RNA–Protein interactions for RNA: ENST00000580974.5

PITPNC1-203, Transcript of phosphatidylinositol transfer protein cytoplasmic 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PITPNC1, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNC1-203ENST00000580974 DCAF8L2P0C7V8 631 aa26.08■■□□□ 1.77
PITPNC1-203ENST00000580974 PELP1Q8IZL8 1130 aaKnown RBP25.95■■□□□ 1.74
PITPNC1-203ENST00000580974 SUPT5HO00267 1087 aaKnown RBP25.1■■□□□ 1.61
PITPNC1-203ENST00000580974 ERICH6Q7L0X2 663 aa25.03■■□□□ 1.6
PITPNC1-203ENST00000580974 EHMT2Q96KQ7 1210 aa24.8■■□□□ 1.56
PITPNC1-203ENST00000580974 CCER1Q8TC90 406 aaPredicted RBP24.74■■□□□ 1.55
PITPNC1-203ENST00000580974 MYT1Q01538 1121 aa24.69■■□□□ 1.54
PITPNC1-203ENST00000580974 CENPBP07199 599 aaPredicted RBP24.55■■□□□ 1.52
PITPNC1-203ENST00000580974 APLP2Q06481 763 aa24.47■■□□□ 1.51
PITPNC1-203ENST00000580974 SHROOM4Q9ULL8 1493 aa24.2■■□□□ 1.46
PITPNC1-203ENST00000580974 PCGF6Q9BYE7 350 aa24.18■■□□□ 1.46
PITPNC1-203ENST00000580974 TTBK1Q5TCY1 1321 aaPredicted RBP24.1■■□□□ 1.45
PITPNC1-203ENST00000580974 NEFLP07196 543 aa24.07■■□□□ 1.44
PITPNC1-203ENST00000580974 ZEB1P37275 1124 aaPredicted RBP24.03■■□□□ 1.44
PITPNC1-203ENST00000580974 YTHDC1Q96MU7 727 aaKnown RBP23.89■■□□□ 1.41
PITPNC1-203ENST00000580974 FAM9AQ8IZU1 332 aaPredicted RBP23.85■■□□□ 1.41
PITPNC1-203ENST00000580974 DAXXQ9UER7 740 aaPredicted RBP23.65■■□□□ 1.38
PITPNC1-203ENST00000580974 RANGAP1P46060 587 aaPredicted RBP23.51■■□□□ 1.35
PITPNC1-203ENST00000580974 ATP1B4Q9UN42 357 aaPredicted RBP23.38■■□□□ 1.33
PITPNC1-203ENST00000580974 RTL5Q5HYW3 569 aaPredicted RBP23.2■■□□□ 1.31
PITPNC1-203ENST00000580974 TRIM41Q8WV44 630 aa23.13■■□□□ 1.29
PITPNC1-203ENST00000580974 ZNF316A6NFI3 1004 aaPredicted RBP23.07■■□□□ 1.28
PITPNC1-203ENST00000580974 UBTFP17480 764 aaKnown RBP23.07■■□□□ 1.28
PITPNC1-203ENST00000580974 HRCP23327 699 aa22.96■■□□□ 1.27
PITPNC1-203ENST00000580974 POLR3GLQ9BT43 218 aa22.94■■□□□ 1.26
PITPNC1-203ENST00000580974 PPARGC1BQ86YN6 1023 aaKnown RBP22.91■■□□□ 1.26
PITPNC1-203ENST00000580974 NISCHQ9Y2I1 1504 aa22.89■■□□□ 1.25
PITPNC1-203ENST00000580974 TRIM26Q12899 539 aaPredicted RBP22.86■■□□□ 1.25
PITPNC1-203ENST00000580974 CLSPNQ9HAW4 1339 aa22.83■■□□□ 1.24
PITPNC1-203ENST00000580974 CNGB1Q14028 1251 aaPredicted RBP22.75■■□□□ 1.23
PITPNC1-203ENST00000580974 ITGAEP38570 1179 aa22.62■■□□□ 1.21
PITPNC1-203ENST00000580974 DIEXFQ68CQ4 756 aaKnown RBP22.5■■□□□ 1.19
PITPNC1-203ENST00000580974 MYT1LQ9UL68 1186 aa22.49■■□□□ 1.19
PITPNC1-203ENST00000580974 BCANQ96GW7 911 aa22.47■■□□□ 1.19
PITPNC1-203ENST00000580974 SLC4A1APQ9BWU0 796 aaKnown RBP22.46■■□□□ 1.19
PITPNC1-203ENST00000580974 HNRNPUL2Q1KMD3 747 aaKnown RBP22.43■■□□□ 1.18
PITPNC1-203ENST00000580974 CDK11AQ9UQ88 783 aaPredicted RBP22.41■■□□□ 1.18
PITPNC1-203ENST00000580974 GTF3C3Q9Y5Q9 886 aa22.38■■□□□ 1.17
PITPNC1-203ENST00000580974 EIF5BO60841 1220 aaKnown RBP22.33■■□□□ 1.16
PITPNC1-203ENST00000580974 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.32■■□□□ 1.16
PITPNC1-203ENST00000580974 ZBTB47Q9UFB7 747 aaPredicted RBP22.23■■□□□ 1.15
PITPNC1-203ENST00000580974 CHIC1Q5VXU3 224 aa22.21■■□□□ 1.15
PITPNC1-203ENST00000580974 GLIPR1L2Q4G1C9 344 aa22.18■■□□□ 1.14
PITPNC1-203ENST00000580974 ANP32AP39687 249 aaKnown RBP22.12■■□□□ 1.13
PITPNC1-203ENST00000580974 LOC105371045A0A1W2PR82 267 aa22.09■■□□□ 1.13
PITPNC1-203ENST00000580974 ANP32CO43423 234 aa22.04■■□□□ 1.12
PITPNC1-203ENST00000580974 ANP32BQ92688 251 aaKnown RBP22.02■■□□□ 1.12
PITPNC1-203ENST00000580974 BCL11AQ9H165 835 aa22.01■■□□□ 1.11
PITPNC1-203ENST00000580974 CANXP27824 592 aaKnown RBP22■■□□□ 1.11
PITPNC1-203ENST00000580974 NPM2Q86SE8 214 aaKnown RBP21.98■■□□□ 1.11
PITPNC1-203ENST00000580974 NEUROD1Q13562 356 aa21.93■■□□□ 1.1
PITPNC1-203ENST00000580974 TRIM52Q96A61 297 aa21.89■■□□□ 1.09
PITPNC1-203ENST00000580974 FAM50AQ14320 339 aaKnown RBP21.87■■□□□ 1.09
PITPNC1-203ENST00000580974 ACIN1Q9UKV3 1341 aaKnown RBP21.87■■□□□ 1.09
PITPNC1-203ENST00000580974 SLC24A1O60721 1099 aa21.8■■□□□ 1.08
PITPNC1-203ENST00000580974 ZNF326Q5BKZ1 582 aaKnown RBP21.76■■□□□ 1.07
PITPNC1-203ENST00000580974 HSP90AA1P07900 732 aaKnown RBP21.74■■□□□ 1.07
PITPNC1-203ENST00000580974 NEFMP07197 916 aa21.66■■□□□ 1.06
PITPNC1-203ENST00000580974 NBR1Q14596 966 aa21.65■■□□□ 1.06
PITPNC1-203ENST00000580974 FKBP8Q14318 412 aa21.62■■□□□ 1.05
PITPNC1-203ENST00000580974 UPF2Q9HAU5 1272 aaKnown RBP21.61■■□□□ 1.05
PITPNC1-203ENST00000580974 ARXQ96QS3 562 aa21.57■■□□□ 1.04
PITPNC1-203ENST00000580974 TNNT2P45379 298 aaPredicted RBP21.37■■□□□ 1.01
PITPNC1-203ENST00000580974 HNRNPUQ00839 825 aaKnown RBP eCLIP21.31■■□□□ 1
PITPNC1-203ENST00000580974 CCDC136Q96JN2 1154 aa21.31■■□□□ 1
PITPNC1-203ENST00000580974 CDK11BP21127 795 aaKnown RBP21.29■■□□□ 1
PITPNC1-203ENST00000580974 TRIM44Q96DX7 344 aaPredicted RBP21.28■■□□□ 1
PITPNC1-203ENST00000580974 FAM9BQ8IZU0 186 aa21.23■□□□□ 0.99
PITPNC1-203ENST00000580974 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.23■□□□□ 0.99
PITPNC1-203ENST00000580974 SALL2Q9Y467 1007 aaPredicted RBP21.17■□□□□ 0.98
PITPNC1-203ENST00000580974 DDRGK1Q96HY6 314 aa21.12■□□□□ 0.97
PITPNC1-203ENST00000580974 ANP32EQ9BTT0 268 aa21.11■□□□□ 0.97
PITPNC1-203ENST00000580974 NCLP19338 710 aaKnown RBP21.11■□□□□ 0.97
PITPNC1-203ENST00000580974 BECN1Q14457 450 aa21.08■□□□□ 0.97
PITPNC1-203ENST00000580974 DDX10Q13206 875 aaKnown RBP21.06■□□□□ 0.96
PITPNC1-203ENST00000580974 NAP1L5Q96NT1 182 aaPredicted RBP21.06■□□□□ 0.96
PITPNC1-203ENST00000580974 PTMAP06454 111 aaKnown RBP21.05■□□□□ 0.96
PITPNC1-203ENST00000580974 SCAF1Q9H7N4 1312 aaKnown RBP21.05■□□□□ 0.96
PITPNC1-203ENST00000580974 DNTTIP2Q5QJE6 756 aaKnown RBP21.04■□□□□ 0.96
PITPNC1-203ENST00000580974 GOLGA6L22H0YM25 854 aa21.04■□□□□ 0.96
PITPNC1-203ENST00000580974 IRX6P78412 446 aaPredicted RBP21.03■□□□□ 0.96
PITPNC1-203ENST00000580974 ERICH6BQ5W0A0 696 aa21.02■□□□□ 0.96
PITPNC1-203ENST00000580974 TONSLQ96HA7 1378 aa21.01■□□□□ 0.95
PITPNC1-203ENST00000580974 TMC1Q8TDI8 760 aa21■□□□□ 0.95
PITPNC1-203ENST00000580974 RTN4Q9NQC3 1192 aaKnown RBP20.99■□□□□ 0.95
PITPNC1-203ENST00000580974 MYH16Q9H6N6 1097 aa20.98■□□□□ 0.95
PITPNC1-203ENST00000580974 WDR43Q15061 677 aaKnown RBP eCLIP20.95■□□□□ 0.94
PITPNC1-203ENST00000580974 ZNF777Q9ULD5 760 aaPredicted RBP20.91■□□□□ 0.94
PITPNC1-203ENST00000580974 ZRSR1Q15695 479 aaKnown RBP20.89■□□□□ 0.93
PITPNC1-203ENST00000580974 MRS2Q9HD23 443 aa20.89■□□□□ 0.93
PITPNC1-203ENST00000580974 ARID3CA6NKF2 412 aa20.89■□□□□ 0.93
PITPNC1-203ENST00000580974 PPM1GO15355 546 aaPredicted RBP20.86■□□□□ 0.93
PITPNC1-203ENST00000580974 P3H3Q8IVL6 736 aa20.85■□□□□ 0.93
PITPNC1-203ENST00000580974 AMER1Q5JTC6 1135 aaPredicted RBP20.84■□□□□ 0.93
PITPNC1-203ENST00000580974 CHGAP10645 457 aaKnown RBP20.83■□□□□ 0.93
PITPNC1-203ENST00000580974 FBLN2P98095 1184 aa20.82■□□□□ 0.92
PITPNC1-203ENST00000580974 TPRNQ4KMQ1 711 aa20.81■□□□□ 0.92
PITPNC1-203ENST00000580974 STAG3Q9UJ98 1225 aa20.77■□□□□ 0.92
PITPNC1-203ENST00000580974 LAS1LQ9Y4W2 734 aaKnown RBP20.77■□□□□ 0.91
PITPNC1-203ENST00000580974 MIER1Q8N108 512 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms