RNA–Protein interactions for RNA: ENST00000550559.5

TSFM-210, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 5 BASIC

Gene TSFM, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-210ENST00000550559 NISCHQ9Y2I1 1504 aa40.32■■■■■ 4.04
TSFM-210ENST00000550559 CCDC180Q9P1Z9 1646 aa36■■■■□ 3.35
TSFM-210ENST00000550559 ABCC9O60706 1549 aa35.37■■■■□ 3.25
TSFM-210ENST00000550559 RB1CC1Q8TDY2 1594 aa33.99■■■■□ 3.03
TSFM-210ENST00000550559 NACADO15069 1562 aa33.89■■■■□ 3.02
TSFM-210ENST00000550559 DCAF8L2P0C7V8 631 aa33.74■■■□□ 2.99
TSFM-210ENST00000550559 MYO15BQ96JP2 1530 aa33.64■■■□□ 2.98
TSFM-210ENST00000550559 ZCCHC6Q5VYS8 1495 aaKnown RBP33.56■■■□□ 2.96
TSFM-210ENST00000550559 DCAF1Q9Y4B6 1507 aa33.4■■■□□ 2.94
TSFM-210ENST00000550559 UNC13AQ9UPW8 1703 aa33.12■■■□□ 2.89
TSFM-210ENST00000550559 PABPN1Q86U42 306 aaKnown RBP eCLIP32.97■■■□□ 2.87
TSFM-210ENST00000550559 BICRAQ9NZM4 1560 aa32.88■■■□□ 2.85
TSFM-210ENST00000550559 SCRIBQ14160 1630 aa32.77■■■□□ 2.84
TSFM-210ENST00000550559 SHROOM4Q9ULL8 1493 aa32.67■■■□□ 2.82
TSFM-210ENST00000550559 DNAJC5BQ9UF47 199 aa32.56■■■□□ 2.8
TSFM-210ENST00000550559 EIF4G1Q04637 1599 aaKnown RBP32.08■■■□□ 2.73
TSFM-210ENST00000550559 CC2D2AQ9P2K1 1620 aa31.99■■■□□ 2.71
TSFM-210ENST00000550559 CECR2Q9BXF3 1484 aa31.84■■■□□ 2.69
TSFM-210ENST00000550559 SMARCA4P51532 1647 aa31.35■■■□□ 2.61
TSFM-210ENST00000550559 BAZ1AQ9NRL2 1556 aaPredicted RBP31.31■■■□□ 2.6
TSFM-210ENST00000550559 NCAPD3P42695 1498 aa31.25■■■□□ 2.59
TSFM-210ENST00000550559 SMARCA2P51531 1590 aa31.23■■■□□ 2.59
TSFM-210ENST00000550559 ATAD2BQ9ULI0 1458 aa31.22■■■□□ 2.59
TSFM-210ENST00000550559 HMGXB3Q12766 1538 aa31.12■■■□□ 2.57
TSFM-210ENST00000550559 PEG3Q9GZU2 1588 aa31.05■■■□□ 2.56
TSFM-210ENST00000550559 MROH2BQ7Z745 1585 aa31.04■■■□□ 2.56
TSFM-210ENST00000550559 BAZ1BQ9UIG0 1483 aaKnown RBP30.99■■■□□ 2.55
TSFM-210ENST00000550559 WIZO95785 1651 aa30.68■■■□□ 2.5
TSFM-210ENST00000550559 RSF1Q96T23 1441 aaPredicted RBP30.61■■■□□ 2.49
TSFM-210ENST00000550559 ERCC6Q03468 1493 aa30.57■■■□□ 2.48
TSFM-210ENST00000550559 NESP48681 1621 aa30.51■■■□□ 2.47
TSFM-210ENST00000550559 LAMC3Q9Y6N6 1575 aa30.49■■■□□ 2.47
TSFM-210ENST00000550559 TOP2AP11388 1531 aaKnown RBP30.41■■■□□ 2.46
TSFM-210ENST00000550559 CUX2O14529 1486 aa30.34■■■□□ 2.45
TSFM-210ENST00000550559 CADPSQ9ULU8 1353 aa30.33■■■□□ 2.45
TSFM-210ENST00000550559 PDS5BQ9NTI5 1447 aa30.3■■■□□ 2.44
TSFM-210ENST00000550559 KIF21AQ7Z4S6 1674 aa30.17■■■□□ 2.42
TSFM-210ENST00000550559 THOC2Q8NI27 1593 aaKnown RBP30.15■■■□□ 2.42
TSFM-210ENST00000550559 CFTRP13569 1480 aa30.1■■■□□ 2.41
TSFM-210ENST00000550559 CCDC88BA6NC98 1476 aa30■■■□□ 2.39
TSFM-210ENST00000550559 MRC2Q9UBG0 1479 aa29.99■■■□□ 2.39
TSFM-210ENST00000550559 CEP164Q9UPV0 1460 aa29.99■■■□□ 2.39
TSFM-210ENST00000550559 FANCD2Q9BXW9 1451 aa29.99■■■□□ 2.39
TSFM-210ENST00000550559 WDR62O43379 1518 aa29.88■■■□□ 2.37
TSFM-210ENST00000550559 PRDM2Q13029 1718 aa29.87■■■□□ 2.37
TSFM-210ENST00000550559 URB2Q14146 1524 aaKnown RBP29.67■■■□□ 2.34
TSFM-210ENST00000550559 SUPT5HO00267 1087 aaKnown RBP29.65■■■□□ 2.34
TSFM-210ENST00000550559 DNAJC5Q9H3Z4 198 aa29.59■■■□□ 2.33
TSFM-210ENST00000550559 ABCC8Q09428 1581 aa29.52■■■□□ 2.32
TSFM-210ENST00000550559 TOPBP1Q92547 1522 aa29.47■■■□□ 2.31
TSFM-210ENST00000550559 DNMBPQ6XZF7 1577 aa29.44■■■□□ 2.3
TSFM-210ENST00000550559 IFT140Q96RY7 1462 aa29.38■■■□□ 2.29
TSFM-210ENST00000550559 POLA1P09884 1462 aaPredicted RBP29.21■■■□□ 2.27
TSFM-210ENST00000550559 ZNF608Q9ULD9 1512 aaPredicted RBP29.19■■■□□ 2.26
TSFM-210ENST00000550559 TARBP1Q13395 1621 aaKnown RBP29.15■■■□□ 2.26
TSFM-210ENST00000550559 CUX1P39880 1505 aa29.15■■■□□ 2.26
TSFM-210ENST00000550559 EIF4G3O43432 1585 aaKnown RBP29.11■■■□□ 2.25
TSFM-210ENST00000550559 FGD5Q6ZNL6 1462 aa29.1■■■□□ 2.25
TSFM-210ENST00000550559 SOGA1O94964 1423 aa29.08■■■□□ 2.25
TSFM-210ENST00000550559 RAD54L2Q9Y4B4 1467 aa29.04■■■□□ 2.24
TSFM-210ENST00000550559 AQRO60306 1485 aaKnown RBP eCLIP29■■■□□ 2.231e-6■■■■■ 37.7
TSFM-210ENST00000550559 OSCARQ8IYS5 282 aa29■■■□□ 2.23
TSFM-210ENST00000550559 WDR97A6NE52 1622 aa29■■■□□ 2.23
TSFM-210ENST00000550559 TDRD9Q8NDG6 1382 aaKnown RBP28.92■■■□□ 2.22
TSFM-210ENST00000550559 WRNQ14191 1432 aaPredicted RBP eCLIP28.92■■■□□ 2.22
TSFM-210ENST00000550559 TOP2BQ02880 1626 aa28.87■■■□□ 2.21
TSFM-210ENST00000550559 BIVM-ERCC5R4GMW8 1640 aa28.86■■■□□ 2.21
TSFM-210ENST00000550559 ABCA10Q8WWZ4 1543 aa28.84■■■□□ 2.21
TSFM-210ENST00000550559 SYNJ1O43426 1573 aa28.81■■■□□ 2.2
TSFM-210ENST00000550559 GRIN2BQ13224 1484 aa28.8■■■□□ 2.2
TSFM-210ENST00000550559 SNAPC4Q5SXM2 1469 aa28.78■■■□□ 2.2
TSFM-210ENST00000550559 MAGI1Q96QZ7 1491 aaPredicted RBP28.77■■■□□ 2.2
TSFM-210ENST00000550559 CHD1O14646 1710 aa28.77■■■□□ 2.2
TSFM-210ENST00000550559 GAPVD1Q14C86 1478 aa28.76■■■□□ 2.19
TSFM-210ENST00000550559 FBLN2P98095 1184 aa28.73■■■□□ 2.19
TSFM-210ENST00000550559 ABCA5Q8WWZ7 1642 aa28.72■■■□□ 2.19
TSFM-210ENST00000550559 PBRM1Q86U86 1689 aa28.7■■■□□ 2.18
TSFM-210ENST00000550559 CHMP7Q8WUX9 453 aaPredicted RBP28.64■■■□□ 2.18
TSFM-210ENST00000550559 SYNJ2O15056 1496 aa28.64■■■□□ 2.17
TSFM-210ENST00000550559 RIMBP3CA6NJZ7 1639 aa28.54■■■□□ 2.16
TSFM-210ENST00000550559 RIMBP3BA6NNM3 1639 aa28.54■■■□□ 2.16
TSFM-210ENST00000550559 RIMBP3Q9UFD9 1639 aa28.54■■■□□ 2.16
TSFM-210ENST00000550559 ARHGEF11O15085 1522 aa28.53■■■□□ 2.16
TSFM-210ENST00000550559 TRIM41Q8WV44 630 aa28.53■■■□□ 2.16
TSFM-210ENST00000550559 ERICH3Q5RHP9 1530 aa28.5■■■□□ 2.15
TSFM-210ENST00000550559 ADAMTS12P58397 1594 aa28.48■■■□□ 2.15
TSFM-210ENST00000550559 CLASP1Q7Z460 1538 aa28.47■■■□□ 2.15
TSFM-210ENST00000550559 FHAD1B1AJZ9 1412 aa28.43■■■□□ 2.14
TSFM-210ENST00000550559 GRIN2AQ12879 1464 aa28.41■■■□□ 2.14
TSFM-210ENST00000550559 KIF27Q86VH2 1401 aa28.35■■■□□ 2.13
TSFM-210ENST00000550559 NUP160Q12769 1436 aa28.3■■■□□ 2.12
TSFM-210ENST00000550559 ARAP1Q96P48 1450 aa28.27■■■□□ 2.12
TSFM-210ENST00000550559 CEP170Q5SW79 1584 aa28.25■■■□□ 2.11
TSFM-210ENST00000550559 CYB5RLQ6IPT4 315 aa28.24■■■□□ 2.11
TSFM-210ENST00000550559 CUL7Q14999 1698 aa28.21■■■□□ 2.11
TSFM-210ENST00000550559 IGF1RP08069 1367 aa28.2■■■□□ 2.1
TSFM-210ENST00000550559 SHROOM2Q13796 1616 aa28.1■■■□□ 2.09
TSFM-210ENST00000550559 CARMIL1Q5VZK9 1371 aa28.06■■■□□ 2.08
TSFM-210ENST00000550559 RUSC2Q8N2Y8 1516 aa28.06■■■□□ 2.08
TSFM-210ENST00000550559 ERCC6L2Q5T890 1561 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms