Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT9P35527 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT9P35527 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.26■□□□□ 0.51
KRT9P35527 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT9P35527 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC18.26■□□□□ 0.51
KRT9P35527 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.26■□□□□ 0.51
KRT9P35527 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.26■□□□□ 0.51
KRT9P35527 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
KRT9P35527 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.26■□□□□ 0.51
KRT9P35527 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
KRT9P35527 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
KRT9P35527 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT9P35527 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
KRT9P35527 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.26■□□□□ 0.51
KRT9P35527 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.26■□□□□ 0.51
KRT9P35527 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.26■□□□□ 0.51
KRT9P35527 MTDHP4-201ENST00000600287 670 ntBASIC18.26■□□□□ 0.51
KRT9P35527 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
KRT9P35527 AL589182.2-201ENST00000619332 1049 ntBASIC18.26■□□□□ 0.51
KRT9P35527 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
KRT9P35527 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
KRT9P35527 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT9P35527 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
KRT9P35527 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
KRT9P35527 AL596087.1-201ENST00000400979 1969 ntBASIC18.26■□□□□ 0.51
KRT9P35527 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.26■□□□□ 0.51
KRT9P35527 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
KRT9P35527 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT9P35527 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT9P35527 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT9P35527 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT9P35527 AL671710.1-201ENST00000610245 2349 ntBASIC18.26■□□□□ 0.51
KRT9P35527 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC18.26■□□□□ 0.51
KRT9P35527 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT9P35527 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT9P35527 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
KRT9P35527 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT9P35527 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.25■□□□□ 0.51
KRT9P35527 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
KRT9P35527 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
KRT9P35527 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
KRT9P35527 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC18.25■□□□□ 0.51
KRT9P35527 GGT3P-204ENST00000453783 1664 ntBASIC18.25■□□□□ 0.51
KRT9P35527 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
KRT9P35527 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT9P35527 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT9P35527 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
KRT9P35527 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT9P35527 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.25■□□□□ 0.51
KRT9P35527 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT9P35527 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.25■□□□□ 0.51
KRT9P35527 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.25■□□□□ 0.51
KRT9P35527 UNC93B7-201ENST00000509439 705 ntBASIC18.25■□□□□ 0.51
KRT9P35527 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT9P35527 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
KRT9P35527 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.25■□□□□ 0.51
KRT9P35527 AL353135.1-201ENST00000606729 504 ntBASIC18.25■□□□□ 0.51
KRT9P35527 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT9P35527 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
KRT9P35527 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT9P35527 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC18.25■□□□□ 0.51
KRT9P35527 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT9P35527 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
KRT9P35527 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
KRT9P35527 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT9P35527 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT9P35527 OVCH1-AS1-204ENST00000641955 5529 ntBASIC18.25■□□□□ 0.51
KRT9P35527 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.25■□□□□ 0.51
KRT9P35527 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
KRT9P35527 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT9P35527 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
KRT9P35527 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRT9P35527 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRT9P35527 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
KRT9P35527 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRT9P35527 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
KRT9P35527 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
KRT9P35527 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.24■□□□□ 0.51
KRT9P35527 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC18.24■□□□□ 0.51
KRT9P35527 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
KRT9P35527 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRT9P35527 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.24■□□□□ 0.51
KRT9P35527 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
KRT9P35527 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.24■□□□□ 0.51
KRT9P35527 AC139887.3-201ENST00000568585 713 ntBASIC18.24■□□□□ 0.51
KRT9P35527 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.24■□□□□ 0.51
KRT9P35527 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
KRT9P35527 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRT9P35527 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
KRT9P35527 SNX33P1-201ENST00000592116 1762 ntBASIC18.24■□□□□ 0.51
KRT9P35527 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRT9P35527 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
KRT9P35527 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRT9P35527 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.24■□□□□ 0.51
KRT9P35527 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC18.24■□□□□ 0.51
KRT9P35527 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.23■□□□□ 0.51
KRT9P35527 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
KRT9P35527 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
KRT9P35527 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT9P35527 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms