RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 DCAF8L2P0C7V8 631 aa21.46■■□□□ 1.03
CACNA1C-213ENST00000399629 SUPT5HO00267 1087 aaKnown RBP19.65■□□□□ 0.74
CACNA1C-213ENST00000399629 FAM9AQ8IZU1 332 aaPredicted RBP19.5■□□□□ 0.71
CACNA1C-213ENST00000399629 EHMT2Q96KQ7 1210 aa19.44■□□□□ 0.7
CACNA1C-213ENST00000399629 SHROOM4Q9ULL8 1493 aa19.34■□□□□ 0.69
CACNA1C-213ENST00000399629 APLP2Q06481 763 aa19.23■□□□□ 0.67
CACNA1C-213ENST00000399629 NISCHQ9Y2I1 1504 aa19.15■□□□□ 0.66
CACNA1C-213ENST00000399629 PELP1Q8IZL8 1130 aaKnown RBP18.87■□□□□ 0.61
CACNA1C-213ENST00000399629 ATP1B4Q9UN42 357 aaPredicted RBP18.8■□□□□ 0.6
CACNA1C-213ENST00000399629 RANGAP1P46060 587 aaPredicted RBP18.76■□□□□ 0.59
CACNA1C-213ENST00000399629 TTBK1Q5TCY1 1321 aaPredicted RBP18.71■□□□□ 0.59
CACNA1C-213ENST00000399629 MYT1LQ9UL68 1186 aa18.47■□□□□ 0.55
CACNA1C-213ENST00000399629 UBTFP17480 764 aaKnown RBP18.27■□□□□ 0.51
CACNA1C-213ENST00000399629 TRIM41Q8WV44 630 aa18.22■□□□□ 0.51
CACNA1C-213ENST00000399629 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.2■□□□□ 0.5
CACNA1C-213ENST00000399629 HNRNPUL2Q1KMD3 747 aaKnown RBP18.2■□□□□ 0.5
CACNA1C-213ENST00000399629 PCGF6Q9BYE7 350 aa18.19■□□□□ 0.5
CACNA1C-213ENST00000399629 ERICH6Q7L0X2 663 aa18.18■□□□□ 0.5
CACNA1C-213ENST00000399629 CCER1Q8TC90 406 aaPredicted RBP18.1■□□□□ 0.49
CACNA1C-213ENST00000399629 CHIC1Q5VXU3 224 aa18.09■□□□□ 0.49
CACNA1C-213ENST00000399629 POLR3GLQ9BT43 218 aa17.88■□□□□ 0.45
CACNA1C-213ENST00000399629 SLC4A1APQ9BWU0 796 aaKnown RBP17.85■□□□□ 0.45
CACNA1C-213ENST00000399629 NEFLP07196 543 aa17.83■□□□□ 0.45
CACNA1C-213ENST00000399629 CENPBP07199 599 aaPredicted RBP17.81■□□□□ 0.44
CACNA1C-213ENST00000399629 ITGAEP38570 1179 aa17.75■□□□□ 0.43
CACNA1C-213ENST00000399629 ZEB1P37275 1124 aaPredicted RBP17.75■□□□□ 0.43
CACNA1C-213ENST00000399629 PPARGC1BQ86YN6 1023 aaKnown RBP17.64■□□□□ 0.41
CACNA1C-213ENST00000399629 CNGB1Q14028 1251 aaPredicted RBP17.59■□□□□ 0.41
CACNA1C-213ENST00000399629 YTHDC1Q96MU7 727 aaKnown RBP17.59■□□□□ 0.41
CACNA1C-213ENST00000399629 DAXXQ9UER7 740 aaPredicted RBP17.57■□□□□ 0.4
CACNA1C-213ENST00000399629 MYT1Q01538 1121 aa17.51■□□□□ 0.39
CACNA1C-213ENST00000399629 FBLN2P98095 1184 aa17.5■□□□□ 0.39
CACNA1C-213ENST00000399629 BCANQ96GW7 911 aa17.46■□□□□ 0.39
CACNA1C-213ENST00000399629 PABPN1Q86U42 306 aaKnown RBP eCLIP17.44■□□□□ 0.38
CACNA1C-213ENST00000399629 ABCC9O60706 1549 aa17.37■□□□□ 0.37
CACNA1C-213ENST00000399629 SLC24A1O60721 1099 aa17.34■□□□□ 0.37
CACNA1C-213ENST00000399629 TRIM52Q96A61 297 aa17.32■□□□□ 0.36
CACNA1C-213ENST00000399629 FAM50AQ14320 339 aaKnown RBP17.31■□□□□ 0.36
CACNA1C-213ENST00000399629 ESF1Q9H501 851 aaKnown RBP17.25■□□□□ 0.35
CACNA1C-213ENST00000399629 CLSPNQ9HAW4 1339 aa17.24■□□□□ 0.35
CACNA1C-213ENST00000399629 PLPPR3Q6T4P5 718 aa17.23■□□□□ 0.35
CACNA1C-213ENST00000399629 ZBTB47Q9UFB7 747 aaPredicted RBP17.16■□□□□ 0.34
CACNA1C-213ENST00000399629 ZNF326Q5BKZ1 582 aaKnown RBP17.12■□□□□ 0.33
CACNA1C-213ENST00000399629 ZNF316A6NFI3 1004 aaPredicted RBP17.11■□□□□ 0.33
CACNA1C-213ENST00000399629 TRIM26Q12899 539 aaPredicted RBP17.11■□□□□ 0.33
CACNA1C-213ENST00000399629 NEFMP07197 916 aa17.07■□□□□ 0.32
CACNA1C-213ENST00000399629 NPM1P06748 294 aaKnown RBP eCLIP17.04■□□□□ 0.32
CACNA1C-213ENST00000399629 STAG3Q9UJ98 1225 aa17.04■□□□□ 0.32
CACNA1C-213ENST00000399629 ARID3CA6NKF2 412 aa17.03■□□□□ 0.32
CACNA1C-213ENST00000399629 NEUROD1Q13562 356 aa17.01■□□□□ 0.31
CACNA1C-213ENST00000399629 BCL11AQ9H165 835 aa16.99■□□□□ 0.31
CACNA1C-213ENST00000399629 ZNF777Q9ULD5 760 aaPredicted RBP16.95■□□□□ 0.3
CACNA1C-213ENST00000399629 LOC105371045A0A1W2PR82 267 aa16.93■□□□□ 0.3
CACNA1C-213ENST00000399629 CANXP27824 592 aaKnown RBP16.92■□□□□ 0.3
CACNA1C-213ENST00000399629 CHGAP10645 457 aaKnown RBP16.89■□□□□ 0.29
CACNA1C-213ENST00000399629 P3H3Q8IVL6 736 aa16.88■□□□□ 0.29
CACNA1C-213ENST00000399629 SCAF1Q9H7N4 1312 aaKnown RBP16.85■□□□□ 0.29
CACNA1C-213ENST00000399629 CDK11AQ9UQ88 783 aaPredicted RBP16.82■□□□□ 0.28
CACNA1C-213ENST00000399629 A0A0G2JS52 829 aa16.78■□□□□ 0.28
CACNA1C-213ENST00000399629 RTL5Q5HYW3 569 aaPredicted RBP16.76■□□□□ 0.27
CACNA1C-213ENST00000399629 HRCP23327 699 aa16.71■□□□□ 0.27
CACNA1C-213ENST00000399629 ANP32CO43423 234 aa16.71■□□□□ 0.26
CACNA1C-213ENST00000399629 ZBTB7CA1YPR0 619 aa16.6■□□□□ 0.25
CACNA1C-213ENST00000399629 C14orf37Q86TY3 774 aa16.59■□□□□ 0.25
CACNA1C-213ENST00000399629 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.58■□□□□ 0.25
CACNA1C-213ENST00000399629 PLEKHG5O94827 1062 aa16.58■□□□□ 0.24
CACNA1C-213ENST00000399629 NPM2Q86SE8 214 aaKnown RBP16.56■□□□□ 0.24
CACNA1C-213ENST00000399629 HAP1P54257 671 aaPredicted RBP16.55■□□□□ 0.24
CACNA1C-213ENST00000399629 ARID4BQ4LE39 1312 aaPredicted RBP16.54■□□□□ 0.24
CACNA1C-213ENST00000399629 CHMP7Q8WUX9 453 aaPredicted RBP16.54■□□□□ 0.24
CACNA1C-213ENST00000399629 DIEXFQ68CQ4 756 aaKnown RBP16.53■□□□□ 0.24
CACNA1C-213ENST00000399629 PPP1R15AO75807 674 aaPredicted RBP16.49■□□□□ 0.23
CACNA1C-213ENST00000399629 SCRIBQ14160 1630 aa16.44■□□□□ 0.22
CACNA1C-213ENST00000399629 SENP3Q9H4L4 574 aaPredicted RBP16.44■□□□□ 0.22
CACNA1C-213ENST00000399629 TRHP20396 242 aaPredicted RBP16.4■□□□□ 0.22
CACNA1C-213ENST00000399629 TSPY4P0CV99 314 aa16.37■□□□□ 0.21
CACNA1C-213ENST00000399629 TSPY10P0CW01 314 aa16.37■□□□□ 0.21
CACNA1C-213ENST00000399629 CSRNP3Q8WYN3 585 aa16.37■□□□□ 0.21
CACNA1C-213ENST00000399629 KCNH8Q96L42 1107 aa16.37■□□□□ 0.21
CACNA1C-213ENST00000399629 HSP90AA1P07900 732 aaKnown RBP16.35■□□□□ 0.21
CACNA1C-213ENST00000399629 CHIC2Q9UKJ5 165 aa16.33■□□□□ 0.2
CACNA1C-213ENST00000399629 ARXQ96QS3 562 aa16.32■□□□□ 0.2
CACNA1C-213ENST00000399629 TONSLQ96HA7 1378 aa16.31■□□□□ 0.2
CACNA1C-213ENST00000399629 CDK11BP21127 795 aaKnown RBP16.29■□□□□ 0.2
CACNA1C-213ENST00000399629 KDM2AQ9Y2K7 1162 aa16.28■□□□□ 0.2
CACNA1C-213ENST00000399629 NPHP1O15259 732 aa16.27■□□□□ 0.2
CACNA1C-213ENST00000399629 ERCC6Q03468 1493 aa16.26■□□□□ 0.19
CACNA1C-213ENST00000399629 WDR43Q15061 677 aaKnown RBP eCLIP16.26■□□□□ 0.19
CACNA1C-213ENST00000399629 UPF2Q9HAU5 1272 aaKnown RBP16.23■□□□□ 0.19
CACNA1C-213ENST00000399629 ANP32BQ92688 251 aaKnown RBP16.23■□□□□ 0.19
CACNA1C-213ENST00000399629 SALL2Q9Y467 1007 aaPredicted RBP16.22■□□□□ 0.19
CACNA1C-213ENST00000399629 LMOD2Q6P5Q4 547 aa16.22■□□□□ 0.19
CACNA1C-213ENST00000399629 ANP32AP39687 249 aaKnown RBP16.19■□□□□ 0.18
CACNA1C-213ENST00000399629 MYH16Q9H6N6 1097 aa16.19■□□□□ 0.18
CACNA1C-213ENST00000399629 MTUS2Q5JR59 1369 aa16.17■□□□□ 0.18
CACNA1C-213ENST00000399629 PLEKHD1A6NEE1 506 aa16.16■□□□□ 0.18
CACNA1C-213ENST00000399629 TMC1Q8TDI8 760 aa16.15■□□□□ 0.18
CACNA1C-213ENST00000399629 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.15■□□□□ 0.18
CACNA1C-213ENST00000399629 FAM9BQ8IZU0 186 aa16.13■□□□□ 0.17
CACNA1C-213ENST00000399629 TULP1O00294 542 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms