RNA–Protein interactions for RNA: ENST00000274063.4

SFRP2-201, Transcript of secreted frizzled related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFRP2, Length 2,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFRP2-201ENST00000274063 NISCHQ9Y2I1 1504 aa38.43■■■■□ 3.74
SFRP2-201ENST00000274063 CCDC180Q9P1Z9 1646 aa33.77■■■■□ 3
SFRP2-201ENST00000274063 ABCC9O60706 1549 aa32.32■■■□□ 2.76
SFRP2-201ENST00000274063 ZCCHC6Q5VYS8 1495 aaKnown RBP32.19■■■□□ 2.74
SFRP2-201ENST00000274063 DCAF8L2P0C7V8 631 aa31.87■■■□□ 2.69
SFRP2-201ENST00000274063 DCAF1Q9Y4B6 1507 aa31.75■■■□□ 2.67
SFRP2-201ENST00000274063 MYO15BQ96JP2 1530 aa31.55■■■□□ 2.64
SFRP2-201ENST00000274063 NACADO15069 1562 aa31.51■■■□□ 2.64
SFRP2-201ENST00000274063 RB1CC1Q8TDY2 1594 aa31.37■■■□□ 2.61
SFRP2-201ENST00000274063 SHROOM4Q9ULL8 1493 aa31.03■■■□□ 2.56
SFRP2-201ENST00000274063 SCRIBQ14160 1630 aa30.99■■■□□ 2.55
SFRP2-201ENST00000274063 UNC13AQ9UPW8 1703 aa30.84■■■□□ 2.53
SFRP2-201ENST00000274063 BICRAQ9NZM4 1560 aa30.46■■■□□ 2.47
SFRP2-201ENST00000274063 PABPN1Q86U42 306 aaKnown RBP eCLIP30.36■■■□□ 2.45
SFRP2-201ENST00000274063 CECR2Q9BXF3 1484 aa29.91■■■□□ 2.38
SFRP2-201ENST00000274063 BAZ1AQ9NRL2 1556 aaPredicted RBP29.71■■■□□ 2.35
SFRP2-201ENST00000274063 MROH2BQ7Z745 1585 aa29.69■■■□□ 2.34
SFRP2-201ENST00000274063 SMARCA4P51532 1647 aa29.67■■■□□ 2.34
SFRP2-201ENST00000274063 RSF1Q96T23 1441 aaPredicted RBP29.62■■■□□ 2.33
SFRP2-201ENST00000274063 SUPT5HO00267 1087 aaKnown RBP29.61■■■□□ 2.33
SFRP2-201ENST00000274063 EIF4G1Q04637 1599 aaKnown RBP29.57■■■□□ 2.32
SFRP2-201ENST00000274063 WIZO95785 1651 aa29.46■■■□□ 2.31
SFRP2-201ENST00000274063 PEG3Q9GZU2 1588 aa29.31■■■□□ 2.28
SFRP2-201ENST00000274063 CC2D2AQ9P2K1 1620 aa29.26■■■□□ 2.27
SFRP2-201ENST00000274063 ATAD2BQ9ULI0 1458 aa29.26■■■□□ 2.27
SFRP2-201ENST00000274063 SMARCA2P51531 1590 aa29.23■■■□□ 2.27
SFRP2-201ENST00000274063 TOP2AP11388 1531 aaKnown RBP29.09■■■□□ 2.25
SFRP2-201ENST00000274063 BAZ1BQ9UIG0 1483 aaKnown RBP29.07■■■□□ 2.24
SFRP2-201ENST00000274063 NCAPD3P42695 1498 aa29.07■■■□□ 2.24
SFRP2-201ENST00000274063 HMGXB3Q12766 1538 aa29.02■■■□□ 2.24
SFRP2-201ENST00000274063 DNAJC5BQ9UF47 199 aa28.91■■■□□ 2.22
SFRP2-201ENST00000274063 CCDC88BA6NC98 1476 aa28.79■■■□□ 2.2
SFRP2-201ENST00000274063 CFTRP13569 1480 aa28.31■■■□□ 2.12
SFRP2-201ENST00000274063 CADPSQ9ULU8 1353 aa28.29■■■□□ 2.12
SFRP2-201ENST00000274063 NESP48681 1621 aa28.25■■■□□ 2.11
SFRP2-201ENST00000274063 PRDM2Q13029 1718 aa28.24■■■□□ 2.11
SFRP2-201ENST00000274063 LAMC3Q9Y6N6 1575 aa28.19■■■□□ 2.1
SFRP2-201ENST00000274063 CHIC1Q5VXU3 224 aa28.08■■■□□ 2.09
SFRP2-201ENST00000274063 ABCC8Q09428 1581 aa28.08■■■□□ 2.09
SFRP2-201ENST00000274063 FANCD2Q9BXW9 1451 aa28■■■□□ 2.07
SFRP2-201ENST00000274063 KIF21AQ7Z4S6 1674 aa27.96■■■□□ 2.07
SFRP2-201ENST00000274063 PDS5BQ9NTI5 1447 aa27.94■■■□□ 2.06
SFRP2-201ENST00000274063 WRNQ14191 1432 aaPredicted RBP eCLIP27.89■■■□□ 2.06
SFRP2-201ENST00000274063 CEP164Q9UPV0 1460 aa27.87■■■□□ 2.05
SFRP2-201ENST00000274063 SYNJ1O43426 1573 aa27.86■■■□□ 2.05
SFRP2-201ENST00000274063 TRIM41Q8WV44 630 aa27.85■■■□□ 2.05
SFRP2-201ENST00000274063 CUX1P39880 1505 aa27.79■■■□□ 2.04
SFRP2-201ENST00000274063 TOP2BQ02880 1626 aa27.76■■■□□ 2.03
SFRP2-201ENST00000274063 BIVM-ERCC5R4GMW8 1640 aa27.75■■■□□ 2.03
SFRP2-201ENST00000274063 ERCC6Q03468 1493 aa27.74■■■□□ 2.03
SFRP2-201ENST00000274063 URB2Q14146 1524 aaKnown RBP27.69■■■□□ 2.02
SFRP2-201ENST00000274063 DNMBPQ6XZF7 1577 aa27.68■■■□□ 2.02
SFRP2-201ENST00000274063 TOPBP1Q92547 1522 aa27.65■■■□□ 2.02
SFRP2-201ENST00000274063 MRC2Q9UBG0 1479 aa27.63■■■□□ 2.01
SFRP2-201ENST00000274063 THOC2Q8NI27 1593 aaKnown RBP27.59■■■□□ 2.01
SFRP2-201ENST00000274063 FGD5Q6ZNL6 1462 aa27.55■■■□□ 2
SFRP2-201ENST00000274063 WDR62O43379 1518 aa27.53■■■□□ 2
SFRP2-201ENST00000274063 POLA1P09884 1462 aaPredicted RBP27.49■■□□□ 1.99
SFRP2-201ENST00000274063 SOGA1O94964 1423 aa27.42■■□□□ 1.98
SFRP2-201ENST00000274063 RAD54L2Q9Y4B4 1467 aa27.39■■□□□ 1.98
SFRP2-201ENST00000274063 RUSC2Q8N2Y8 1516 aa27.36■■□□□ 1.97
SFRP2-201ENST00000274063 FAM9AQ8IZU1 332 aaPredicted RBP27.35■■□□□ 1.97
SFRP2-201ENST00000274063 CUX2O14529 1486 aa27.34■■□□□ 1.97
SFRP2-201ENST00000274063 TARBP1Q13395 1621 aaKnown RBP27.31■■□□□ 1.96
SFRP2-201ENST00000274063 WDR97A6NE52 1622 aa27.3■■□□□ 1.96
SFRP2-201ENST00000274063 ABCA10Q8WWZ4 1543 aa27.28■■□□□ 1.96
SFRP2-201ENST00000274063 EEA1Q15075 1411 aa27.21■■□□□ 1.95
SFRP2-201ENST00000274063 KIF27Q86VH2 1401 aa27.21■■□□□ 1.95
SFRP2-201ENST00000274063 IFT140Q96RY7 1462 aa27.21■■□□□ 1.95
SFRP2-201ENST00000274063 TDRD9Q8NDG6 1382 aaKnown RBP27.15■■□□□ 1.94
SFRP2-201ENST00000274063 ABCA5Q8WWZ7 1642 aa27.14■■□□□ 1.94
SFRP2-201ENST00000274063 ZNF608Q9ULD9 1512 aaPredicted RBP27.13■■□□□ 1.93
SFRP2-201ENST00000274063 CSRNP3Q8WYN3 585 aa27.11■■□□□ 1.93
SFRP2-201ENST00000274063 AQRO60306 1485 aaKnown RBP eCLIP27.07■■□□□ 1.92
SFRP2-201ENST00000274063 GAPVD1Q14C86 1478 aa27.07■■□□□ 1.92
SFRP2-201ENST00000274063 EIF4G3O43432 1585 aaKnown RBP27.05■■□□□ 1.92
SFRP2-201ENST00000274063 PBRM1Q86U86 1689 aa27.03■■□□□ 1.92
SFRP2-201ENST00000274063 IGF1RP08069 1367 aa27.02■■□□□ 1.92
SFRP2-201ENST00000274063 LOC105371045A0A1W2PR82 267 aa27.01■■□□□ 1.91
SFRP2-201ENST00000274063 EHMT2Q96KQ7 1210 aa27.01■■□□□ 1.91
SFRP2-201ENST00000274063 ERICH3Q5RHP9 1530 aa26.96■■□□□ 1.91
SFRP2-201ENST00000274063 KIF21BO75037 1637 aa26.95■■□□□ 1.9
SFRP2-201ENST00000274063 PRXQ9BXM0 1461 aa26.93■■□□□ 1.9
SFRP2-201ENST00000274063 GRIN2BQ13224 1484 aa26.91■■□□□ 1.9
SFRP2-201ENST00000274063 CUL7Q14999 1698 aa26.91■■□□□ 1.9
SFRP2-201ENST00000274063 RAPGEF2Q9Y4G8 1499 aa26.88■■□□□ 1.89
SFRP2-201ENST00000274063 CARMIL1Q5VZK9 1371 aa26.87■■□□□ 1.89
SFRP2-201ENST00000274063 GOLGA3Q08378 1498 aa26.85■■□□□ 1.89
SFRP2-201ENST00000274063 SNAPC4Q5SXM2 1469 aa26.82■■□□□ 1.88
SFRP2-201ENST00000274063 ADAMTS12P58397 1594 aa26.81■■□□□ 1.88
SFRP2-201ENST00000274063 MAGI1Q96QZ7 1491 aaPredicted RBP26.75■■□□□ 1.87
SFRP2-201ENST00000274063 FHAD1B1AJZ9 1412 aa26.75■■□□□ 1.87
SFRP2-201ENST00000274063 UBTFP17480 764 aaKnown RBP26.73■■□□□ 1.87
SFRP2-201ENST00000274063 TNIKQ9UKE5 1360 aa26.65■■□□□ 1.86
SFRP2-201ENST00000274063 SYNJ2O15056 1496 aa26.65■■□□□ 1.86
SFRP2-201ENST00000274063 GRIN2AQ12879 1464 aa26.61■■□□□ 1.85
SFRP2-201ENST00000274063 CTTNBP2Q8WZ74 1663 aa26.59■■□□□ 1.85
SFRP2-201ENST00000274063 FBLN2P98095 1184 aa26.59■■□□□ 1.85
SFRP2-201ENST00000274063 CHMP7Q8WUX9 453 aaPredicted RBP26.58■■□□□ 1.85
SFRP2-201ENST00000274063 CHD1O14646 1710 aa26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 143.9 ms