RNA–Protein interactions for RNA: ENST00000521591.5

TNIP1-211, Transcript of TNFAIP3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNIP1, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-211ENST00000521591 NISCHQ9Y2I1 1504 aa37■■■■□ 3.51
TNIP1-211ENST00000521591 CCDC180Q9P1Z9 1646 aa31.89■■■□□ 2.7
TNIP1-211ENST00000521591 ZCCHC6Q5VYS8 1495 aaKnown RBP31.21■■■□□ 2.59
TNIP1-211ENST00000521591 SHROOM4Q9ULL8 1493 aa30.97■■■□□ 2.55
TNIP1-211ENST00000521591 DCAF1Q9Y4B6 1507 aa30.55■■■□□ 2.48
TNIP1-211ENST00000521591 DCAF8L2P0C7V8 631 aa30.45■■■□□ 2.47
TNIP1-211ENST00000521591 SUPT5HO00267 1087 aaKnown RBP30.37■■■□□ 2.45
TNIP1-211ENST00000521591 MYO15BQ96JP2 1530 aa29.92■■■□□ 2.38
TNIP1-211ENST00000521591 CHIC1Q5VXU3 224 aa29.68■■■□□ 2.34
TNIP1-211ENST00000521591 ABCC9O60706 1549 aa29.64■■■□□ 2.34
TNIP1-211ENST00000521591 NACADO15069 1562 aa29.56■■■□□ 2.32
TNIP1-211ENST00000521591 SCRIBQ14160 1630 aa29.51■■■□□ 2.31
TNIP1-211ENST00000521591 RB1CC1Q8TDY2 1594 aa29.15■■■□□ 2.26
TNIP1-211ENST00000521591 RSF1Q96T23 1441 aaPredicted RBP29.05■■■□□ 2.24
TNIP1-211ENST00000521591 CECR2Q9BXF3 1484 aa28.74■■■□□ 2.19
TNIP1-211ENST00000521591 HRCP23327 699 aa28.68■■■□□ 2.18
TNIP1-211ENST00000521591 MROH2BQ7Z745 1585 aa28.64■■■□□ 2.18
TNIP1-211ENST00000521591 UNC13AQ9UPW8 1703 aa28.63■■■□□ 2.17
TNIP1-211ENST00000521591 LOC105371045A0A1W2PR82 267 aa28.63■■■□□ 2.17
TNIP1-211ENST00000521591 PCGF6Q9BYE7 350 aa28.55■■■□□ 2.16
TNIP1-211ENST00000521591 BAZ1AQ9NRL2 1556 aaPredicted RBP28.51■■■□□ 2.15
TNIP1-211ENST00000521591 WIZO95785 1651 aa28.45■■■□□ 2.15
TNIP1-211ENST00000521591 TRIM41Q8WV44 630 aa28.44■■■□□ 2.14
TNIP1-211ENST00000521591 SMARCA4P51532 1647 aa28.3■■■□□ 2.12
TNIP1-211ENST00000521591 BICRAQ9NZM4 1560 aa28.29■■■□□ 2.12
TNIP1-211ENST00000521591 TRIM26Q12899 539 aaPredicted RBP28.22■■■□□ 2.11
TNIP1-211ENST00000521591 PABPN1Q86U42 306 aaKnown RBP eCLIP28.13■■■□□ 2.09
TNIP1-211ENST00000521591 TOP2AP11388 1531 aaKnown RBP28.13■■■□□ 2.09
TNIP1-211ENST00000521591 EIF4G1Q04637 1599 aaKnown RBP28.1■■■□□ 2.09
TNIP1-211ENST00000521591 FAM9AQ8IZU1 332 aaPredicted RBP27.99■■■□□ 2.07
TNIP1-211ENST00000521591 SMARCA2P51531 1590 aa27.91■■■□□ 2.06
TNIP1-211ENST00000521591 PEG3Q9GZU2 1588 aa27.9■■■□□ 2.06
TNIP1-211ENST00000521591 CCDC88BA6NC98 1476 aa27.89■■■□□ 2.06
TNIP1-211ENST00000521591 PPARGC1BQ86YN6 1023 aaKnown RBP27.85■■■□□ 2.05
TNIP1-211ENST00000521591 ZEB1P37275 1124 aaPredicted RBP27.69■■■□□ 2.02
TNIP1-211ENST00000521591 ATAD2BQ9ULI0 1458 aa27.67■■■□□ 2.02
TNIP1-211ENST00000521591 ABCC8Q09428 1581 aa27.64■■■□□ 2.02
TNIP1-211ENST00000521591 EHMT2Q96KQ7 1210 aa27.59■■■□□ 2.01
TNIP1-211ENST00000521591 BAZ1BQ9UIG0 1483 aaKnown RBP27.56■■■□□ 2
TNIP1-211ENST00000521591 EEA1Q15075 1411 aa27.49■■□□□ 1.99
TNIP1-211ENST00000521591 WRNQ14191 1432 aaPredicted RBP eCLIP27.39■■□□□ 1.98
TNIP1-211ENST00000521591 SOGA1O94964 1423 aa27.38■■□□□ 1.97
TNIP1-211ENST00000521591 TNIKQ9UKE5 1360 aa27.34■■□□□ 1.97
TNIP1-211ENST00000521591 HMGXB3Q12766 1538 aa27.3■■□□□ 1.96
TNIP1-211ENST00000521591 NCAPD3P42695 1498 aa27.3■■□□□ 1.96
TNIP1-211ENST00000521591 CEP162Q5TB80 1403 aa27.29■■□□□ 1.96
TNIP1-211ENST00000521591 CSRNP3Q8WYN3 585 aa27.28■■□□□ 1.96
TNIP1-211ENST00000521591 RUSC2Q8N2Y8 1516 aa27.21■■□□□ 1.95
TNIP1-211ENST00000521591 GOLGA3Q08378 1498 aa27.19■■□□□ 1.94
TNIP1-211ENST00000521591 SYNJ1O43426 1573 aa27.14■■□□□ 1.94
TNIP1-211ENST00000521591 KIF21BO75037 1637 aa27.07■■□□□ 1.92
TNIP1-211ENST00000521591 CEP164Q9UPV0 1460 aa27.06■■□□□ 1.92
TNIP1-211ENST00000521591 UBTFP17480 764 aaKnown RBP27.05■■□□□ 1.92
TNIP1-211ENST00000521591 TOP2BQ02880 1626 aa26.95■■□□□ 1.9
TNIP1-211ENST00000521591 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.92■■□□□ 1.9
TNIP1-211ENST00000521591 CCER1Q8TC90 406 aaPredicted RBP26.91■■□□□ 1.9
TNIP1-211ENST00000521591 CFTRP13569 1480 aa26.9■■□□□ 1.9
TNIP1-211ENST00000521591 BIVM-ERCC5R4GMW8 1640 aa26.89■■□□□ 1.9
TNIP1-211ENST00000521591 CC2D2AQ9P2K1 1620 aa26.81■■□□□ 1.88
TNIP1-211ENST00000521591 CLIP1P30622 1438 aa26.81■■□□□ 1.88
TNIP1-211ENST00000521591 PRDM2Q13029 1718 aa26.77■■□□□ 1.88
TNIP1-211ENST00000521591 RAPGEF2Q9Y4G8 1499 aa26.76■■□□□ 1.87
TNIP1-211ENST00000521591 VPS8Q8N3P4 1428 aa26.74■■□□□ 1.87
TNIP1-211ENST00000521591 TTBK1Q5TCY1 1321 aaPredicted RBP26.73■■□□□ 1.87
TNIP1-211ENST00000521591 CUX1P39880 1505 aa26.73■■□□□ 1.87
TNIP1-211ENST00000521591 ERICH3Q5RHP9 1530 aa26.68■■□□□ 1.86
TNIP1-211ENST00000521591 CADPSQ9ULU8 1353 aa26.67■■□□□ 1.86
TNIP1-211ENST00000521591 PRXQ9BXM0 1461 aa26.62■■□□□ 1.85
TNIP1-211ENST00000521591 KIF27Q86VH2 1401 aa26.51■■□□□ 1.83
TNIP1-211ENST00000521591 APLP2Q06481 763 aa26.51■■□□□ 1.83
TNIP1-211ENST00000521591 ARAP1Q96P48 1450 aa26.4■■□□□ 1.82
TNIP1-211ENST00000521591 FANCD2Q9BXW9 1451 aa26.38■■□□□ 1.81
TNIP1-211ENST00000521591 DIEXFQ68CQ4 756 aaKnown RBP26.38■■□□□ 1.81
TNIP1-211ENST00000521591 HNRNPUL2Q1KMD3 747 aaKnown RBP26.35■■□□□ 1.81
TNIP1-211ENST00000521591 FGD5Q6ZNL6 1462 aa26.33■■□□□ 1.81
TNIP1-211ENST00000521591 CUX2O14529 1486 aa26.3■■□□□ 1.8
TNIP1-211ENST00000521591 RANGAP1P46060 587 aaPredicted RBP26.3■■□□□ 1.8
TNIP1-211ENST00000521591 ZNF316A6NFI3 1004 aaPredicted RBP26.27■■□□□ 1.8
TNIP1-211ENST00000521591 SCAF1Q9H7N4 1312 aaKnown RBP26.26■■□□□ 1.79
TNIP1-211ENST00000521591 NESP48681 1621 aa26.25■■□□□ 1.79
TNIP1-211ENST00000521591 DNMBPQ6XZF7 1577 aa26.25■■□□□ 1.79
TNIP1-211ENST00000521591 LAMC3Q9Y6N6 1575 aa26.25■■□□□ 1.79
TNIP1-211ENST00000521591 IGF1RP08069 1367 aa26.22■■□□□ 1.79
TNIP1-211ENST00000521591 ARHGAP35Q9NRY4 1499 aa26.19■■□□□ 1.78
TNIP1-211ENST00000521591 TOPBP1Q92547 1522 aa26.17■■□□□ 1.78
TNIP1-211ENST00000521591 CLSPNQ9HAW4 1339 aa26.15■■□□□ 1.78
TNIP1-211ENST00000521591 ACIN1Q9UKV3 1341 aaKnown RBP26.15■■□□□ 1.78
TNIP1-211ENST00000521591 RRBP1Q9P2E9 1410 aaKnown RBP26.15■■□□□ 1.78
TNIP1-211ENST00000521591 KANK4Q5T7N3 995 aaPredicted RBP26.12■■□□□ 1.77
TNIP1-211ENST00000521591 POLA1P09884 1462 aaPredicted RBP26.11■■□□□ 1.77
TNIP1-211ENST00000521591 CARMIL1Q5VZK9 1371 aa26.1■■□□□ 1.77
TNIP1-211ENST00000521591 ABCA10Q8WWZ4 1543 aa26.09■■□□□ 1.77
TNIP1-211ENST00000521591 CENPBP07199 599 aaPredicted RBP26.07■■□□□ 1.76
TNIP1-211ENST00000521591 RAD54L2Q9Y4B4 1467 aa26.05■■□□□ 1.76
TNIP1-211ENST00000521591 MAP3K1Q13233 1512 aa26.05■■□□□ 1.76
TNIP1-211ENST00000521591 PDS5BQ9NTI5 1447 aa26.05■■□□□ 1.76
TNIP1-211ENST00000521591 NEUROD1Q13562 356 aa26.03■■□□□ 1.76
TNIP1-211ENST00000521591 DHX57Q6P158 1386 aaKnown RBP26.02■■□□□ 1.76
TNIP1-211ENST00000521591 URB2Q14146 1524 aaKnown RBP26.01■■□□□ 1.76
TNIP1-211ENST00000521591 DNAJC5BQ9UF47 199 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms