RNA–Protein interactions for RNA: ENST00000559240.5

PBX1-215, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 2,866 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-215ENST00000559240 NISCHQ9Y2I1 1504 aa37.8■■■■□ 3.64
PBX1-215ENST00000559240 CCDC180Q9P1Z9 1646 aa33.37■■■□□ 2.93
PBX1-215ENST00000559240 ZCCHC6Q5VYS8 1495 aaKnown RBP31.73■■■□□ 2.67
PBX1-215ENST00000559240 DCAF1Q9Y4B6 1507 aa31.5■■■□□ 2.63
PBX1-215ENST00000559240 ABCC9O60706 1549 aa31.41■■■□□ 2.62
PBX1-215ENST00000559240 MYO15BQ96JP2 1530 aa31.33■■■□□ 2.61
PBX1-215ENST00000559240 NACADO15069 1562 aa31.08■■■□□ 2.57
PBX1-215ENST00000559240 RB1CC1Q8TDY2 1594 aa30.84■■■□□ 2.53
PBX1-215ENST00000559240 DCAF8L2P0C7V8 631 aa30.74■■■□□ 2.51
PBX1-215ENST00000559240 SCRIBQ14160 1630 aa30.26■■■□□ 2.43
PBX1-215ENST00000559240 UNC13AQ9UPW8 1703 aa30.19■■■□□ 2.42
PBX1-215ENST00000559240 SHROOM4Q9ULL8 1493 aa30.04■■■□□ 2.4
PBX1-215ENST00000559240 BICRAQ9NZM4 1560 aa29.88■■■□□ 2.37
PBX1-215ENST00000559240 PABPN1Q86U42 306 aaKnown RBP eCLIP29.39■■■□□ 2.3
PBX1-215ENST00000559240 BAZ1AQ9NRL2 1556 aaPredicted RBP29.26■■■□□ 2.27
PBX1-215ENST00000559240 CECR2Q9BXF3 1484 aa29.23■■■□□ 2.27
PBX1-215ENST00000559240 SMARCA4P51532 1647 aa29.16■■■□□ 2.26
PBX1-215ENST00000559240 RSF1Q96T23 1441 aaPredicted RBP29.09■■■□□ 2.25
PBX1-215ENST00000559240 MROH2BQ7Z745 1585 aa29.08■■■□□ 2.25
PBX1-215ENST00000559240 PEG3Q9GZU2 1588 aa28.98■■■□□ 2.23
PBX1-215ENST00000559240 EIF4G1Q04637 1599 aaKnown RBP28.98■■■□□ 2.23
PBX1-215ENST00000559240 WIZO95785 1651 aa28.82■■■□□ 2.2
PBX1-215ENST00000559240 SMARCA2P51531 1590 aa28.79■■■□□ 2.2
PBX1-215ENST00000559240 ATAD2BQ9ULI0 1458 aa28.72■■■□□ 2.19
PBX1-215ENST00000559240 SUPT5HO00267 1087 aaKnown RBP28.71■■■□□ 2.19
PBX1-215ENST00000559240 TOP2AP11388 1531 aaKnown RBP28.66■■■□□ 2.18
PBX1-215ENST00000559240 HMGXB3Q12766 1538 aa28.63■■■□□ 2.17
PBX1-215ENST00000559240 NCAPD3P42695 1498 aa28.62■■■□□ 2.17
PBX1-215ENST00000559240 CC2D2AQ9P2K1 1620 aa28.6■■■□□ 2.17
PBX1-215ENST00000559240 BAZ1BQ9UIG0 1483 aaKnown RBP28.49■■■□□ 2.15
PBX1-215ENST00000559240 CCDC88BA6NC98 1476 aa28.22■■■□□ 2.11
PBX1-215ENST00000559240 DNAJC5BQ9UF47 199 aa27.95■■■□□ 2.07
PBX1-215ENST00000559240 PRDM2Q13029 1718 aa27.86■■■□□ 2.05
PBX1-215ENST00000559240 CFTRP13569 1480 aa27.85■■■□□ 2.05
PBX1-215ENST00000559240 CADPSQ9ULU8 1353 aa27.75■■■□□ 2.03
PBX1-215ENST00000559240 LAMC3Q9Y6N6 1575 aa27.75■■■□□ 2.03
PBX1-215ENST00000559240 CHIC1Q5VXU3 224 aa27.5■■□□□ 1.99
PBX1-215ENST00000559240 NESP48681 1621 aa27.48■■□□□ 1.99
PBX1-215ENST00000559240 PDS5BQ9NTI5 1447 aa27.43■■□□□ 1.98
PBX1-215ENST00000559240 FANCD2Q9BXW9 1451 aa27.42■■□□□ 1.98
PBX1-215ENST00000559240 ABCC8Q09428 1581 aa27.39■■□□□ 1.98
PBX1-215ENST00000559240 WRNQ14191 1432 aaPredicted RBP eCLIP27.37■■□□□ 1.979e-6■■■■■ 50.1
PBX1-215ENST00000559240 BIVM-ERCC5R4GMW8 1640 aa27.37■■□□□ 1.97
PBX1-215ENST00000559240 TOP2BQ02880 1626 aa27.33■■□□□ 1.97
PBX1-215ENST00000559240 CEP164Q9UPV0 1460 aa27.31■■□□□ 1.96
PBX1-215ENST00000559240 KIF21AQ7Z4S6 1674 aa27.31■■□□□ 1.96
PBX1-215ENST00000559240 SYNJ1O43426 1573 aa27.3■■□□□ 1.96
PBX1-215ENST00000559240 CUX1P39880 1505 aa27.25■■□□□ 1.95
PBX1-215ENST00000559240 DNMBPQ6XZF7 1577 aa27.22■■□□□ 1.95
PBX1-215ENST00000559240 TRIM41Q8WV44 630 aa27.19■■□□□ 1.94
PBX1-215ENST00000559240 PELP1Q8IZL8 1130 aaKnown RBP27.13■■□□□ 1.93
PBX1-215ENST00000559240 MRC2Q9UBG0 1479 aa27.12■■□□□ 1.93
PBX1-215ENST00000559240 TOPBP1Q92547 1522 aa27.12■■□□□ 1.93
PBX1-215ENST00000559240 URB2Q14146 1524 aaKnown RBP27.11■■□□□ 1.93
PBX1-215ENST00000559240 WDR62O43379 1518 aa27.07■■□□□ 1.92
PBX1-215ENST00000559240 THOC2Q8NI27 1593 aaKnown RBP27.06■■□□□ 1.92
PBX1-215ENST00000559240 ERCC6Q03468 1493 aa27.01■■□□□ 1.92
PBX1-215ENST00000559240 FGD5Q6ZNL6 1462 aa26.98■■□□□ 1.91
PBX1-215ENST00000559240 EEA1Q15075 1411 aa26.94■■□□□ 1.9
PBX1-215ENST00000559240 POLA1P09884 1462 aaPredicted RBP26.93■■□□□ 1.9
PBX1-215ENST00000559240 WDR97A6NE52 1622 aa26.89■■□□□ 1.9
PBX1-215ENST00000559240 ABCA10Q8WWZ4 1543 aa26.86■■□□□ 1.89
PBX1-215ENST00000559240 TARBP1Q13395 1621 aaKnown RBP26.83■■□□□ 1.89
PBX1-215ENST00000559240 SOGA1O94964 1423 aa26.78■■□□□ 1.88
PBX1-215ENST00000559240 CUX2O14529 1486 aa26.78■■□□□ 1.88
PBX1-215ENST00000559240 IFT140Q96RY7 1462 aa26.75■■□□□ 1.87
PBX1-215ENST00000559240 KIF27Q86VH2 1401 aa26.74■■□□□ 1.87
PBX1-215ENST00000559240 RAD54L2Q9Y4B4 1467 aa26.72■■□□□ 1.87
PBX1-215ENST00000559240 ABCA5Q8WWZ7 1642 aa26.71■■□□□ 1.87
PBX1-215ENST00000559240 RUSC2Q8N2Y8 1516 aa26.68■■□□□ 1.86
PBX1-215ENST00000559240 KIF21BO75037 1637 aa26.61■■□□□ 1.85
PBX1-215ENST00000559240 ERICH3Q5RHP9 1530 aa26.58■■□□□ 1.85
PBX1-215ENST00000559240 CSRNP3Q8WYN3 585 aa26.57■■□□□ 1.84
PBX1-215ENST00000559240 CUL7Q14999 1698 aa26.53■■□□□ 1.84
PBX1-215ENST00000559240 PRXQ9BXM0 1461 aa26.53■■□□□ 1.84
PBX1-215ENST00000559240 GAPVD1Q14C86 1478 aa26.52■■□□□ 1.84
PBX1-215ENST00000559240 PBRM1Q86U86 1689 aa26.51■■□□□ 1.83
PBX1-215ENST00000559240 IGF1RP08069 1367 aa26.5■■□□□ 1.83
PBX1-215ENST00000559240 EIF4G3O43432 1585 aaKnown RBP26.48■■□□□ 1.83
PBX1-215ENST00000559240 ZNF608Q9ULD9 1512 aaPredicted RBP26.44■■□□□ 1.82
PBX1-215ENST00000559240 TDRD9Q8NDG6 1382 aaKnown RBP26.43■■□□□ 1.82
PBX1-215ENST00000559240 GRIN2BQ13224 1484 aa26.43■■□□□ 1.82
PBX1-215ENST00000559240 FAM9AQ8IZU1 332 aaPredicted RBP26.43■■□□□ 1.82
PBX1-215ENST00000559240 GOLGA3Q08378 1498 aa26.42■■□□□ 1.82
PBX1-215ENST00000559240 MYT1Q01538 1121 aa26.4■■□□□ 1.82
PBX1-215ENST00000559240 AQRO60306 1485 aaKnown RBP eCLIP26.37■■□□□ 1.81
PBX1-215ENST00000559240 ADAMTS12P58397 1594 aa26.35■■□□□ 1.81
PBX1-215ENST00000559240 RAPGEF2Q9Y4G8 1499 aa26.34■■□□□ 1.81
PBX1-215ENST00000559240 CARMIL1Q5VZK9 1371 aa26.33■■□□□ 1.81
PBX1-215ENST00000559240 MAGI1Q96QZ7 1491 aaPredicted RBP26.32■■□□□ 1.8
PBX1-215ENST00000559240 FHAD1B1AJZ9 1412 aa26.29■■□□□ 1.8
PBX1-215ENST00000559240 TNIKQ9UKE5 1360 aa26.27■■□□□ 1.8
PBX1-215ENST00000559240 LOC105371045A0A1W2PR82 267 aa26.22■■□□□ 1.79
PBX1-215ENST00000559240 SNAPC4Q5SXM2 1469 aa26.22■■□□□ 1.79
PBX1-215ENST00000559240 SYNJ2O15056 1496 aa26.16■■□□□ 1.78
PBX1-215ENST00000559240 HRCP23327 699 aa26.14■■□□□ 1.78
PBX1-215ENST00000559240 CTTNBP2Q8WZ74 1663 aa26.14■■□□□ 1.78
PBX1-215ENST00000559240 GRIN2AQ12879 1464 aa26.09■■□□□ 1.77
PBX1-215ENST00000559240 UBTFP17480 764 aaKnown RBP26.02■■□□□ 1.76
PBX1-215ENST00000559240 CEP162Q5TB80 1403 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms