Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TREML4Q6UXN2 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TREML4Q6UXN2 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TREML4Q6UXN2 AC125634.1-201ENST00000438758 1403 ntBASIC13.75□□□□□ -0.21
TREML4Q6UXN2 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC13.75□□□□□ -0.21
TREML4Q6UXN2 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TREML4Q6UXN2 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TREML4Q6UXN2 AC092068.3-201ENST00000587894 2016 ntBASIC13.75□□□□□ -0.21
TREML4Q6UXN2 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC13.75□□□□□ -0.21
TREML4Q6UXN2 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TREML4Q6UXN2 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
TREML4Q6UXN2 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TREML4Q6UXN2 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TREML4Q6UXN2 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.75□□□□□ -0.21
TREML4Q6UXN2 METTL26-205ENST00000397666 726 ntTSL 2 BASIC13.75□□□□□ -0.21
TREML4Q6UXN2 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
TREML4Q6UXN2 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC13.75□□□□□ -0.21
TREML4Q6UXN2 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC13.75□□□□□ -0.21
TREML4Q6UXN2 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.75□□□□□ -0.21
TREML4Q6UXN2 PAWRP1-201ENST00000451083 565 ntBASIC13.75□□□□□ -0.21
TREML4Q6UXN2 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.75□□□□□ -0.21
TREML4Q6UXN2 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC13.75□□□□□ -0.21
TREML4Q6UXN2 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.75□□□□□ -0.21
TREML4Q6UXN2 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC13.75□□□□□ -0.21
TREML4Q6UXN2 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC13.75□□□□□ -0.21
TREML4Q6UXN2 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
TREML4Q6UXN2 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TREML4Q6UXN2 TMED1-207ENST00000591695 809 ntTSL 5 BASIC13.75□□□□□ -0.21
TREML4Q6UXN2 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC13.75□□□□□ -0.21
TREML4Q6UXN2 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC13.75□□□□□ -0.21
TREML4Q6UXN2 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TREML4Q6UXN2 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TREML4Q6UXN2 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
TREML4Q6UXN2 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TREML4Q6UXN2 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TREML4Q6UXN2 AC079328.2-201ENST00000561241 3354 ntBASIC13.75□□□□□ -0.21
TREML4Q6UXN2 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TREML4Q6UXN2 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TREML4Q6UXN2 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
TREML4Q6UXN2 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TREML4Q6UXN2 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC13.75□□□□□ -0.21
TREML4Q6UXN2 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TREML4Q6UXN2 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TREML4Q6UXN2 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC13.75□□□□□ -0.21
TREML4Q6UXN2 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TREML4Q6UXN2 AC026691.1-201ENST00000602502 2017 ntBASIC13.74□□□□□ -0.21
TREML4Q6UXN2 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC13.74□□□□□ -0.21
TREML4Q6UXN2 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TREML4Q6UXN2 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TREML4Q6UXN2 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
TREML4Q6UXN2 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TREML4Q6UXN2 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TREML4Q6UXN2 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
TREML4Q6UXN2 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TREML4Q6UXN2 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC13.74□□□□□ -0.21
TREML4Q6UXN2 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
TREML4Q6UXN2 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TREML4Q6UXN2 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC13.74□□□□□ -0.21
TREML4Q6UXN2 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC13.74□□□□□ -0.21
TREML4Q6UXN2 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TREML4Q6UXN2 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TREML4Q6UXN2 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TREML4Q6UXN2 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TREML4Q6UXN2 AC096633.1-201ENST00000422446 749 ntBASIC13.74□□□□□ -0.21
TREML4Q6UXN2 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC13.74□□□□□ -0.21
TREML4Q6UXN2 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.74□□□□□ -0.21
TREML4Q6UXN2 MTCL1P1-201ENST00000446207 792 ntBASIC13.74□□□□□ -0.21
TREML4Q6UXN2 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC13.74□□□□□ -0.21
TREML4Q6UXN2 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC13.74□□□□□ -0.21
TREML4Q6UXN2 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TREML4Q6UXN2 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC13.74□□□□□ -0.21
TREML4Q6UXN2 AC124947.2-201ENST00000547118 1133 ntBASIC13.74□□□□□ -0.21
TREML4Q6UXN2 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13.74□□□□□ -0.21
TREML4Q6UXN2 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC13.74□□□□□ -0.21
TREML4Q6UXN2 AC006557.2-201ENST00000592985 1240 ntBASIC13.74□□□□□ -0.21
TREML4Q6UXN2 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
TREML4Q6UXN2 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TREML4Q6UXN2 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TREML4Q6UXN2 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC13.74□□□□□ -0.21
TREML4Q6UXN2 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
TREML4Q6UXN2 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC13.74□□□□□ -0.21
TREML4Q6UXN2 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC13.74□□□□□ -0.21
TREML4Q6UXN2 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.74□□□□□ -0.21
TREML4Q6UXN2 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TREML4Q6UXN2 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC13.74□□□□□ -0.21
TREML4Q6UXN2 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC13.74□□□□□ -0.21
TREML4Q6UXN2 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC13.74□□□□□ -0.21
TREML4Q6UXN2 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TREML4Q6UXN2 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TREML4Q6UXN2 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
TREML4Q6UXN2 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC13.73□□□□□ -0.21
TREML4Q6UXN2 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
TREML4Q6UXN2 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC13.73□□□□□ -0.21
TREML4Q6UXN2 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TREML4Q6UXN2 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
TREML4Q6UXN2 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC13.73□□□□□ -0.21
TREML4Q6UXN2 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TREML4Q6UXN2 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC13.73□□□□□ -0.21
TREML4Q6UXN2 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TREML4Q6UXN2 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms