RNA–Protein interactions for RNA: ENST00000621957.4

YTHDF3-215, Transcript of YTH N6-methyladenosine RNA binding protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene YTHDF3, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YTHDF3-215ENST00000621957 NISCHQ9Y2I1 1504 aa35.05■■■■□ 3.2
YTHDF3-215ENST00000621957 CCDC180Q9P1Z9 1646 aa30.06■■■□□ 2.4
YTHDF3-215ENST00000621957 ZCCHC6Q5VYS8 1495 aaKnown RBP29.69■■■□□ 2.34
YTHDF3-215ENST00000621957 SHROOM4Q9ULL8 1493 aa29.42■■■□□ 2.3
YTHDF3-215ENST00000621957 DCAF1Q9Y4B6 1507 aa29■■■□□ 2.23
YTHDF3-215ENST00000621957 SUPT5HO00267 1087 aaKnown RBP28.91■■■□□ 2.22
YTHDF3-215ENST00000621957 DCAF8L2P0C7V8 631 aa28.58■■■□□ 2.17
YTHDF3-215ENST00000621957 CHIC1Q5VXU3 224 aa28.3■■■□□ 2.12
YTHDF3-215ENST00000621957 MYO15BQ96JP2 1530 aa28.21■■■□□ 2.11
YTHDF3-215ENST00000621957 ABCC9O60706 1549 aa28.04■■■□□ 2.08
YTHDF3-215ENST00000621957 SCRIBQ14160 1630 aa27.79■■■□□ 2.04
YTHDF3-215ENST00000621957 NACADO15069 1562 aa27.7■■■□□ 2.02
YTHDF3-215ENST00000621957 RSF1Q96T23 1441 aaPredicted RBP27.64■■■□□ 2.01
YTHDF3-215ENST00000621957 RB1CC1Q8TDY2 1594 aa27.51■■□□□ 1.99
YTHDF3-215ENST00000621957 HRCP23327 699 aa27.5■■□□□ 1.99
YTHDF3-215ENST00000621957 PCGF6Q9BYE7 350 aa27.29■■□□□ 1.96
YTHDF3-215ENST00000621957 LOC105371045A0A1W2PR82 267 aa27.24■■□□□ 1.95
YTHDF3-215ENST00000621957 MROH2BQ7Z745 1585 aa27.12■■□□□ 1.93
YTHDF3-215ENST00000621957 CECR2Q9BXF3 1484 aa27.12■■□□□ 1.93
YTHDF3-215ENST00000621957 TRIM41Q8WV44 630 aa27.12■■□□□ 1.93
YTHDF3-215ENST00000621957 TRIM26Q12899 539 aaPredicted RBP27.03■■□□□ 1.92
YTHDF3-215ENST00000621957 BAZ1AQ9NRL2 1556 aaPredicted RBP27.01■■□□□ 1.92
YTHDF3-215ENST00000621957 WIZO95785 1651 aa27■■□□□ 1.91
YTHDF3-215ENST00000621957 EIF4G1Q04637 1599 aaKnown RBP26.78■■□□□ 1.88
YTHDF3-215ENST00000621957 TOP2AP11388 1531 aaKnown RBP26.74■■□□□ 1.87
YTHDF3-215ENST00000621957 UNC13AQ9UPW8 1703 aa26.74■■□□□ 1.87
YTHDF3-215ENST00000621957 SMARCA4P51532 1647 aa26.72■■□□□ 1.87
YTHDF3-215ENST00000621957 ZEB1P37275 1124 aaPredicted RBP26.64■■□□□ 1.86
YTHDF3-215ENST00000621957 FAM9AQ8IZU1 332 aaPredicted RBP26.63■■□□□ 1.85
YTHDF3-215ENST00000621957 PPARGC1BQ86YN6 1023 aaKnown RBP26.58■■□□□ 1.85
YTHDF3-215ENST00000621957 SMARCA2P51531 1590 aa26.52■■□□□ 1.84
YTHDF3-215ENST00000621957 CCDC88BA6NC98 1476 aa26.47■■□□□ 1.83
YTHDF3-215ENST00000621957 PEG3Q9GZU2 1588 aa26.34■■□□□ 1.81
YTHDF3-215ENST00000621957 BICRAQ9NZM4 1560 aa26.32■■□□□ 1.8
YTHDF3-215ENST00000621957 ABCC8Q09428 1581 aa26.3■■□□□ 1.8
YTHDF3-215ENST00000621957 EEA1Q15075 1411 aa26.3■■□□□ 1.8
YTHDF3-215ENST00000621957 EHMT2Q96KQ7 1210 aa26.19■■□□□ 1.78
YTHDF3-215ENST00000621957 WRNQ14191 1432 aaPredicted RBP eCLIP26.19■■□□□ 1.78
YTHDF3-215ENST00000621957 TNIKQ9UKE5 1360 aa26.11■■□□□ 1.77
YTHDF3-215ENST00000621957 CEP162Q5TB80 1403 aa26.04■■□□□ 1.76
YTHDF3-215ENST00000621957 SOGA1O94964 1423 aa26.03■■□□□ 1.76
YTHDF3-215ENST00000621957 CSRNP3Q8WYN3 585 aa26■■□□□ 1.75
YTHDF3-215ENST00000621957 PABPN1Q86U42 306 aaKnown RBP eCLIP25.99■■□□□ 1.75
YTHDF3-215ENST00000621957 GOLGA3Q08378 1498 aa25.97■■□□□ 1.75
YTHDF3-215ENST00000621957 ATAD2BQ9ULI0 1458 aa25.95■■□□□ 1.75
YTHDF3-215ENST00000621957 BAZ1BQ9UIG0 1483 aaKnown RBP25.9■■□□□ 1.74
YTHDF3-215ENST00000621957 KIF21BO75037 1637 aa25.89■■□□□ 1.73
YTHDF3-215ENST00000621957 RUSC2Q8N2Y8 1516 aa25.86■■□□□ 1.73
YTHDF3-215ENST00000621957 CEP164Q9UPV0 1460 aa25.84■■□□□ 1.73
YTHDF3-215ENST00000621957 SYNJ1O43426 1573 aa25.84■■□□□ 1.73
YTHDF3-215ENST00000621957 UBTFP17480 764 aaKnown RBP25.79■■□□□ 1.72
YTHDF3-215ENST00000621957 CCER1Q8TC90 406 aaPredicted RBP25.76■■□□□ 1.71
YTHDF3-215ENST00000621957 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.68■■□□□ 1.7
YTHDF3-215ENST00000621957 TOP2BQ02880 1626 aa25.67■■□□□ 1.7
YTHDF3-215ENST00000621957 BIVM-ERCC5R4GMW8 1640 aa25.64■■□□□ 1.69
YTHDF3-215ENST00000621957 HMGXB3Q12766 1538 aa25.62■■□□□ 1.69
YTHDF3-215ENST00000621957 CLIP1P30622 1438 aa25.58■■□□□ 1.69
YTHDF3-215ENST00000621957 NCAPD3P42695 1498 aa25.54■■□□□ 1.68
YTHDF3-215ENST00000621957 VPS8Q8N3P4 1428 aa25.53■■□□□ 1.68
YTHDF3-215ENST00000621957 ERICH3Q5RHP9 1530 aa25.49■■□□□ 1.67
YTHDF3-215ENST00000621957 RAPGEF2Q9Y4G8 1499 aa25.46■■□□□ 1.67
YTHDF3-215ENST00000621957 TTBK1Q5TCY1 1321 aaPredicted RBP25.42■■□□□ 1.66
YTHDF3-215ENST00000621957 APLP2Q06481 763 aa25.36■■□□□ 1.65
YTHDF3-215ENST00000621957 PRXQ9BXM0 1461 aa25.36■■□□□ 1.65
YTHDF3-215ENST00000621957 PRDM2Q13029 1718 aa25.35■■□□□ 1.65
YTHDF3-215ENST00000621957 CFTRP13569 1480 aa25.3■■□□□ 1.64
YTHDF3-215ENST00000621957 CUX1P39880 1505 aa25.29■■□□□ 1.64
YTHDF3-215ENST00000621957 DIEXFQ68CQ4 756 aaKnown RBP25.29■■□□□ 1.64
YTHDF3-215ENST00000621957 KIF27Q86VH2 1401 aa25.25■■□□□ 1.63
YTHDF3-215ENST00000621957 SCAF1Q9H7N4 1312 aaKnown RBP25.19■■□□□ 1.62
YTHDF3-215ENST00000621957 ZNF316A6NFI3 1004 aaPredicted RBP25.18■■□□□ 1.62
YTHDF3-215ENST00000621957 ARAP1Q96P48 1450 aa25.16■■□□□ 1.62
YTHDF3-215ENST00000621957 HNRNPUL2Q1KMD3 747 aaKnown RBP25.12■■□□□ 1.61
YTHDF3-215ENST00000621957 PELP1Q8IZL8 1130 aaKnown RBP25.12■■□□□ 1.61
YTHDF3-215ENST00000621957 ACIN1Q9UKV3 1341 aaKnown RBP25.12■■□□□ 1.61
YTHDF3-215ENST00000621957 CENPBP07199 599 aaPredicted RBP25.11■■□□□ 1.61
YTHDF3-215ENST00000621957 CLSPNQ9HAW4 1339 aa25.08■■□□□ 1.61
YTHDF3-215ENST00000621957 RRBP1Q9P2E9 1410 aaKnown RBP24.97■■□□□ 1.59
YTHDF3-215ENST00000621957 CADPSQ9ULU8 1353 aa24.97■■□□□ 1.59
YTHDF3-215ENST00000621957 RANGAP1P46060 587 aaPredicted RBP24.97■■□□□ 1.59
YTHDF3-215ENST00000621957 ARHGAP35Q9NRY4 1499 aa24.94■■□□□ 1.58
YTHDF3-215ENST00000621957 NEUROD1Q13562 356 aa24.93■■□□□ 1.58
YTHDF3-215ENST00000621957 MAP3K1Q13233 1512 aa24.92■■□□□ 1.58
YTHDF3-215ENST00000621957 CUX2O14529 1486 aa24.9■■□□□ 1.58
YTHDF3-215ENST00000621957 IGF1RP08069 1367 aa24.87■■□□□ 1.57
YTHDF3-215ENST00000621957 DHX57Q6P158 1386 aaKnown RBP24.84■■□□□ 1.57
YTHDF3-215ENST00000621957 KANK4Q5T7N3 995 aaPredicted RBP24.83■■□□□ 1.57
YTHDF3-215ENST00000621957 FGD5Q6ZNL6 1462 aa24.83■■□□□ 1.57
YTHDF3-215ENST00000621957 CARMIL1Q5VZK9 1371 aa24.79■■□□□ 1.56
YTHDF3-215ENST00000621957 CCNB3Q8WWL7 1395 aa24.79■■□□□ 1.56
YTHDF3-215ENST00000621957 CC2D2AQ9P2K1 1620 aa24.78■■□□□ 1.56
YTHDF3-215ENST00000621957 TIAM1Q13009 1591 aa24.78■■□□□ 1.56
YTHDF3-215ENST00000621957 DNMBPQ6XZF7 1577 aa24.73■■□□□ 1.55
YTHDF3-215ENST00000621957 FHAD1B1AJZ9 1412 aa24.71■■□□□ 1.55
YTHDF3-215ENST00000621957 GTF3C3Q9Y5Q9 886 aa24.71■■□□□ 1.55
YTHDF3-215ENST00000621957 FANCD2Q9BXW9 1451 aa24.71■■□□□ 1.55
YTHDF3-215ENST00000621957 CFAP43Q8NDM7 1665 aa24.68■■□□□ 1.54
YTHDF3-215ENST00000621957 ABCA10Q8WWZ4 1543 aa24.65■■□□□ 1.54
YTHDF3-215ENST00000621957 CUL7Q14999 1698 aa24.65■■□□□ 1.54
YTHDF3-215ENST00000621957 MIER1Q8N108 512 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms