Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.42■□□□□ 0.06
PSMD4P55036 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
PSMD4P55036 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.42■□□□□ 0.06
PSMD4P55036 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.42■□□□□ 0.06
PSMD4P55036 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.42■□□□□ 0.06
PSMD4P55036 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.42■□□□□ 0.06
PSMD4P55036 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.42■□□□□ 0.06
PSMD4P55036 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.42■□□□□ 0.06
PSMD4P55036 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PSMD4P55036 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.42■□□□□ 0.06
PSMD4P55036 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PSMD4P55036 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PSMD4P55036 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PSMD4P55036 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PSMD4P55036 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PSMD4P55036 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.42■□□□□ 0.06
PSMD4P55036 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PSMD4P55036 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PSMD4P55036 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PSMD4P55036 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PSMD4P55036 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PSMD4P55036 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.42■□□□□ 0.06
PSMD4P55036 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PSMD4P55036 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.42■□□□□ 0.06
PSMD4P55036 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PSMD4P55036 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
PSMD4P55036 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PSMD4P55036 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.42■□□□□ 0.06
PSMD4P55036 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.42■□□□□ 0.06
PSMD4P55036 BCAR1-209ENST00000546196 1340 ntBASIC15.42■□□□□ 0.06
PSMD4P55036 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PSMD4P55036 SNX33P1-201ENST00000592116 1762 ntBASIC15.41■□□□□ 0.06
PSMD4P55036 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PSMD4P55036 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PSMD4P55036 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.41■□□□□ 0.06
PSMD4P55036 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.41■□□□□ 0.06
PSMD4P55036 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.41■□□□□ 0.06
PSMD4P55036 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
PSMD4P55036 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PSMD4P55036 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PSMD4P55036 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.41■□□□□ 0.06
PSMD4P55036 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PSMD4P55036 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PSMD4P55036 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PSMD4P55036 AL022342.1-201ENST00000400363 863 ntBASIC15.41■□□□□ 0.06
PSMD4P55036 HMGA1P7-201ENST00000406908 502 ntBASIC15.41■□□□□ 0.06
PSMD4P55036 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.41■□□□□ 0.06
PSMD4P55036 KRT18P58-201ENST00000527480 1120 ntBASIC15.41■□□□□ 0.06
PSMD4P55036 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
PSMD4P55036 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.41■□□□□ 0.06
PSMD4P55036 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PSMD4P55036 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.41■□□□□ 0.06
PSMD4P55036 AC140113.2-201ENST00000604370 208 ntBASIC15.41■□□□□ 0.06
PSMD4P55036 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.41■□□□□ 0.06
PSMD4P55036 AC004877.2-201ENST00000623941 599 ntBASIC15.41■□□□□ 0.06
PSMD4P55036 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.41■□□□□ 0.06
PSMD4P55036 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PSMD4P55036 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PSMD4P55036 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.41■□□□□ 0.06
PSMD4P55036 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PSMD4P55036 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.41■□□□□ 0.06
PSMD4P55036 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PSMD4P55036 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PSMD4P55036 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
PSMD4P55036 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.41■□□□□ 0.06
PSMD4P55036 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PSMD4P55036 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PSMD4P55036 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PSMD4P55036 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PSMD4P55036 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.41■□□□□ 0.06
PSMD4P55036 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PSMD4P55036 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
PSMD4P55036 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PSMD4P55036 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.4■□□□□ 0.06
PSMD4P55036 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.4■□□□□ 0.06
PSMD4P55036 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PSMD4P55036 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PSMD4P55036 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PSMD4P55036 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PSMD4P55036 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PSMD4P55036 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.4■□□□□ 0.06
PSMD4P55036 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PSMD4P55036 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PSMD4P55036 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PSMD4P55036 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PSMD4P55036 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PSMD4P55036 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PSMD4P55036 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PSMD4P55036 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PSMD4P55036 RNU1-129P-201ENST00000384064 167 ntBASIC15.4■□□□□ 0.06
PSMD4P55036 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
PSMD4P55036 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.4■□□□□ 0.06
PSMD4P55036 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.4■□□□□ 0.06
PSMD4P55036 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.4■□□□□ 0.06
PSMD4P55036 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.4■□□□□ 0.06
PSMD4P55036 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.4■□□□□ 0.06
PSMD4P55036 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.4■□□□□ 0.06
PSMD4P55036 U1.21-201ENST00000580816 167 ntBASIC15.4■□□□□ 0.06
PSMD4P55036 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.4■□□□□ 0.06
PSMD4P55036 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms