RNA–Protein interactions for RNA: ENST00000621098.1

NR2E3-203, Transcript of nuclear receptor subfamily 2 group E member 3, humanhuman

TSL 1 (best) BASIC

Gene NR2E3, Length 2,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR2E3-203ENST00000621098 NISCHQ9Y2I1 1504 aa31.85■■■□□ 2.69
NR2E3-203ENST00000621098 CCDC180Q9P1Z9 1646 aa27.66■■■□□ 2.02
NR2E3-203ENST00000621098 SHROOM4Q9ULL8 1493 aa26.9■■□□□ 1.9
NR2E3-203ENST00000621098 ZCCHC6Q5VYS8 1495 aaKnown RBP26.87■■□□□ 1.89
NR2E3-203ENST00000621098 ABCC9O60706 1549 aa26.72■■□□□ 1.87
NR2E3-203ENST00000621098 SUPT5HO00267 1087 aaKnown RBP26.53■■□□□ 1.84
NR2E3-203ENST00000621098 DCAF8L2P0C7V8 631 aa26.34■■□□□ 1.81
NR2E3-203ENST00000621098 DCAF1Q9Y4B6 1507 aa26.24■■□□□ 1.79
NR2E3-203ENST00000621098 MYO15BQ96JP2 1530 aa26.19■■□□□ 1.78
NR2E3-203ENST00000621098 CHIC1Q5VXU3 224 aa26.13■■□□□ 1.77
NR2E3-203ENST00000621098 HRCP23327 699 aa26.02■■□□□ 1.76
NR2E3-203ENST00000621098 NACADO15069 1562 aa25.9■■□□□ 1.74
NR2E3-203ENST00000621098 RB1CC1Q8TDY2 1594 aa25.8■■□□□ 1.72
NR2E3-203ENST00000621098 PCGF6Q9BYE7 350 aa25.59■■□□□ 1.69
NR2E3-203ENST00000621098 SCRIBQ14160 1630 aa25.41■■□□□ 1.66
NR2E3-203ENST00000621098 UNC13AQ9UPW8 1703 aa25.38■■□□□ 1.65
NR2E3-203ENST00000621098 LOC105371045A0A1W2PR82 267 aa25.23■■□□□ 1.63
NR2E3-203ENST00000621098 PPARGC1BQ86YN6 1023 aaKnown RBP25.23■■□□□ 1.63
NR2E3-203ENST00000621098 TRIM26Q12899 539 aaPredicted RBP25.16■■□□□ 1.62
NR2E3-203ENST00000621098 PABPN1Q86U42 306 aaKnown RBP eCLIP25.14■■□□□ 1.61
NR2E3-203ENST00000621098 BICRAQ9NZM4 1560 aa25.12■■□□□ 1.61
NR2E3-203ENST00000621098 RSF1Q96T23 1441 aaPredicted RBP25.08■■□□□ 1.6
NR2E3-203ENST00000621098 ZEB1P37275 1124 aaPredicted RBP24.87■■□□□ 1.57
NR2E3-203ENST00000621098 TRIM41Q8WV44 630 aa24.77■■□□□ 1.56
NR2E3-203ENST00000621098 CECR2Q9BXF3 1484 aa24.77■■□□□ 1.56
NR2E3-203ENST00000621098 MROH2BQ7Z745 1585 aa24.68■■□□□ 1.54
NR2E3-203ENST00000621098 WIZO95785 1651 aa24.53■■□□□ 1.52
NR2E3-203ENST00000621098 BAZ1AQ9NRL2 1556 aaPredicted RBP24.52■■□□□ 1.52
NR2E3-203ENST00000621098 FAM9AQ8IZU1 332 aaPredicted RBP24.46■■□□□ 1.51
NR2E3-203ENST00000621098 EIF4G1Q04637 1599 aaKnown RBP24.43■■□□□ 1.5
NR2E3-203ENST00000621098 SMARCA4P51532 1647 aa24.34■■□□□ 1.49
NR2E3-203ENST00000621098 PELP1Q8IZL8 1130 aaKnown RBP24.31■■□□□ 1.48
NR2E3-203ENST00000621098 TOP2AP11388 1531 aaKnown RBP24.22■■□□□ 1.47
NR2E3-203ENST00000621098 DNAJC5BQ9UF47 199 aa24.17■■□□□ 1.46
NR2E3-203ENST00000621098 CC2D2AQ9P2K1 1620 aa24.17■■□□□ 1.46
NR2E3-203ENST00000621098 SCAF1Q9H7N4 1312 aaKnown RBP24.14■■□□□ 1.46
NR2E3-203ENST00000621098 EHMT2Q96KQ7 1210 aa24.12■■□□□ 1.45
NR2E3-203ENST00000621098 WRNQ14191 1432 aaPredicted RBP eCLIP24.11■■□□□ 1.45
NR2E3-203ENST00000621098 ATAD2BQ9ULI0 1458 aa24.06■■□□□ 1.44
NR2E3-203ENST00000621098 CCDC88BA6NC98 1476 aa24.05■■□□□ 1.44
NR2E3-203ENST00000621098 SMARCA2P51531 1590 aa24.04■■□□□ 1.44
NR2E3-203ENST00000621098 PEG3Q9GZU2 1588 aa24.02■■□□□ 1.44
NR2E3-203ENST00000621098 ABCC8Q09428 1581 aa23.97■■□□□ 1.43
NR2E3-203ENST00000621098 CCER1Q8TC90 406 aaPredicted RBP23.95■■□□□ 1.42
NR2E3-203ENST00000621098 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.94■■□□□ 1.42
NR2E3-203ENST00000621098 NCAPD3P42695 1498 aa23.93■■□□□ 1.42
NR2E3-203ENST00000621098 CEP162Q5TB80 1403 aa23.92■■□□□ 1.42
NR2E3-203ENST00000621098 EEA1Q15075 1411 aa23.91■■□□□ 1.42
NR2E3-203ENST00000621098 TNIKQ9UKE5 1360 aa23.88■■□□□ 1.41
NR2E3-203ENST00000621098 BAZ1BQ9UIG0 1483 aaKnown RBP23.86■■□□□ 1.41
NR2E3-203ENST00000621098 ACIN1Q9UKV3 1341 aaKnown RBP23.85■■□□□ 1.41
NR2E3-203ENST00000621098 HMGXB3Q12766 1538 aa23.81■■□□□ 1.4
NR2E3-203ENST00000621098 SOGA1O94964 1423 aa23.77■■□□□ 1.4
NR2E3-203ENST00000621098 DIEXFQ68CQ4 756 aaKnown RBP23.74■■□□□ 1.39
NR2E3-203ENST00000621098 NEUROD1Q13562 356 aa23.71■■□□□ 1.39
NR2E3-203ENST00000621098 GOLGA3Q08378 1498 aa23.7■■□□□ 1.39
NR2E3-203ENST00000621098 CENPBP07199 599 aaPredicted RBP23.68■■□□□ 1.38
NR2E3-203ENST00000621098 CSRNP3Q8WYN3 585 aa23.66■■□□□ 1.38
NR2E3-203ENST00000621098 RUSC2Q8N2Y8 1516 aa23.63■■□□□ 1.37
NR2E3-203ENST00000621098 KIF21BO75037 1637 aa23.61■■□□□ 1.37
NR2E3-203ENST00000621098 CEP164Q9UPV0 1460 aa23.54■■□□□ 1.36
NR2E3-203ENST00000621098 UBTFP17480 764 aaKnown RBP23.51■■□□□ 1.35
NR2E3-203ENST00000621098 ZNF316A6NFI3 1004 aaPredicted RBP23.5■■□□□ 1.35
NR2E3-203ENST00000621098 GTF3C3Q9Y5Q9 886 aa23.5■■□□□ 1.35
NR2E3-203ENST00000621098 TTBK1Q5TCY1 1321 aaPredicted RBP23.5■■□□□ 1.35
NR2E3-203ENST00000621098 SYNJ1O43426 1573 aa23.47■■□□□ 1.35
NR2E3-203ENST00000621098 VPS8Q8N3P4 1428 aa23.38■■□□□ 1.33
NR2E3-203ENST00000621098 CLIP1P30622 1438 aa23.38■■□□□ 1.33
NR2E3-203ENST00000621098 NESP48681 1621 aa23.32■■□□□ 1.32
NR2E3-203ENST00000621098 CADPSQ9ULU8 1353 aa23.29■■□□□ 1.32
NR2E3-203ENST00000621098 CFTRP13569 1480 aa23.25■■□□□ 1.31
NR2E3-203ENST00000621098 MYT1Q01538 1121 aa23.24■■□□□ 1.31
NR2E3-203ENST00000621098 RAPGEF2Q9Y4G8 1499 aa23.22■■□□□ 1.31
NR2E3-203ENST00000621098 TOP2BQ02880 1626 aa23.22■■□□□ 1.31
NR2E3-203ENST00000621098 BIVM-ERCC5R4GMW8 1640 aa23.18■■□□□ 1.3
NR2E3-203ENST00000621098 LAMC3Q9Y6N6 1575 aa23.18■■□□□ 1.3
NR2E3-203ENST00000621098 HNRNPUL2Q1KMD3 747 aaKnown RBP23.18■■□□□ 1.3
NR2E3-203ENST00000621098 ERICH3Q5RHP9 1530 aa23.15■■□□□ 1.3
NR2E3-203ENST00000621098 MIER1Q8N108 512 aa23.14■■□□□ 1.29
NR2E3-203ENST00000621098 CLSPNQ9HAW4 1339 aa23.13■■□□□ 1.29
NR2E3-203ENST00000621098 APLP2Q06481 763 aa23.12■■□□□ 1.29
NR2E3-203ENST00000621098 PRDM2Q13029 1718 aa23.1■■□□□ 1.29
NR2E3-203ENST00000621098 YTHDC1Q96MU7 727 aaKnown RBP23.06■■□□□ 1.28
NR2E3-203ENST00000621098 PRXQ9BXM0 1461 aa23.03■■□□□ 1.28
NR2E3-203ENST00000621098 KIF21AQ7Z4S6 1674 aa23.02■■□□□ 1.28
NR2E3-203ENST00000621098 CUX1P39880 1505 aa23.02■■□□□ 1.28
NR2E3-203ENST00000621098 FANCD2Q9BXW9 1451 aa23.02■■□□□ 1.28
NR2E3-203ENST00000621098 ARAP1Q96P48 1450 aa23.01■■□□□ 1.27
NR2E3-203ENST00000621098 PDS5BQ9NTI5 1447 aa23.01■■□□□ 1.27
NR2E3-203ENST00000621098 DHX57Q6P158 1386 aaKnown RBP22.98■■□□□ 1.27
NR2E3-203ENST00000621098 RRBP1Q9P2E9 1410 aaKnown RBP22.93■■□□□ 1.26
NR2E3-203ENST00000621098 CUX2O14529 1486 aa22.92■■□□□ 1.26
NR2E3-203ENST00000621098 ERCC6Q03468 1493 aa22.91■■□□□ 1.26
NR2E3-203ENST00000621098 KIF27Q86VH2 1401 aa22.87■■□□□ 1.25
NR2E3-203ENST00000621098 URB2Q14146 1524 aaKnown RBP22.79■■□□□ 1.24
NR2E3-203ENST00000621098 RANGAP1P46060 587 aaPredicted RBP22.78■■□□□ 1.24
NR2E3-203ENST00000621098 KANK4Q5T7N3 995 aaPredicted RBP22.76■■□□□ 1.23
NR2E3-203ENST00000621098 MRC2Q9UBG0 1479 aa22.76■■□□□ 1.23
NR2E3-203ENST00000621098 THOC2Q8NI27 1593 aaKnown RBP22.75■■□□□ 1.23
NR2E3-203ENST00000621098 ARHGAP35Q9NRY4 1499 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms