Protein–RNA interactions for Protein: A6NDB9

PALM3, Paralemmin-3, humanhuman

Predicted RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PALM3A6NDB9 AC009093.7-201ENST00000623853 1223 ntBASIC19.19■□□□□ 0.66
PALM3A6NDB9 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC19.19■□□□□ 0.66
PALM3A6NDB9 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.19■□□□□ 0.66
PALM3A6NDB9 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.19■□□□□ 0.66
PALM3A6NDB9 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
PALM3A6NDB9 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.19■□□□□ 0.66
PALM3A6NDB9 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PALM3A6NDB9 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PALM3A6NDB9 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PALM3A6NDB9 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PALM3A6NDB9 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PALM3A6NDB9 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PALM3A6NDB9 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PALM3A6NDB9 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC19.19■□□□□ 0.66
PALM3A6NDB9 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PALM3A6NDB9 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PALM3A6NDB9 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PALM3A6NDB9 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PALM3A6NDB9 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PALM3A6NDB9 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PALM3A6NDB9 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PALM3A6NDB9 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PALM3A6NDB9 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PALM3A6NDB9 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PALM3A6NDB9 PRORSD1P-202ENST00000563365 2154 ntBASIC19.18■□□□□ 0.66
PALM3A6NDB9 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PALM3A6NDB9 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PALM3A6NDB9 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.18■□□□□ 0.66
PALM3A6NDB9 AC142381.1-201ENST00000426099 345 ntBASIC19.18■□□□□ 0.66
PALM3A6NDB9 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PALM3A6NDB9 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.18■□□□□ 0.66
PALM3A6NDB9 HLA-J-203ENST00000494367 1087 ntBASIC19.18■□□□□ 0.66
PALM3A6NDB9 IGHV3-62-201ENST00000520057 340 ntBASIC19.18■□□□□ 0.66
PALM3A6NDB9 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PALM3A6NDB9 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PALM3A6NDB9 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.18■□□□□ 0.66
PALM3A6NDB9 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PALM3A6NDB9 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.18■□□□□ 0.66
PALM3A6NDB9 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PALM3A6NDB9 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.18■□□□□ 0.66
PALM3A6NDB9 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PALM3A6NDB9 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PALM3A6NDB9 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PALM3A6NDB9 OR6D1P-202ENST00000641007 5290 ntBASIC19.18■□□□□ 0.66
PALM3A6NDB9 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PALM3A6NDB9 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PALM3A6NDB9 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC19.17■□□□□ 0.66
PALM3A6NDB9 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
PALM3A6NDB9 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC19.17■□□□□ 0.66
PALM3A6NDB9 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.17■□□□□ 0.66
PALM3A6NDB9 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PALM3A6NDB9 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
PALM3A6NDB9 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PALM3A6NDB9 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PALM3A6NDB9 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC19.17■□□□□ 0.66
PALM3A6NDB9 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PALM3A6NDB9 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
PALM3A6NDB9 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PALM3A6NDB9 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19.17■□□□□ 0.66
PALM3A6NDB9 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PALM3A6NDB9 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC19.17■□□□□ 0.66
PALM3A6NDB9 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.17■□□□□ 0.66
PALM3A6NDB9 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.17■□□□□ 0.66
PALM3A6NDB9 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PALM3A6NDB9 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PALM3A6NDB9 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.17■□□□□ 0.66
PALM3A6NDB9 PRYP6-201ENST00000514804 343 ntBASIC19.17■□□□□ 0.66
PALM3A6NDB9 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC19.17■□□□□ 0.66
PALM3A6NDB9 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PALM3A6NDB9 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.17■□□□□ 0.66
PALM3A6NDB9 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PALM3A6NDB9 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PALM3A6NDB9 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PALM3A6NDB9 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
PALM3A6NDB9 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
PALM3A6NDB9 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
PALM3A6NDB9 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
PALM3A6NDB9 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PALM3A6NDB9 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.17■□□□□ 0.66
PALM3A6NDB9 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PALM3A6NDB9 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.16■□□□□ 0.66
PALM3A6NDB9 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PALM3A6NDB9 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PALM3A6NDB9 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PALM3A6NDB9 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC19.16■□□□□ 0.66
PALM3A6NDB9 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PALM3A6NDB9 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PALM3A6NDB9 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.16■□□□□ 0.66
PALM3A6NDB9 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PALM3A6NDB9 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PALM3A6NDB9 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC19.16■□□□□ 0.66
PALM3A6NDB9 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.16■□□□□ 0.66
PALM3A6NDB9 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.16■□□□□ 0.66
PALM3A6NDB9 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PALM3A6NDB9 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PALM3A6NDB9 AC105233.2-201ENST00000523697 349 ntBASIC19.16■□□□□ 0.66
PALM3A6NDB9 AF228730.5-201ENST00000530288 346 ntBASIC19.16■□□□□ 0.66
PALM3A6NDB9 SLC25A39P2-201ENST00000537614 270 ntBASIC19.16■□□□□ 0.66
PALM3A6NDB9 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.16■□□□□ 0.66
PALM3A6NDB9 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms