Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
PCDH20Q8N6Y1 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDH20Q8N6Y1 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH20Q8N6Y1 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
PCDH20Q8N6Y1 AL645728.1-201ENST00000366221 2101 ntBASIC16.9■□□□□ 0.3
PCDH20Q8N6Y1 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH20Q8N6Y1 SNX33P1-201ENST00000592116 1762 ntBASIC16.89■□□□□ 0.3
PCDH20Q8N6Y1 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PCDH20Q8N6Y1 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.3
PCDH20Q8N6Y1 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH20Q8N6Y1 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH20Q8N6Y1 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH20Q8N6Y1 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH20Q8N6Y1 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.89■□□□□ 0.29
PCDH20Q8N6Y1 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH20Q8N6Y1 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH20Q8N6Y1 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
PCDH20Q8N6Y1 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
PCDH20Q8N6Y1 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.89■□□□□ 0.29
PCDH20Q8N6Y1 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PCDH20Q8N6Y1 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH20Q8N6Y1 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PCDH20Q8N6Y1 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PCDH20Q8N6Y1 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.89■□□□□ 0.29
PCDH20Q8N6Y1 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.89■□□□□ 0.29
PCDH20Q8N6Y1 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.89■□□□□ 0.29
PCDH20Q8N6Y1 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PCDH20Q8N6Y1 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PCDH20Q8N6Y1 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.89■□□□□ 0.29
PCDH20Q8N6Y1 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
PCDH20Q8N6Y1 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.89■□□□□ 0.29
PCDH20Q8N6Y1 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDH20Q8N6Y1 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH20Q8N6Y1 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDH20Q8N6Y1 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PCDH20Q8N6Y1 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.89■□□□□ 0.29
PCDH20Q8N6Y1 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.89■□□□□ 0.29
PCDH20Q8N6Y1 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PCDH20Q8N6Y1 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH20Q8N6Y1 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH20Q8N6Y1 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH20Q8N6Y1 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH20Q8N6Y1 AL671710.1-201ENST00000610245 2349 ntBASIC16.88■□□□□ 0.29
PCDH20Q8N6Y1 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDH20Q8N6Y1 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH20Q8N6Y1 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDH20Q8N6Y1 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDH20Q8N6Y1 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.88■□□□□ 0.29
PCDH20Q8N6Y1 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH20Q8N6Y1 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.88■□□□□ 0.29
PCDH20Q8N6Y1 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH20Q8N6Y1 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDH20Q8N6Y1 LINC02199-201ENST00000506655 2702 ntBASIC16.88■□□□□ 0.29
PCDH20Q8N6Y1 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDH20Q8N6Y1 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH20Q8N6Y1 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH20Q8N6Y1 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
PCDH20Q8N6Y1 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH20Q8N6Y1 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDH20Q8N6Y1 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
PCDH20Q8N6Y1 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH20Q8N6Y1 AC079140.1-201ENST00000508039 487 ntBASIC16.88■□□□□ 0.29
PCDH20Q8N6Y1 AC243562.1-201ENST00000560672 389 ntBASIC16.88■□□□□ 0.29
PCDH20Q8N6Y1 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDH20Q8N6Y1 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH20Q8N6Y1 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH20Q8N6Y1 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH20Q8N6Y1 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH20Q8N6Y1 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH20Q8N6Y1 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDH20Q8N6Y1 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH20Q8N6Y1 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
PCDH20Q8N6Y1 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDH20Q8N6Y1 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
PCDH20Q8N6Y1 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH20Q8N6Y1 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH20Q8N6Y1 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
PCDH20Q8N6Y1 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH20Q8N6Y1 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH20Q8N6Y1 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH20Q8N6Y1 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH20Q8N6Y1 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH20Q8N6Y1 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH20Q8N6Y1 AC016027.1-202ENST00000607927 1699 ntBASIC16.88■□□□□ 0.29
PCDH20Q8N6Y1 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDH20Q8N6Y1 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PCDH20Q8N6Y1 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
PCDH20Q8N6Y1 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.87■□□□□ 0.29
PCDH20Q8N6Y1 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH20Q8N6Y1 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH20Q8N6Y1 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH20Q8N6Y1 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH20Q8N6Y1 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH20Q8N6Y1 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH20Q8N6Y1 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH20Q8N6Y1 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH20Q8N6Y1 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH20Q8N6Y1 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
PCDH20Q8N6Y1 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH20Q8N6Y1 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms