RNA–Protein interactions for RNA: ENST00000336577.8

MMP25-201, Transcript of matrix metallopeptidase 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP25, Length 3,554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP25-201ENST00000336577 NISCHQ9Y2I1 1504 aa27.63■■■□□ 2.01
MMP25-201ENST00000336577 PPARGC1BQ86YN6 1023 aaKnown RBP26.04■■□□□ 1.76
MMP25-201ENST00000336577 PCGF6Q9BYE7 350 aa25.96■■□□□ 1.75
MMP25-201ENST00000336577 HRCP23327 699 aa25.95■■□□□ 1.74
MMP25-201ENST00000336577 SUPT5HO00267 1087 aaKnown RBP25.86■■□□□ 1.73
MMP25-201ENST00000336577 SHROOM4Q9ULL8 1493 aa25.65■■□□□ 1.7
MMP25-201ENST00000336577 PELP1Q8IZL8 1130 aaKnown RBP25.43■■□□□ 1.66
MMP25-201ENST00000336577 DCAF8L2P0C7V8 631 aa25.33■■□□□ 1.65
MMP25-201ENST00000336577 SCAF1Q9H7N4 1312 aaKnown RBP24.91■■□□□ 1.58
MMP25-201ENST00000336577 LOC105371045A0A1W2PR82 267 aa24.74■■□□□ 1.55
MMP25-201ENST00000336577 CHIC1Q5VXU3 224 aa24.7■■□□□ 1.54
MMP25-201ENST00000336577 EHMT2Q96KQ7 1210 aa24.69■■□□□ 1.54
MMP25-201ENST00000336577 MYO15BQ96JP2 1530 aa24.58■■□□□ 1.53
MMP25-201ENST00000336577 TRIM26Q12899 539 aaPredicted RBP24.43■■□□□ 1.5
MMP25-201ENST00000336577 MYT1Q01538 1121 aa24.43■■□□□ 1.5
MMP25-201ENST00000336577 GTF3C3Q9Y5Q9 886 aa24.34■■□□□ 1.49
MMP25-201ENST00000336577 NEUROD1Q13562 356 aa24.25■■□□□ 1.47
MMP25-201ENST00000336577 ZEB1P37275 1124 aaPredicted RBP24.23■■□□□ 1.47
MMP25-201ENST00000336577 YTHDC1Q96MU7 727 aaKnown RBP24.21■■□□□ 1.47
MMP25-201ENST00000336577 FAM9AQ8IZU1 332 aaPredicted RBP24.18■■□□□ 1.46
MMP25-201ENST00000336577 ACIN1Q9UKV3 1341 aaKnown RBP24.16■■□□□ 1.46
MMP25-201ENST00000336577 CENPBP07199 599 aaPredicted RBP24.1■■□□□ 1.45
MMP25-201ENST00000336577 TTBK1Q5TCY1 1321 aaPredicted RBP24.03■■□□□ 1.44
MMP25-201ENST00000336577 CCER1Q8TC90 406 aaPredicted RBP23.94■■□□□ 1.42
MMP25-201ENST00000336577 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.92■■□□□ 1.42
MMP25-201ENST00000336577 DIEXFQ68CQ4 756 aaKnown RBP23.83■■□□□ 1.4
MMP25-201ENST00000336577 DCAF1Q9Y4B6 1507 aa23.75■■□□□ 1.39
MMP25-201ENST00000336577 TRIM41Q8WV44 630 aa23.5■■□□□ 1.35
MMP25-201ENST00000336577 ABCC9O60706 1549 aa23.37■■□□□ 1.33
MMP25-201ENST00000336577 CCDC180Q9P1Z9 1646 aa23.36■■□□□ 1.33
MMP25-201ENST00000336577 BCL11AQ9H165 835 aa23.31■■□□□ 1.32
MMP25-201ENST00000336577 ZCCHC6Q5VYS8 1495 aaKnown RBP23.29■■□□□ 1.32
MMP25-201ENST00000336577 MIER1Q8N108 512 aa23.15■■□□□ 1.3
MMP25-201ENST00000336577 BCANQ96GW7 911 aa23.11■■□□□ 1.29
MMP25-201ENST00000336577 ZNF316A6NFI3 1004 aaPredicted RBP23.06■■□□□ 1.28
MMP25-201ENST00000336577 ANP32EQ9BTT0 268 aa22.96■■□□□ 1.27
MMP25-201ENST00000336577 CSRNP3Q8WYN3 585 aa22.94■■□□□ 1.26
MMP25-201ENST00000336577 HNRNPUL2Q1KMD3 747 aaKnown RBP22.9■■□□□ 1.26
MMP25-201ENST00000336577 PABPN1Q86U42 306 aaKnown RBP eCLIP22.78■■□□□ 1.24
MMP25-201ENST00000336577 SUPT16HQ9Y5B9 1047 aaKnown RBP22.77■■□□□ 1.24
MMP25-201ENST00000336577 TSHZ2Q9NRE2 1034 aa22.73■■□□□ 1.23
MMP25-201ENST00000336577 RANGAP1P46060 587 aaPredicted RBP22.71■■□□□ 1.23
MMP25-201ENST00000336577 ERICH6Q7L0X2 663 aa22.71■■□□□ 1.23
MMP25-201ENST00000336577 SCRIBQ14160 1630 aa22.57■■□□□ 1.2
MMP25-201ENST00000336577 UBTFP17480 764 aaKnown RBP22.56■■□□□ 1.2
MMP25-201ENST00000336577 ITGAEP38570 1179 aa22.56■■□□□ 1.2
MMP25-201ENST00000336577 FKBP8Q14318 412 aa22.51■■□□□ 1.19
MMP25-201ENST00000336577 PRKCSHP14314 528 aaPredicted RBP22.44■■□□□ 1.18
MMP25-201ENST00000336577 NEFLP07196 543 aa22.43■■□□□ 1.18
MMP25-201ENST00000336577 APLP2Q06481 763 aa22.32■■□□□ 1.16
MMP25-201ENST00000336577 KCNH8Q96L42 1107 aa22.3■■□□□ 1.16
MMP25-201ENST00000336577 RBM19Q9Y4C8 960 aaKnown RBP22.3■■□□□ 1.16
MMP25-201ENST00000336577 TRIM52Q96A61 297 aa22.2■■□□□ 1.15
MMP25-201ENST00000336577 IRX6P78412 446 aaPredicted RBP22.17■■□□□ 1.14
MMP25-201ENST00000336577 NBR1Q14596 966 aa22.14■■□□□ 1.14
MMP25-201ENST00000336577 CLSPNQ9HAW4 1339 aa22.11■■□□□ 1.13
MMP25-201ENST00000336577 RSF1Q96T23 1441 aaPredicted RBP22.09■■□□□ 1.13
MMP25-201ENST00000336577 RTN4Q9NQC3 1192 aaKnown RBP22.06■■□□□ 1.12
MMP25-201ENST00000336577 CECR2Q9BXF3 1484 aa22.05■■□□□ 1.12
MMP25-201ENST00000336577 CCDC136Q96JN2 1154 aa22.04■■□□□ 1.12
MMP25-201ENST00000336577 ANO8Q9HCE9 1232 aaPredicted RBP22.04■■□□□ 1.12
MMP25-201ENST00000336577 DDX10Q13206 875 aaKnown RBP22.03■■□□□ 1.12
MMP25-201ENST00000336577 HIRIP3Q9BW71 556 aaPredicted RBP22.02■■□□□ 1.12
MMP25-201ENST00000336577 DEKP35659 375 aaKnown RBP21.97■■□□□ 1.11
MMP25-201ENST00000336577 MSH5O43196 834 aa21.96■■□□□ 1.11
MMP25-201ENST00000336577 CDK11AQ9UQ88 783 aaPredicted RBP21.95■■□□□ 1.1
MMP25-201ENST00000336577 CEP162Q5TB80 1403 aa21.91■■□□□ 1.1
MMP25-201ENST00000336577 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.88■■□□□ 1.09
MMP25-201ENST00000336577 RB1CC1Q8TDY2 1594 aa21.88■■□□□ 1.09
MMP25-201ENST00000336577 CNGB1Q14028 1251 aaPredicted RBP21.87■■□□□ 1.09
MMP25-201ENST00000336577 EIF5BO60841 1220 aaKnown RBP21.83■■□□□ 1.08
MMP25-201ENST00000336577 NACADO15069 1562 aa21.81■■□□□ 1.08
MMP25-201ENST00000336577 RTL5Q5HYW3 569 aaPredicted RBP21.75■■□□□ 1.07
MMP25-201ENST00000336577 SALL2Q9Y467 1007 aaPredicted RBP21.75■■□□□ 1.07
MMP25-201ENST00000336577 HNRNPUQ00839 825 aaKnown RBP eCLIP21.68■■□□□ 1.06
MMP25-201ENST00000336577 ANP32CO43423 234 aa21.68■■□□□ 1.06
MMP25-201ENST00000336577 MROH2BQ7Z745 1585 aa21.68■■□□□ 1.06
MMP25-201ENST00000336577 SENP3-EIF4A1A0A087X0R7 540 aa21.62■■□□□ 1.05
MMP25-201ENST00000336577 SOGA1O94964 1423 aa21.6■■□□□ 1.05
MMP25-201ENST00000336577 B4GALNT3Q6L9W6 998 aa21.58■■□□□ 1.05
MMP25-201ENST00000336577 NPM2Q86SE8 214 aaKnown RBP21.58■■□□□ 1.05
MMP25-201ENST00000336577 IL27Q8NEV9 243 aa21.54■■□□□ 1.04
MMP25-201ENST00000336577 ATP1B4Q9UN42 357 aaPredicted RBP21.52■■□□□ 1.04
MMP25-201ENST00000336577 WIZO95785 1651 aa21.51■■□□□ 1.03
MMP25-201ENST00000336577 SIN3AQ96ST3 1273 aa21.5■■□□□ 1.03
MMP25-201ENST00000336577 TNIKQ9UKE5 1360 aa21.49■■□□□ 1.03
MMP25-201ENST00000336577 NOP58Q9Y2X3 529 aaKnown RBP21.48■■□□□ 1.03
MMP25-201ENST00000336577 WRNQ14191 1432 aaPredicted RBP eCLIP21.48■■□□□ 1.03
MMP25-201ENST00000336577 CCDC88BA6NC98 1476 aa21.48■■□□□ 1.03
MMP25-201ENST00000336577 PAK3O75914 559 aaPredicted RBP21.46■■□□□ 1.03
MMP25-201ENST00000336577 MYT1LQ9UL68 1186 aa21.45■■□□□ 1.02
MMP25-201ENST00000336577 FANCIQ9NVI1 1328 aa21.45■■□□□ 1.02
MMP25-201ENST00000336577 DHX57Q6P158 1386 aaKnown RBP21.42■■□□□ 1.02
MMP25-201ENST00000336577 ABCC8Q09428 1581 aa21.42■■□□□ 1.02
MMP25-201ENST00000336577 FAM9BQ8IZU0 186 aa21.4■■□□□ 1.02
MMP25-201ENST00000336577 RUSC2Q8N2Y8 1516 aa21.39■■□□□ 1.02
MMP25-201ENST00000336577 ANP32AP39687 249 aaKnown RBP21.39■■□□□ 1.01
MMP25-201ENST00000336577 LAS1LQ9Y4W2 734 aaKnown RBP21.39■■□□□ 1.01
MMP25-201ENST00000336577 ZBTB47Q9UFB7 747 aaPredicted RBP21.38■■□□□ 1.01
MMP25-201ENST00000336577 FAM50AQ14320 339 aaKnown RBP21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms