Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
APOC4P55056 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
APOC4P55056 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
APOC4P55056 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
APOC4P55056 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
APOC4P55056 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
APOC4P55056 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
APOC4P55056 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC12.11□□□□□ -0.47
APOC4P55056 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
APOC4P55056 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
APOC4P55056 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
APOC4P55056 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
APOC4P55056 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
APOC4P55056 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC12.11□□□□□ -0.47
APOC4P55056 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
APOC4P55056 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
APOC4P55056 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
APOC4P55056 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
APOC4P55056 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
APOC4P55056 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
APOC4P55056 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
APOC4P55056 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC12.11□□□□□ -0.47
APOC4P55056 SYS1-203ENST00000414310 795 ntTSL 3 BASIC12.11□□□□□ -0.47
APOC4P55056 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
APOC4P55056 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
APOC4P55056 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC12.11□□□□□ -0.47
APOC4P55056 AC125807.1-201ENST00000483097 614 ntBASIC12.11□□□□□ -0.47
APOC4P55056 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC12.11□□□□□ -0.47
APOC4P55056 SLBP-205ENST00000488267 987 ntTSL 2 BASIC12.11□□□□□ -0.47
APOC4P55056 ALG1L8P-201ENST00000533887 760 ntBASIC12.11□□□□□ -0.47
APOC4P55056 AC069262.1-201ENST00000539058 672 ntBASIC12.11□□□□□ -0.47
APOC4P55056 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC12.11□□□□□ -0.47
APOC4P55056 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC12.11□□□□□ -0.47
APOC4P55056 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
APOC4P55056 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC12.11□□□□□ -0.47
APOC4P55056 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
APOC4P55056 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC12.11□□□□□ -0.47
APOC4P55056 Z92544.3-201ENST00000624747 417 ntBASIC12.11□□□□□ -0.47
APOC4P55056 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC12.11□□□□□ -0.47
APOC4P55056 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
APOC4P55056 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
APOC4P55056 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC12.11□□□□□ -0.47
APOC4P55056 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC12.11□□□□□ -0.47
APOC4P55056 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC12.11□□□□□ -0.47
APOC4P55056 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
APOC4P55056 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
APOC4P55056 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
APOC4P55056 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC12.11□□□□□ -0.47
APOC4P55056 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
APOC4P55056 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
APOC4P55056 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
APOC4P55056 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
APOC4P55056 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
APOC4P55056 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
APOC4P55056 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
APOC4P55056 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
APOC4P55056 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
APOC4P55056 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
APOC4P55056 BANP-227ENST00000626016 2144 ntTSL 2 BASIC12.1□□□□□ -0.47
APOC4P55056 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
APOC4P55056 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
APOC4P55056 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
APOC4P55056 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC12.1□□□□□ -0.47
APOC4P55056 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
APOC4P55056 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
APOC4P55056 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
APOC4P55056 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
APOC4P55056 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
APOC4P55056 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
APOC4P55056 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
APOC4P55056 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
APOC4P55056 MIR346-201ENST00000362234 95 ntBASIC12.1□□□□□ -0.47
APOC4P55056 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
APOC4P55056 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC12.1□□□□□ -0.47
APOC4P55056 HLA-H-201ENST00000383620 1096 ntBASIC12.1□□□□□ -0.47
APOC4P55056 FAM58DP-201ENST00000428076 619 ntBASIC12.1□□□□□ -0.47
APOC4P55056 KLF2P3-201ENST00000451977 1087 ntBASIC12.1□□□□□ -0.47
APOC4P55056 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC12.1□□□□□ -0.47
APOC4P55056 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC12.1□□□□□ -0.47
APOC4P55056 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC12.1□□□□□ -0.47
APOC4P55056 AC026150.2-201ENST00000564693 1156 ntBASIC12.1□□□□□ -0.47
APOC4P55056 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC12.1□□□□□ -0.47
APOC4P55056 AC073389.1-201ENST00000595595 795 ntBASIC12.1□□□□□ -0.47
APOC4P55056 AC093512.1-201ENST00000617969 520 ntBASIC12.1□□□□□ -0.47
APOC4P55056 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
APOC4P55056 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC12.1□□□□□ -0.47
APOC4P55056 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
APOC4P55056 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
APOC4P55056 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
APOC4P55056 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
APOC4P55056 PC-204ENST00000524491 1714 ntTSL 2 BASIC12.1□□□□□ -0.47
APOC4P55056 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC12.1□□□□□ -0.47
APOC4P55056 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC12.1□□□□□ -0.47
APOC4P55056 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
APOC4P55056 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
APOC4P55056 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
APOC4P55056 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
APOC4P55056 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
APOC4P55056 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
APOC4P55056 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms