RNA–Protein interactions for RNA: ENST00000280557.10

DENR-201, Transcript of density regulated re-initiation and release factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DENR, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENR-201ENST00000280557 NISCHQ9Y2I1 1504 aa34.16■■■■□ 3.06
DENR-201ENST00000280557 SHROOM4Q9ULL8 1493 aa29.76■■■□□ 2.35
DENR-201ENST00000280557 DCAF8L2P0C7V8 631 aa29.69■■■□□ 2.34
DENR-201ENST00000280557 SUPT5HO00267 1087 aaKnown RBP28.85■■■□□ 2.21
DENR-201ENST00000280557 CCDC180Q9P1Z9 1646 aa28.84■■■□□ 2.21
DENR-201ENST00000280557 ZCCHC6Q5VYS8 1495 aaKnown RBP28.69■■■□□ 2.18
DENR-201ENST00000280557 ABCC9O60706 1549 aa28.26■■■□□ 2.11
DENR-201ENST00000280557 HRCP23327 699 aa28.19■■■□□ 2.1
DENR-201ENST00000280557 SCRIBQ14160 1630 aa27.75■■■□□ 2.03
DENR-201ENST00000280557 MYO15BQ96JP2 1530 aa27.63■■■□□ 2.01
DENR-201ENST00000280557 CHIC1Q5VXU3 224 aa27.58■■■□□ 2.01
DENR-201ENST00000280557 DCAF1Q9Y4B6 1507 aa27.51■■□□□ 1.99
DENR-201ENST00000280557 PPARGC1BQ86YN6 1023 aaKnown RBP27.49■■□□□ 1.99
DENR-201ENST00000280557 PCGF6Q9BYE7 350 aa27.46■■□□□ 1.99
DENR-201ENST00000280557 PELP1Q8IZL8 1130 aaKnown RBP27.42■■□□□ 1.98
DENR-201ENST00000280557 PABPN1Q86U42 306 aaKnown RBP eCLIP27.21■■□□□ 1.95
DENR-201ENST00000280557 LOC105371045A0A1W2PR82 267 aa27.11■■□□□ 1.93
DENR-201ENST00000280557 CECR2Q9BXF3 1484 aa27.11■■□□□ 1.93
DENR-201ENST00000280557 EHMT2Q96KQ7 1210 aa27.1■■□□□ 1.93
DENR-201ENST00000280557 RSF1Q96T23 1441 aaPredicted RBP27■■□□□ 1.91
DENR-201ENST00000280557 NACADO15069 1562 aa26.98■■□□□ 1.91
DENR-201ENST00000280557 FAM9AQ8IZU1 332 aaPredicted RBP26.86■■□□□ 1.89
DENR-201ENST00000280557 RB1CC1Q8TDY2 1594 aa26.81■■□□□ 1.88
DENR-201ENST00000280557 MROH2BQ7Z745 1585 aa26.78■■□□□ 1.88
DENR-201ENST00000280557 SCAF1Q9H7N4 1312 aaKnown RBP26.7■■□□□ 1.86
DENR-201ENST00000280557 TRIM26Q12899 539 aaPredicted RBP26.63■■□□□ 1.85
DENR-201ENST00000280557 WIZO95785 1651 aa26.62■■□□□ 1.85
DENR-201ENST00000280557 TRIM41Q8WV44 630 aa26.57■■□□□ 1.84
DENR-201ENST00000280557 ZEB1P37275 1124 aaPredicted RBP26.49■■□□□ 1.83
DENR-201ENST00000280557 UNC13AQ9UPW8 1703 aa26.49■■□□□ 1.83
DENR-201ENST00000280557 MYT1Q01538 1121 aa26.41■■□□□ 1.82
DENR-201ENST00000280557 BICRAQ9NZM4 1560 aa26.24■■□□□ 1.79
DENR-201ENST00000280557 BAZ1AQ9NRL2 1556 aaPredicted RBP26.19■■□□□ 1.78
DENR-201ENST00000280557 SMARCA4P51532 1647 aa26.12■■□□□ 1.77
DENR-201ENST00000280557 ACIN1Q9UKV3 1341 aaKnown RBP26.03■■□□□ 1.76
DENR-201ENST00000280557 CCDC88BA6NC98 1476 aa26.03■■□□□ 1.76
DENR-201ENST00000280557 ABCC8Q09428 1581 aa26.02■■□□□ 1.76
DENR-201ENST00000280557 TTBK1Q5TCY1 1321 aaPredicted RBP25.95■■□□□ 1.75
DENR-201ENST00000280557 NEUROD1Q13562 356 aa25.92■■□□□ 1.74
DENR-201ENST00000280557 TOP2AP11388 1531 aaKnown RBP25.85■■□□□ 1.73
DENR-201ENST00000280557 SMARCA2P51531 1590 aa25.82■■□□□ 1.72
DENR-201ENST00000280557 RANGAP1P46060 587 aaPredicted RBP25.8■■□□□ 1.72
DENR-201ENST00000280557 GTF3C3Q9Y5Q9 886 aa25.78■■□□□ 1.72
DENR-201ENST00000280557 ATAD2BQ9ULI0 1458 aa25.71■■□□□ 1.71
DENR-201ENST00000280557 CENPBP07199 599 aaPredicted RBP25.68■■□□□ 1.7
DENR-201ENST00000280557 SOGA1O94964 1423 aa25.67■■□□□ 1.7
DENR-201ENST00000280557 BAZ1BQ9UIG0 1483 aaKnown RBP25.67■■□□□ 1.7
DENR-201ENST00000280557 RUSC2Q8N2Y8 1516 aa25.65■■□□□ 1.7
DENR-201ENST00000280557 EIF4G1Q04637 1599 aaKnown RBP25.57■■□□□ 1.68
DENR-201ENST00000280557 UBTFP17480 764 aaKnown RBP25.54■■□□□ 1.68
DENR-201ENST00000280557 DIEXFQ68CQ4 756 aaKnown RBP25.5■■□□□ 1.67
DENR-201ENST00000280557 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.47■■□□□ 1.67
DENR-201ENST00000280557 DNAJC5BQ9UF47 199 aa25.44■■□□□ 1.66
DENR-201ENST00000280557 WRNQ14191 1432 aaPredicted RBP eCLIP25.4■■□□□ 1.66
DENR-201ENST00000280557 CCER1Q8TC90 406 aaPredicted RBP25.38■■□□□ 1.65
DENR-201ENST00000280557 CSRNP3Q8WYN3 585 aa25.34■■□□□ 1.65
DENR-201ENST00000280557 PEG3Q9GZU2 1588 aa25.3■■□□□ 1.64
DENR-201ENST00000280557 SYNJ1O43426 1573 aa25.3■■□□□ 1.64
DENR-201ENST00000280557 NCAPD3P42695 1498 aa25.12■■□□□ 1.61
DENR-201ENST00000280557 CEP162Q5TB80 1403 aa25.09■■□□□ 1.61
DENR-201ENST00000280557 CC2D2AQ9P2K1 1620 aa25.08■■□□□ 1.6
DENR-201ENST00000280557 YTHDC1Q96MU7 727 aaKnown RBP25.01■■□□□ 1.59
DENR-201ENST00000280557 ZNF316A6NFI3 1004 aaPredicted RBP25■■□□□ 1.59
DENR-201ENST00000280557 NESP48681 1621 aa24.98■■□□□ 1.59
DENR-201ENST00000280557 RAPGEF2Q9Y4G8 1499 aa24.97■■□□□ 1.59
DENR-201ENST00000280557 HMGXB3Q12766 1538 aa24.91■■□□□ 1.58
DENR-201ENST00000280557 CUX1P39880 1505 aa24.9■■□□□ 1.58
DENR-201ENST00000280557 TNIKQ9UKE5 1360 aa24.88■■□□□ 1.57
DENR-201ENST00000280557 CFTRP13569 1480 aa24.84■■□□□ 1.57
DENR-201ENST00000280557 GOLGA3Q08378 1498 aa24.84■■□□□ 1.57
DENR-201ENST00000280557 HNRNPUL2Q1KMD3 747 aaKnown RBP24.83■■□□□ 1.57
DENR-201ENST00000280557 CADPSQ9ULU8 1353 aa24.82■■□□□ 1.56
DENR-201ENST00000280557 MIER1Q8N108 512 aa24.82■■□□□ 1.56
DENR-201ENST00000280557 P3H3Q8IVL6 736 aa24.79■■□□□ 1.56
DENR-201ENST00000280557 TOP2BQ02880 1626 aa24.76■■□□□ 1.55
DENR-201ENST00000280557 CLIP1P30622 1438 aa24.74■■□□□ 1.55
DENR-201ENST00000280557 EEA1Q15075 1411 aa24.72■■□□□ 1.55
DENR-201ENST00000280557 CEP164Q9UPV0 1460 aa24.72■■□□□ 1.55
DENR-201ENST00000280557 CUX2O14529 1486 aa24.69■■□□□ 1.54
DENR-201ENST00000280557 ATP1B4Q9UN42 357 aaPredicted RBP24.69■■□□□ 1.54
DENR-201ENST00000280557 RAD54L2Q9Y4B4 1467 aa24.67■■□□□ 1.54
DENR-201ENST00000280557 FANCD2Q9BXW9 1451 aa24.64■■□□□ 1.54
DENR-201ENST00000280557 APLP2Q06481 763 aa24.62■■□□□ 1.53
DENR-201ENST00000280557 CLSPNQ9HAW4 1339 aa24.61■■□□□ 1.53
DENR-201ENST00000280557 BCL11AQ9H165 835 aa24.61■■□□□ 1.53
DENR-201ENST00000280557 FGD5Q6ZNL6 1462 aa24.61■■□□□ 1.53
DENR-201ENST00000280557 ANP32EQ9BTT0 268 aa24.6■■□□□ 1.53
DENR-201ENST00000280557 KIF27Q86VH2 1401 aa24.59■■□□□ 1.53
DENR-201ENST00000280557 BIVM-ERCC5R4GMW8 1640 aa24.55■■□□□ 1.52
DENR-201ENST00000280557 ITGAEP38570 1179 aa24.55■■□□□ 1.52
DENR-201ENST00000280557 KANK4Q5T7N3 995 aaPredicted RBP24.55■■□□□ 1.52
DENR-201ENST00000280557 SUPT16HQ9Y5B9 1047 aaKnown RBP24.55■■□□□ 1.52
DENR-201ENST00000280557 TDRD9Q8NDG6 1382 aaKnown RBP24.52■■□□□ 1.52
DENR-201ENST00000280557 IGF1RP08069 1367 aa24.49■■□□□ 1.51
DENR-201ENST00000280557 KIF21BO75037 1637 aa24.48■■□□□ 1.51
DENR-201ENST00000280557 TSHZ2Q9NRE2 1034 aa24.48■■□□□ 1.51
DENR-201ENST00000280557 PRXQ9BXM0 1461 aa24.45■■□□□ 1.51
DENR-201ENST00000280557 CARMIL1Q5VZK9 1371 aa24.41■■□□□ 1.5
DENR-201ENST00000280557 ARID3CA6NKF2 412 aa24.41■■□□□ 1.5
DENR-201ENST00000280557 ARAP1Q96P48 1450 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms