□□□□□ -0.03
CACNA1C-212ENST00000399621 TAOK2Q9UL54 1235 aa14.81□□□□□ -0.04
CACNA1C-212ENST00000399621 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.73□□□□□ -0.05
CACNA1C-212ENST00000399621 MYO15BQ96JP2 1530 aa14.73□□□□□ -0.05
CACNA1C-212ENST00000399621 NBR1Q14596 966 aa14.72□□□□□ -0.05
CACNA1C-212ENST00000399621 TONSLQ96HA7 1378 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms