Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
LTAP01374 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC12.57□□□□□ -0.4
LTAP01374 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LTAP01374 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LTAP01374 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LTAP01374 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC12.57□□□□□ -0.4
LTAP01374 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LTAP01374 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LTAP01374 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC12.57□□□□□ -0.4
LTAP01374 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC12.57□□□□□ -0.4
LTAP01374 LY6E-213ENST00000522528 606 ntTSL 3 BASIC12.57□□□□□ -0.4
LTAP01374 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC12.57□□□□□ -0.4
LTAP01374 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC12.57□□□□□ -0.4
LTAP01374 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC12.57□□□□□ -0.4
LTAP01374 TERC-201ENST00000602385 541 ntBASIC12.57□□□□□ -0.4
LTAP01374 IGHV3-41-201ENST00000613121 348 ntBASIC12.57□□□□□ -0.4
LTAP01374 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LTAP01374 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC12.57□□□□□ -0.4
LTAP01374 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
LTAP01374 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC12.57□□□□□ -0.4
LTAP01374 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC12.57□□□□□ -0.4
LTAP01374 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
LTAP01374 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC12.57□□□□□ -0.4
LTAP01374 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC12.57□□□□□ -0.4
LTAP01374 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LTAP01374 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
LTAP01374 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LTAP01374 LINC01144-201ENST00000626198 1710 ntBASIC12.57□□□□□ -0.4
LTAP01374 TOP3BP1-201ENST00000420768 1380 ntBASIC12.56□□□□□ -0.4
LTAP01374 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LTAP01374 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LTAP01374 HARS-204ENST00000438307 1789 ntTSL 2 BASIC12.56□□□□□ -0.4
LTAP01374 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LTAP01374 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LTAP01374 TNRC18P2-201ENST00000417666 2714 ntBASIC12.56□□□□□ -0.4
LTAP01374 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LTAP01374 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LTAP01374 KRT8P39-201ENST00000396270 1433 ntBASIC12.56□□□□□ -0.4
LTAP01374 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
LTAP01374 PPT1-215ENST00000641471 2368 ntBASIC12.56□□□□□ -0.4
LTAP01374 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
LTAP01374 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LTAP01374 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
LTAP01374 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LTAP01374 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
LTAP01374 CCS-201ENST00000310190 942 ntTSL 5 BASIC12.56□□□□□ -0.4
LTAP01374 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
LTAP01374 AC117947.1-201ENST00000427448 529 ntBASIC12.56□□□□□ -0.4
LTAP01374 SPDYE13P-201ENST00000445314 798 ntBASIC12.56□□□□□ -0.4
LTAP01374 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC12.56□□□□□ -0.4
LTAP01374 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC12.56□□□□□ -0.4
LTAP01374 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC12.56□□□□□ -0.4
LTAP01374 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC12.56□□□□□ -0.4
LTAP01374 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LTAP01374 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
LTAP01374 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC12.56□□□□□ -0.4
LTAP01374 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC12.56□□□□□ -0.4
LTAP01374 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
LTAP01374 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LTAP01374 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC12.56□□□□□ -0.4
LTAP01374 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LTAP01374 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
LTAP01374 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LTAP01374 WARS-232ENST00000556645 2508 ntTSL 5 BASIC12.56□□□□□ -0.4
LTAP01374 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC12.56□□□□□ -0.4
LTAP01374 AC069224.1-201ENST00000566372 1715 ntBASIC12.56□□□□□ -0.4
LTAP01374 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LTAP01374 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC12.56□□□□□ -0.4
LTAP01374 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC12.56□□□□□ -0.4
LTAP01374 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LTAP01374 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC12.56□□□□□ -0.4
LTAP01374 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC12.56□□□□□ -0.4
LTAP01374 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
LTAP01374 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
LTAP01374 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LTAP01374 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LTAP01374 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
LTAP01374 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC12.56□□□□□ -0.4
LTAP01374 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC12.55□□□□□ -0.4
LTAP01374 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC12.55□□□□□ -0.4
LTAP01374 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LTAP01374 LINC02228-204ENST00000642115 2962 ntBASIC12.55□□□□□ -0.4
LTAP01374 PCGF3-213ENST00000620529 1899 ntBASIC12.55□□□□□ -0.4
LTAP01374 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LTAP01374 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
LTAP01374 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
LTAP01374 AC004817.3-201ENST00000602957 2129 ntBASIC12.55□□□□□ -0.4
LTAP01374 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC12.55□□□□□ -0.4
LTAP01374 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC12.55□□□□□ -0.4
LTAP01374 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
LTAP01374 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LTAP01374 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
LTAP01374 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC12.55□□□□□ -0.4
LTAP01374 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC12.55□□□□□ -0.4
LTAP01374 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LTAP01374 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LTAP01374 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LTAP01374 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LTAP01374 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC12.55□□□□□ -0.4
LTAP01374 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms