RNA–Protein interactions for RNA: ENST00000600229.5

CRB3-204, Transcript of crumbs 3, cell polarity complex component, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CRB3, Length 1,078 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRB3-204ENST00000600229 NISCHQ9Y2I1 1504 aa42.08■■■■■ 4.33
CRB3-204ENST00000600229 CCDC180Q9P1Z9 1646 aa37.54■■■■□ 3.6
CRB3-204ENST00000600229 ABCC9O60706 1549 aa36.7■■■■□ 3.47
CRB3-204ENST00000600229 RB1CC1Q8TDY2 1594 aa35.31■■■■□ 3.24
CRB3-204ENST00000600229 NACADO15069 1562 aa35.25■■■■□ 3.23
CRB3-204ENST00000600229 ZCCHC6Q5VYS8 1495 aaKnown RBP35.09■■■■□ 3.21
CRB3-204ENST00000600229 MYO15BQ96JP2 1530 aa35.05■■■■□ 3.2
CRB3-204ENST00000600229 DCAF8L2P0C7V8 631 aa34.95■■■■□ 3.19
CRB3-204ENST00000600229 DCAF1Q9Y4B6 1507 aa34.86■■■■□ 3.17
CRB3-204ENST00000600229 UNC13AQ9UPW8 1703 aa34.61■■■■□ 3.13
CRB3-204ENST00000600229 BICRAQ9NZM4 1560 aa34.3■■■■□ 3.08
CRB3-204ENST00000600229 PABPN1Q86U42 306 aaKnown RBP eCLIP34.2■■■■□ 3.07
CRB3-204ENST00000600229 SCRIBQ14160 1630 aa34.19■■■■□ 3.06
CRB3-204ENST00000600229 SHROOM4Q9ULL8 1493 aa33.94■■■■□ 3.02
CRB3-204ENST00000600229 DNAJC5BQ9UF47 199 aa33.74■■■□□ 2.99
CRB3-204ENST00000600229 EIF4G1Q04637 1599 aaKnown RBP33.38■■■□□ 2.93
CRB3-204ENST00000600229 CC2D2AQ9P2K1 1620 aa33.25■■■□□ 2.91
CRB3-204ENST00000600229 CECR2Q9BXF3 1484 aa33■■■□□ 2.87
CRB3-204ENST00000600229 SMARCA4P51532 1647 aa32.72■■■□□ 2.83
CRB3-204ENST00000600229 BAZ1AQ9NRL2 1556 aaPredicted RBP32.62■■■□□ 2.81
CRB3-204ENST00000600229 ATAD2BQ9ULI0 1458 aa32.51■■■□□ 2.79
CRB3-204ENST00000600229 NCAPD3P42695 1498 aa32.5■■■□□ 2.79
CRB3-204ENST00000600229 SMARCA2P51531 1590 aa32.49■■■□□ 2.79
CRB3-204ENST00000600229 MROH2BQ7Z745 1585 aa32.43■■■□□ 2.78
CRB3-204ENST00000600229 PEG3Q9GZU2 1588 aa32.42■■■□□ 2.78
CRB3-204ENST00000600229 HMGXB3Q12766 1538 aa32.41■■■□□ 2.78
CRB3-204ENST00000600229 BAZ1BQ9UIG0 1483 aaKnown RBP32.23■■■□□ 2.75
CRB3-204ENST00000600229 WIZO95785 1651 aa32.08■■■□□ 2.73
CRB3-204ENST00000600229 RSF1Q96T23 1441 aaPredicted RBP31.99■■■□□ 2.71
CRB3-204ENST00000600229 TOP2AP11388 1531 aaKnown RBP31.76■■■□□ 2.68
CRB3-204ENST00000600229 NESP48681 1621 aa31.76■■■□□ 2.67
CRB3-204ENST00000600229 LAMC3Q9Y6N6 1575 aa31.7■■■□□ 2.67
CRB3-204ENST00000600229 ERCC6Q03468 1493 aa31.63■■■□□ 2.65
CRB3-204ENST00000600229 CADPSQ9ULU8 1353 aa31.51■■■□□ 2.63
CRB3-204ENST00000600229 KIF21AQ7Z4S6 1674 aa31.45■■■□□ 2.63
CRB3-204ENST00000600229 PDS5BQ9NTI5 1447 aa31.41■■■□□ 2.62
CRB3-204ENST00000600229 THOC2Q8NI27 1593 aaKnown RBP31.4■■■□□ 2.62
CRB3-204ENST00000600229 CUX2O14529 1486 aa31.4■■■□□ 2.62
CRB3-204ENST00000600229 CFTRP13569 1480 aa31.35■■■□□ 2.61
CRB3-204ENST00000600229 CCDC88BA6NC98 1476 aa31.32■■■□□ 2.6
CRB3-204ENST00000600229 PRDM2Q13029 1718 aa31.22■■■□□ 2.59
CRB3-204ENST00000600229 FANCD2Q9BXW9 1451 aa31.19■■■□□ 2.58
CRB3-204ENST00000600229 CEP164Q9UPV0 1460 aa31.17■■■□□ 2.58
CRB3-204ENST00000600229 MRC2Q9UBG0 1479 aa31.15■■■□□ 2.58
CRB3-204ENST00000600229 WDR62O43379 1518 aa31.1■■■□□ 2.57
CRB3-204ENST00000600229 SUPT5HO00267 1087 aaKnown RBP30.94■■■□□ 2.54
CRB3-204ENST00000600229 URB2Q14146 1524 aaKnown RBP30.92■■■□□ 2.54
CRB3-204ENST00000600229 TOPBP1Q92547 1522 aa30.7■■■□□ 2.51
CRB3-204ENST00000600229 DNMBPQ6XZF7 1577 aa30.67■■■□□ 2.5
CRB3-204ENST00000600229 ABCC8Q09428 1581 aa30.64■■■□□ 2.5
CRB3-204ENST00000600229 IFT140Q96RY7 1462 aa30.51■■■□□ 2.48
CRB3-204ENST00000600229 CUX1P39880 1505 aa30.44■■■□□ 2.46
CRB3-204ENST00000600229 DNAJC5Q9H3Z4 198 aa30.44■■■□□ 2.46
CRB3-204ENST00000600229 POLA1P09884 1462 aaPredicted RBP30.44■■■□□ 2.46
CRB3-204ENST00000600229 TARBP1Q13395 1621 aaKnown RBP30.41■■■□□ 2.46
CRB3-204ENST00000600229 ZNF608Q9ULD9 1512 aaPredicted RBP30.39■■■□□ 2.46
CRB3-204ENST00000600229 EIF4G3O43432 1585 aaKnown RBP30.33■■■□□ 2.45
CRB3-204ENST00000600229 FGD5Q6ZNL6 1462 aa30.33■■■□□ 2.45
CRB3-204ENST00000600229 RAD54L2Q9Y4B4 1467 aa30.26■■■□□ 2.44
CRB3-204ENST00000600229 SOGA1O94964 1423 aa30.22■■■□□ 2.43
CRB3-204ENST00000600229 WDR97A6NE52 1622 aa30.2■■■□□ 2.43
CRB3-204ENST00000600229 BIVM-ERCC5R4GMW8 1640 aa30.19■■■□□ 2.42
CRB3-204ENST00000600229 TOP2BQ02880 1626 aa30.16■■■□□ 2.42
CRB3-204ENST00000600229 SYNJ1O43426 1573 aa30.15■■■□□ 2.42
CRB3-204ENST00000600229 WRNQ14191 1432 aaPredicted RBP eCLIP30.15■■■□□ 2.42
CRB3-204ENST00000600229 AQRO60306 1485 aaKnown RBP eCLIP30.15■■■□□ 2.429e-8■■■■■ 30.5
CRB3-204ENST00000600229 TDRD9Q8NDG6 1382 aaKnown RBP30.06■■■□□ 2.4
CRB3-204ENST00000600229 ABCA10Q8WWZ4 1543 aa30.05■■■□□ 2.4
CRB3-204ENST00000600229 ABCA5Q8WWZ7 1642 aa30■■■□□ 2.39
CRB3-204ENST00000600229 CHD1O14646 1710 aa29.97■■■□□ 2.39
CRB3-204ENST00000600229 PBRM1Q86U86 1689 aa29.96■■■□□ 2.39
CRB3-204ENST00000600229 GRIN2BQ13224 1484 aa29.93■■■□□ 2.38
CRB3-204ENST00000600229 SNAPC4Q5SXM2 1469 aa29.93■■■□□ 2.38
CRB3-204ENST00000600229 OSCARQ8IYS5 282 aa29.93■■■□□ 2.38
CRB3-204ENST00000600229 GAPVD1Q14C86 1478 aa29.92■■■□□ 2.38
CRB3-204ENST00000600229 MAGI1Q96QZ7 1491 aaPredicted RBP29.9■■■□□ 2.38
CRB3-204ENST00000600229 SYNJ2O15056 1496 aa29.77■■■□□ 2.36
CRB3-204ENST00000600229 ADAMTS12P58397 1594 aa29.72■■■□□ 2.35
CRB3-204ENST00000600229 FBLN2P98095 1184 aa29.7■■■□□ 2.35
CRB3-204ENST00000600229 ERICH3Q5RHP9 1530 aa29.69■■■□□ 2.34
CRB3-204ENST00000600229 CLASP1Q7Z460 1538 aa29.65■■■□□ 2.34
CRB3-204ENST00000600229 CHMP7Q8WUX9 453 aaPredicted RBP29.63■■■□□ 2.33
CRB3-204ENST00000600229 RIMBP3CA6NJZ7 1639 aa29.63■■■□□ 2.33
CRB3-204ENST00000600229 RIMBP3BA6NNM3 1639 aa29.63■■■□□ 2.33
CRB3-204ENST00000600229 RIMBP3Q9UFD9 1639 aa29.63■■■□□ 2.33
CRB3-204ENST00000600229 ARHGEF11O15085 1522 aa29.6■■■□□ 2.33
CRB3-204ENST00000600229 GRIN2AQ12879 1464 aa29.57■■■□□ 2.32
CRB3-204ENST00000600229 FHAD1B1AJZ9 1412 aa29.57■■■□□ 2.32
CRB3-204ENST00000600229 KIF27Q86VH2 1401 aa29.51■■■□□ 2.31
CRB3-204ENST00000600229 CEP170Q5SW79 1584 aa29.47■■■□□ 2.31
CRB3-204ENST00000600229 NUP160Q12769 1436 aa29.46■■■□□ 2.31
CRB3-204ENST00000600229 CUL7Q14999 1698 aa29.43■■■□□ 2.3
CRB3-204ENST00000600229 IGF1RP08069 1367 aa29.39■■■□□ 2.29
CRB3-204ENST00000600229 ARAP1Q96P48 1450 aa29.36■■■□□ 2.29
CRB3-204ENST00000600229 TRIM41Q8WV44 630 aa29.35■■■□□ 2.29
CRB3-204ENST00000600229 SHROOM2Q13796 1616 aa29.3■■■□□ 2.28
CRB3-204ENST00000600229 RUSC2Q8N2Y8 1516 aa29.29■■■□□ 2.28
CRB3-204ENST00000600229 CARMIL1Q5VZK9 1371 aa29.21■■■□□ 2.27
CRB3-204ENST00000600229 ERCC6L2Q5T890 1561 aa29.2■■■□□ 2.26
CRB3-204ENST00000600229 CYB5RLQ6IPT4 315 aa29.17■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms