Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
UBL4AP11441 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.44■□□□□ 0.06
UBL4AP11441 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.44■□□□□ 0.06
UBL4AP11441 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.44■□□□□ 0.06
UBL4AP11441 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.44■□□□□ 0.06
UBL4AP11441 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.44■□□□□ 0.06
UBL4AP11441 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
UBL4AP11441 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.44■□□□□ 0.06
UBL4AP11441 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.44■□□□□ 0.06
UBL4AP11441 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.44■□□□□ 0.06
UBL4AP11441 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.44■□□□□ 0.06
UBL4AP11441 AC005412.3-201ENST00000580309 715 ntBASIC15.44■□□□□ 0.06
UBL4AP11441 AC010654.1-201ENST00000615722 808 ntBASIC15.44■□□□□ 0.06
UBL4AP11441 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.44■□□□□ 0.06
UBL4AP11441 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.44■□□□□ 0.06
UBL4AP11441 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.44■□□□□ 0.06
UBL4AP11441 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
UBL4AP11441 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
UBL4AP11441 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.44■□□□□ 0.06
UBL4AP11441 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.44■□□□□ 0.06
UBL4AP11441 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
UBL4AP11441 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
UBL4AP11441 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
UBL4AP11441 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
UBL4AP11441 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
UBL4AP11441 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
UBL4AP11441 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
UBL4AP11441 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.44■□□□□ 0.06
UBL4AP11441 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.44■□□□□ 0.06
UBL4AP11441 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
UBL4AP11441 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
UBL4AP11441 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
UBL4AP11441 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
UBL4AP11441 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
UBL4AP11441 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
UBL4AP11441 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.43■□□□□ 0.06
UBL4AP11441 HLA-A-201ENST00000376802 1334 ntBASIC15.43■□□□□ 0.06
UBL4AP11441 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.43■□□□□ 0.06
UBL4AP11441 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.43■□□□□ 0.06
UBL4AP11441 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UBL4AP11441 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.43■□□□□ 0.06
UBL4AP11441 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.43■□□□□ 0.06
UBL4AP11441 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
UBL4AP11441 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UBL4AP11441 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.43■□□□□ 0.06
UBL4AP11441 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.43■□□□□ 0.06
UBL4AP11441 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UBL4AP11441 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UBL4AP11441 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
UBL4AP11441 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UBL4AP11441 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
UBL4AP11441 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
UBL4AP11441 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UBL4AP11441 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
UBL4AP11441 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
UBL4AP11441 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.43■□□□□ 0.06
UBL4AP11441 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.43■□□□□ 0.06
UBL4AP11441 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.43■□□□□ 0.06
UBL4AP11441 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
UBL4AP11441 AL121894.2-201ENST00000602977 491 ntBASIC15.43■□□□□ 0.06
UBL4AP11441 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.43■□□□□ 0.06
UBL4AP11441 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
UBL4AP11441 AL353732.1-201ENST00000569618 1459 ntBASIC15.43■□□□□ 0.06
UBL4AP11441 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.43■□□□□ 0.06
UBL4AP11441 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.43■□□□□ 0.06
UBL4AP11441 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
UBL4AP11441 HLA-A-202ENST00000376806 1854 ntBASIC15.43■□□□□ 0.06
UBL4AP11441 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.43■□□□□ 0.06
UBL4AP11441 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.43■□□□□ 0.06
UBL4AP11441 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UBL4AP11441 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.43■□□□□ 0.06
UBL4AP11441 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.43■□□□□ 0.06
UBL4AP11441 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.43■□□□□ 0.06
UBL4AP11441 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.43■□□□□ 0.06
UBL4AP11441 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
UBL4AP11441 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
UBL4AP11441 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
UBL4AP11441 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
UBL4AP11441 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
UBL4AP11441 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UBL4AP11441 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
UBL4AP11441 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
UBL4AP11441 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UBL4AP11441 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UBL4AP11441 AC131009.4-201ENST00000624048 1740 ntBASIC15.43■□□□□ 0.06
UBL4AP11441 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
UBL4AP11441 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.43■□□□□ 0.06
UBL4AP11441 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UBL4AP11441 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.42■□□□□ 0.06
UBL4AP11441 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
UBL4AP11441 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.42■□□□□ 0.06
UBL4AP11441 PCDHA14-201ENST00000506751 2298 ntBASIC15.42■□□□□ 0.06
UBL4AP11441 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.42■□□□□ 0.06
UBL4AP11441 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UBL4AP11441 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.42■□□□□ 0.06
UBL4AP11441 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
UBL4AP11441 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
UBL4AP11441 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
UBL4AP11441 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
UBL4AP11441 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms