RNA–Protein interactions for RNA: ENST00000262805.16

PDE4C-201, Transcript of phosphodiesterase 4C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE4C, Length 2,472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-201ENST00000262805 NISCHQ9Y2I1 1504 aa34.7■■■■□ 3.14
PDE4C-201ENST00000262805 SHROOM4Q9ULL8 1493 aa29.72■■■□□ 2.35
PDE4C-201ENST00000262805 CCDC180Q9P1Z9 1646 aa29.43■■■□□ 2.3
PDE4C-201ENST00000262805 ZCCHC6Q5VYS8 1495 aaKnown RBP29.37■■■□□ 2.29
PDE4C-201ENST00000262805 SUPT5HO00267 1087 aaKnown RBP29.13■■■□□ 2.25
PDE4C-201ENST00000262805 DCAF8L2P0C7V8 631 aa28.79■■■□□ 2.2
PDE4C-201ENST00000262805 DCAF1Q9Y4B6 1507 aa28.4■■■□□ 2.14
PDE4C-201ENST00000262805 MYO15BQ96JP2 1530 aa28.34■■■□□ 2.13
PDE4C-201ENST00000262805 CHIC1Q5VXU3 224 aa28.33■■■□□ 2.13
PDE4C-201ENST00000262805 ABCC9O60706 1549 aa28.13■■■□□ 2.09
PDE4C-201ENST00000262805 SCRIBQ14160 1630 aa27.7■■■□□ 2.02
PDE4C-201ENST00000262805 LOC105371045A0A1W2PR82 267 aa27.55■■■□□ 2
PDE4C-201ENST00000262805 HRCP23327 699 aa27.52■■■□□ 2
PDE4C-201ENST00000262805 PCGF6Q9BYE7 350 aa27.52■■■□□ 2
PDE4C-201ENST00000262805 RSF1Q96T23 1441 aaPredicted RBP27.5■■□□□ 1.99
PDE4C-201ENST00000262805 NACADO15069 1562 aa27.49■■□□□ 1.99
PDE4C-201ENST00000262805 RB1CC1Q8TDY2 1594 aa27.37■■□□□ 1.97
PDE4C-201ENST00000262805 CECR2Q9BXF3 1484 aa27.14■■□□□ 1.93
PDE4C-201ENST00000262805 PPARGC1BQ86YN6 1023 aaKnown RBP27.07■■□□□ 1.92
PDE4C-201ENST00000262805 TRIM41Q8WV44 630 aa27.06■■□□□ 1.92
PDE4C-201ENST00000262805 MROH2BQ7Z745 1585 aa27.03■■□□□ 1.92
PDE4C-201ENST00000262805 FAM9AQ8IZU1 332 aaPredicted RBP26.93■■□□□ 1.9
PDE4C-201ENST00000262805 WIZO95785 1651 aa26.92■■□□□ 1.9
PDE4C-201ENST00000262805 TRIM26Q12899 539 aaPredicted RBP26.91■■□□□ 1.9
PDE4C-201ENST00000262805 EHMT2Q96KQ7 1210 aa26.76■■□□□ 1.87
PDE4C-201ENST00000262805 UNC13AQ9UPW8 1703 aa26.76■■□□□ 1.87
PDE4C-201ENST00000262805 BAZ1AQ9NRL2 1556 aaPredicted RBP26.69■■□□□ 1.86
PDE4C-201ENST00000262805 EIF4G1Q04637 1599 aaKnown RBP26.56■■□□□ 1.84
PDE4C-201ENST00000262805 BICRAQ9NZM4 1560 aa26.49■■□□□ 1.83
PDE4C-201ENST00000262805 SMARCA4P51532 1647 aa26.43■■□□□ 1.82
PDE4C-201ENST00000262805 TOP2AP11388 1531 aaKnown RBP26.41■■□□□ 1.82
PDE4C-201ENST00000262805 PABPN1Q86U42 306 aaKnown RBP eCLIP26.39■■□□□ 1.82
PDE4C-201ENST00000262805 ABCC8Q09428 1581 aa26.34■■□□□ 1.81
PDE4C-201ENST00000262805 CCDC88BA6NC98 1476 aa26.34■■□□□ 1.81
PDE4C-201ENST00000262805 SMARCA2P51531 1590 aa26.31■■□□□ 1.8
PDE4C-201ENST00000262805 ZEB1P37275 1124 aaPredicted RBP26.25■■□□□ 1.79
PDE4C-201ENST00000262805 SOGA1O94964 1423 aa26.08■■□□□ 1.77
PDE4C-201ENST00000262805 RUSC2Q8N2Y8 1516 aa25.99■■□□□ 1.75
PDE4C-201ENST00000262805 CEP162Q5TB80 1403 aa25.95■■□□□ 1.74
PDE4C-201ENST00000262805 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.92■■□□□ 1.74
PDE4C-201ENST00000262805 TTBK1Q5TCY1 1321 aaPredicted RBP25.9■■□□□ 1.74
PDE4C-201ENST00000262805 WRNQ14191 1432 aaPredicted RBP eCLIP25.89■■□□□ 1.73
PDE4C-201ENST00000262805 PEG3Q9GZU2 1588 aa25.88■■□□□ 1.73
PDE4C-201ENST00000262805 CSRNP3Q8WYN3 585 aa25.86■■□□□ 1.73
PDE4C-201ENST00000262805 TNIKQ9UKE5 1360 aa25.86■■□□□ 1.73
PDE4C-201ENST00000262805 EEA1Q15075 1411 aa25.81■■□□□ 1.72
PDE4C-201ENST00000262805 UBTFP17480 764 aaKnown RBP25.78■■□□□ 1.72
PDE4C-201ENST00000262805 CCER1Q8TC90 406 aaPredicted RBP25.78■■□□□ 1.72
PDE4C-201ENST00000262805 SYNJ1O43426 1573 aa25.75■■□□□ 1.71
PDE4C-201ENST00000262805 ATAD2BQ9ULI0 1458 aa25.73■■□□□ 1.71
PDE4C-201ENST00000262805 GOLGA3Q08378 1498 aa25.71■■□□□ 1.71
PDE4C-201ENST00000262805 BAZ1BQ9UIG0 1483 aaKnown RBP25.65■■□□□ 1.7
PDE4C-201ENST00000262805 CEP164Q9UPV0 1460 aa25.55■■□□□ 1.68
PDE4C-201ENST00000262805 KIF21BO75037 1637 aa25.54■■□□□ 1.68
PDE4C-201ENST00000262805 CC2D2AQ9P2K1 1620 aa25.49■■□□□ 1.67
PDE4C-201ENST00000262805 SCAF1Q9H7N4 1312 aaKnown RBP25.44■■□□□ 1.66
PDE4C-201ENST00000262805 CLIP1P30622 1438 aa25.44■■□□□ 1.66
PDE4C-201ENST00000262805 RAPGEF2Q9Y4G8 1499 aa25.44■■□□□ 1.66
PDE4C-201ENST00000262805 TOP2BQ02880 1626 aa25.37■■□□□ 1.65
PDE4C-201ENST00000262805 NCAPD3P42695 1498 aa25.35■■□□□ 1.65
PDE4C-201ENST00000262805 RANGAP1P46060 587 aaPredicted RBP25.35■■□□□ 1.65
PDE4C-201ENST00000262805 VPS8Q8N3P4 1428 aa25.32■■□□□ 1.64
PDE4C-201ENST00000262805 DIEXFQ68CQ4 756 aaKnown RBP25.3■■□□□ 1.64
PDE4C-201ENST00000262805 HMGXB3Q12766 1538 aa25.3■■□□□ 1.64
PDE4C-201ENST00000262805 HNRNPUL2Q1KMD3 747 aaKnown RBP25.29■■□□□ 1.64
PDE4C-201ENST00000262805 BIVM-ERCC5R4GMW8 1640 aa25.28■■□□□ 1.64
PDE4C-201ENST00000262805 DNAJC5BQ9UF47 199 aa25.2■■□□□ 1.62
PDE4C-201ENST00000262805 CUX1P39880 1505 aa25.15■■□□□ 1.62
PDE4C-201ENST00000262805 NEUROD1Q13562 356 aa25.15■■□□□ 1.62
PDE4C-201ENST00000262805 APLP2Q06481 763 aa25.14■■□□□ 1.61
PDE4C-201ENST00000262805 PRXQ9BXM0 1461 aa25.13■■□□□ 1.61
PDE4C-201ENST00000262805 ACIN1Q9UKV3 1341 aaKnown RBP25.12■■□□□ 1.61
PDE4C-201ENST00000262805 ERICH3Q5RHP9 1530 aa25.1■■□□□ 1.61
PDE4C-201ENST00000262805 ZNF316A6NFI3 1004 aaPredicted RBP25.09■■□□□ 1.61
PDE4C-201ENST00000262805 ARAP1Q96P48 1450 aa25.07■■□□□ 1.6
PDE4C-201ENST00000262805 CFTRP13569 1480 aa25.02■■□□□ 1.6
PDE4C-201ENST00000262805 KIF27Q86VH2 1401 aa24.97■■□□□ 1.59
PDE4C-201ENST00000262805 KANK4Q5T7N3 995 aaPredicted RBP24.96■■□□□ 1.59
PDE4C-201ENST00000262805 CENPBP07199 599 aaPredicted RBP24.89■■□□□ 1.58
PDE4C-201ENST00000262805 GTF3C3Q9Y5Q9 886 aa24.87■■□□□ 1.57
PDE4C-201ENST00000262805 ARHGAP35Q9NRY4 1499 aa24.83■■□□□ 1.57
PDE4C-201ENST00000262805 PRDM2Q13029 1718 aa24.83■■□□□ 1.57
PDE4C-201ENST00000262805 MIER1Q8N108 512 aa24.81■■□□□ 1.56
PDE4C-201ENST00000262805 DHX57Q6P158 1386 aaKnown RBP24.79■■□□□ 1.56
PDE4C-201ENST00000262805 CUX2O14529 1486 aa24.77■■□□□ 1.56
PDE4C-201ENST00000262805 YTHDC1Q96MU7 727 aaKnown RBP24.77■■□□□ 1.56
PDE4C-201ENST00000262805 RRBP1Q9P2E9 1410 aaKnown RBP24.74■■□□□ 1.55
PDE4C-201ENST00000262805 IGF1RP08069 1367 aa24.74■■□□□ 1.55
PDE4C-201ENST00000262805 PELP1Q8IZL8 1130 aaKnown RBP24.71■■□□□ 1.55
PDE4C-201ENST00000262805 CADPSQ9ULU8 1353 aa24.71■■□□□ 1.55
PDE4C-201ENST00000262805 FGD5Q6ZNL6 1462 aa24.68■■□□□ 1.54
PDE4C-201ENST00000262805 CLSPNQ9HAW4 1339 aa24.64■■□□□ 1.54
PDE4C-201ENST00000262805 CCNB3Q8WWL7 1395 aa24.64■■□□□ 1.53
PDE4C-201ENST00000262805 CARMIL1Q5VZK9 1371 aa24.62■■□□□ 1.53
PDE4C-201ENST00000262805 ITGAEP38570 1179 aa24.61■■□□□ 1.53
PDE4C-201ENST00000262805 LAMC3Q9Y6N6 1575 aa24.6■■□□□ 1.53
PDE4C-201ENST00000262805 TIAM1Q13009 1591 aa24.55■■□□□ 1.52
PDE4C-201ENST00000262805 NESP48681 1621 aa24.53■■□□□ 1.52
PDE4C-201ENST00000262805 FANCD2Q9BXW9 1451 aa24.5■■□□□ 1.51
PDE4C-201ENST00000262805 P3H3Q8IVL6 736 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms