RNA–Protein interactions for RNA: ENST00000254286.8

ACTR10-201, Transcript of actin related protein 10 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTR10, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR10-201ENST00000254286 NISCHQ9Y2I1 1504 aa28.5■■■□□ 2.15
ACTR10-201ENST00000254286 CCDC180Q9P1Z9 1646 aa25.45■■□□□ 1.67
ACTR10-201ENST00000254286 ABCC9O60706 1549 aa24.91■■□□□ 1.58
ACTR10-201ENST00000254286 RB1CC1Q8TDY2 1594 aa24■■□□□ 1.43
ACTR10-201ENST00000254286 NACADO15069 1562 aa23.96■■□□□ 1.43
ACTR10-201ENST00000254286 MYO15BQ96JP2 1530 aa23.82■■□□□ 1.4
ACTR10-201ENST00000254286 DCAF8L2P0C7V8 631 aa23.75■■□□□ 1.39
ACTR10-201ENST00000254286 ZCCHC6Q5VYS8 1495 aaKnown RBP23.71■■□□□ 1.39
ACTR10-201ENST00000254286 HRCP23327 699 aa23.7■■□□□ 1.38
ACTR10-201ENST00000254286 PELP1Q8IZL8 1130 aaKnown RBP23.68■■□□□ 1.38
ACTR10-201ENST00000254286 DCAF1Q9Y4B6 1507 aa23.65■■□□□ 1.38
ACTR10-201ENST00000254286 SHROOM4Q9ULL8 1493 aa23.51■■□□□ 1.35
ACTR10-201ENST00000254286 UNC13AQ9UPW8 1703 aa23.41■■□□□ 1.34
ACTR10-201ENST00000254286 SUPT5HO00267 1087 aaKnown RBP23.38■■□□□ 1.33
ACTR10-201ENST00000254286 BICRAQ9NZM4 1560 aa23.23■■□□□ 1.31
ACTR10-201ENST00000254286 PABPN1Q86U42 306 aaKnown RBP eCLIP23.22■■□□□ 1.31
ACTR10-201ENST00000254286 CHIC1Q5VXU3 224 aa23.21■■□□□ 1.31
ACTR10-201ENST00000254286 SCRIBQ14160 1630 aa23.1■■□□□ 1.29
ACTR10-201ENST00000254286 PCGF6Q9BYE7 350 aa23.08■■□□□ 1.28
ACTR10-201ENST00000254286 MYT1Q01538 1121 aa23.04■■□□□ 1.28
ACTR10-201ENST00000254286 DNAJC5BQ9UF47 199 aa22.96■■□□□ 1.27
ACTR10-201ENST00000254286 PPARGC1BQ86YN6 1023 aaKnown RBP22.93■■□□□ 1.26
ACTR10-201ENST00000254286 EIF4G1Q04637 1599 aaKnown RBP22.64■■□□□ 1.22
ACTR10-201ENST00000254286 TRIM26Q12899 539 aaPredicted RBP22.61■■□□□ 1.21
ACTR10-201ENST00000254286 CC2D2AQ9P2K1 1620 aa22.57■■□□□ 1.2
ACTR10-201ENST00000254286 ZEB1P37275 1124 aaPredicted RBP22.49■■□□□ 1.19
ACTR10-201ENST00000254286 LOC105371045A0A1W2PR82 267 aa22.44■■□□□ 1.18
ACTR10-201ENST00000254286 CECR2Q9BXF3 1484 aa22.44■■□□□ 1.18
ACTR10-201ENST00000254286 SCAF1Q9H7N4 1312 aaKnown RBP22.35■■□□□ 1.17
ACTR10-201ENST00000254286 SMARCA4P51532 1647 aa22.13■■□□□ 1.13
ACTR10-201ENST00000254286 BAZ1AQ9NRL2 1556 aaPredicted RBP22.12■■□□□ 1.13
ACTR10-201ENST00000254286 NCAPD3P42695 1498 aa22.09■■□□□ 1.13
ACTR10-201ENST00000254286 SMARCA2P51531 1590 aa22.05■■□□□ 1.12
ACTR10-201ENST00000254286 ATAD2BQ9ULI0 1458 aa22.05■■□□□ 1.12
ACTR10-201ENST00000254286 HMGXB3Q12766 1538 aa21.98■■□□□ 1.11
ACTR10-201ENST00000254286 PEG3Q9GZU2 1588 aa21.98■■□□□ 1.11
ACTR10-201ENST00000254286 MROH2BQ7Z745 1585 aa21.92■■□□□ 1.1
ACTR10-201ENST00000254286 TTBK1Q5TCY1 1321 aaPredicted RBP21.88■■□□□ 1.09
ACTR10-201ENST00000254286 BAZ1BQ9UIG0 1483 aaKnown RBP21.86■■□□□ 1.09
ACTR10-201ENST00000254286 RSF1Q96T23 1441 aaPredicted RBP21.82■■□□□ 1.08
ACTR10-201ENST00000254286 ACIN1Q9UKV3 1341 aaKnown RBP21.82■■□□□ 1.08
ACTR10-201ENST00000254286 TRIM41Q8WV44 630 aa21.8■■□□□ 1.08
ACTR10-201ENST00000254286 WIZO95785 1651 aa21.67■■□□□ 1.06
ACTR10-201ENST00000254286 NEUROD1Q13562 356 aa21.66■■□□□ 1.06
ACTR10-201ENST00000254286 CENPBP07199 599 aaPredicted RBP21.58■■□□□ 1.04
ACTR10-201ENST00000254286 LAMC3Q9Y6N6 1575 aa21.54■■□□□ 1.04
ACTR10-201ENST00000254286 FAM9AQ8IZU1 332 aaPredicted RBP21.54■■□□□ 1.04
ACTR10-201ENST00000254286 ERCC6Q03468 1493 aa21.52■■□□□ 1.03
ACTR10-201ENST00000254286 GTF3C3Q9Y5Q9 886 aa21.5■■□□□ 1.03
ACTR10-201ENST00000254286 NESP48681 1621 aa21.5■■□□□ 1.03
ACTR10-201ENST00000254286 TOP2AP11388 1531 aaKnown RBP21.48■■□□□ 1.03
ACTR10-201ENST00000254286 DIEXFQ68CQ4 756 aaKnown RBP21.47■■□□□ 1.03
ACTR10-201ENST00000254286 CCER1Q8TC90 406 aaPredicted RBP21.46■■□□□ 1.03
ACTR10-201ENST00000254286 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.44■■□□□ 1.02
ACTR10-201ENST00000254286 CADPSQ9ULU8 1353 aa21.42■■□□□ 1.02
ACTR10-201ENST00000254286 CUX2O14529 1486 aa21.41■■□□□ 1.02
ACTR10-201ENST00000254286 PDS5BQ9NTI5 1447 aa21.39■■□□□ 1.01
ACTR10-201ENST00000254286 WRNQ14191 1432 aaPredicted RBP eCLIP21.34■■□□□ 1.01
ACTR10-201ENST00000254286 KIF21AQ7Z4S6 1674 aa21.28■■□□□ 1
ACTR10-201ENST00000254286 THOC2Q8NI27 1593 aaKnown RBP21.27■■□□□ 1
ACTR10-201ENST00000254286 CFTRP13569 1480 aa21.27■■□□□ 1
ACTR10-201ENST00000254286 EHMT2Q96KQ7 1210 aa21.23■□□□□ 0.99
ACTR10-201ENST00000254286 CCDC88BA6NC98 1476 aa21.2■□□□□ 0.98
ACTR10-201ENST00000254286 ZNF316A6NFI3 1004 aaPredicted RBP21.17■□□□□ 0.98
ACTR10-201ENST00000254286 FANCD2Q9BXW9 1451 aa21.16■□□□□ 0.98
ACTR10-201ENST00000254286 MRC2Q9UBG0 1479 aa21.16■□□□□ 0.98
ACTR10-201ENST00000254286 CEP164Q9UPV0 1460 aa21.15■□□□□ 0.98
ACTR10-201ENST00000254286 PRDM2Q13029 1718 aa21.13■□□□□ 0.97
ACTR10-201ENST00000254286 WDR62O43379 1518 aa21.1■□□□□ 0.97
ACTR10-201ENST00000254286 BCL11AQ9H165 835 aa21.07■□□□□ 0.96
ACTR10-201ENST00000254286 CEP162Q5TB80 1403 aa21.06■□□□□ 0.96
ACTR10-201ENST00000254286 TNIKQ9UKE5 1360 aa21.03■□□□□ 0.96
ACTR10-201ENST00000254286 EEA1Q15075 1411 aa20.94■□□□□ 0.94
ACTR10-201ENST00000254286 URB2Q14146 1524 aaKnown RBP20.93■□□□□ 0.94
ACTR10-201ENST00000254286 MIER1Q8N108 512 aa20.89■□□□□ 0.94
ACTR10-201ENST00000254286 CLSPNQ9HAW4 1339 aa20.88■□□□□ 0.93
ACTR10-201ENST00000254286 ABCC8Q09428 1581 aa20.88■□□□□ 0.93
ACTR10-201ENST00000254286 YTHDC1Q96MU7 727 aaKnown RBP20.86■□□□□ 0.93
ACTR10-201ENST00000254286 DNAJC5Q9H3Z4 198 aa20.86■□□□□ 0.93
ACTR10-201ENST00000254286 ANP32EQ9BTT0 268 aa20.83■□□□□ 0.92
ACTR10-201ENST00000254286 TOPBP1Q92547 1522 aa20.8■□□□□ 0.92
ACTR10-201ENST00000254286 DNMBPQ6XZF7 1577 aa20.79■□□□□ 0.92
ACTR10-201ENST00000254286 SOGA1O94964 1423 aa20.78■□□□□ 0.92
ACTR10-201ENST00000254286 GOLGA3Q08378 1498 aa20.77■□□□□ 0.92
ACTR10-201ENST00000254286 CSRNP3Q8WYN3 585 aa20.75■□□□□ 0.91
ACTR10-201ENST00000254286 IFT140Q96RY7 1462 aa20.74■□□□□ 0.91
ACTR10-201ENST00000254286 RUSC2Q8N2Y8 1516 aa20.64■□□□□ 0.89
ACTR10-201ENST00000254286 UBTFP17480 764 aaKnown RBP20.63■□□□□ 0.89
ACTR10-201ENST00000254286 KIF21BO75037 1637 aa20.62■□□□□ 0.89
ACTR10-201ENST00000254286 PRKCSHP14314 528 aaPredicted RBP20.62■□□□□ 0.89
ACTR10-201ENST00000254286 POLA1P09884 1462 aaPredicted RBP20.61■□□□□ 0.89
ACTR10-201ENST00000254286 SUPT16HQ9Y5B9 1047 aaKnown RBP20.59■□□□□ 0.89
ACTR10-201ENST00000254286 TARBP1Q13395 1621 aaKnown RBP20.59■□□□□ 0.89
ACTR10-201ENST00000254286 ZNF608Q9ULD9 1512 aaPredicted RBP20.58■□□□□ 0.89
ACTR10-201ENST00000254286 CUX1P39880 1505 aa20.58■□□□□ 0.88
ACTR10-201ENST00000254286 HNRNPUL2Q1KMD3 747 aaKnown RBP20.56■□□□□ 0.88
ACTR10-201ENST00000254286 VPS8Q8N3P4 1428 aa20.56■□□□□ 0.88
ACTR10-201ENST00000254286 FGD5Q6ZNL6 1462 aa20.53■□□□□ 0.88
ACTR10-201ENST00000254286 EIF4G3O43432 1585 aaKnown RBP20.53■□□□□ 0.88
ACTR10-201ENST00000254286 WDR97A6NE52 1622 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms